Trimin1|156177|gw1.44.136.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156177
Unique NameTrimin1|156177|gw1.44.136.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length477
Homology
[Close]
BLAST of jgi.p|Trimin1|156177 vs. uniprot
Match: A0A836CD12_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD12_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.270e-19
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 
Query:    1 DDVNWAQRFSSLASELQVRSVLREAAPLYEHALAIREEKLGPTHPGTAQS 50
            DDVNWAQRFSSLASELQVRSVLREAAPLYEHALAIREEKLGPTHPGTAQS
Sbjct:    1 DDVNWAQRFSSLASELQVRSVLREAAPLYEHALAIREEKLGPTHPGTAQS 50
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156177 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CD12_9STRA1.270e-19100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 105..123
score: 35.79
coord: 214..234
score: 45.71
coord: 170..187
score: 49.44
coord: 249..270
score: 37.73
coord: 83..102
score: 19.5
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 258..291
e-value: 0.024
score: 23.8
coord: 342..375
e-value: 0.0031
score: 26.7
coord: 48..81
e-value: 0.29
score: 20.2
coord: 426..459
e-value: 0.059
score: 22.5
coord: 300..333
e-value: 0.52
score: 19.4
coord: 174..207
e-value: 0.0028
score: 26.9
coord: 132..165
e-value: 6.3E-4
score: 29.0
coord: 384..417
e-value: 1.5
score: 17.9
coord: 6..39
e-value: 240.0
score: 2.9
coord: 216..249
e-value: 0.091
score: 21.9
coord: 90..123
e-value: 5.3E-5
score: 32.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 216..249
score: 8.1719
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 132..165
score: 9.1454
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 174..207
score: 8.4964
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 90..123
score: 10.6204
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 258..291
score: 8.0834
NoneNo IPR availablePFAMPF13424TPR_12coord: 130..206
e-value: 4.4E-24
score: 84.6
coord: 257..332
e-value: 5.0E-21
score: 74.8
coord: 340..416
e-value: 3.4E-21
score: 75.3
coord: 58..122
e-value: 5.1E-16
score: 58.7
NoneNo IPR availablePFAMPF13374TPR_10coord: 425..465
e-value: 2.0E-13
score: 49.8
coord: 215..255
e-value: 4.1E-12
score: 45.6
coord: 5..45
e-value: 6.3E-5
score: 22.7
NoneNo IPR availablePANTHERPTHR45641:SF1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 145..319
NoneNo IPR availablePANTHERPTHR45641:SF1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 185..475
NoneNo IPR availablePANTHERPTHR45641TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 145..319
NoneNo IPR availablePANTHERPTHR45641TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 185..475
NoneNo IPR availablePANTHERPTHR45641TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 21..235
NoneNo IPR availablePANTHERPTHR45641:SF1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 21..235
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 90..122
score: 8.923716
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 202..302
e-value: 2.0E-30
score: 108.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 303..477
e-value: 1.8E-72
score: 245.1
coord: 3..193
e-value: 4.2E-71
score: 240.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 212..362
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..122
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 301..461
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 126..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_44contigContig_44:911622..913052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156177mRNA_9145Tribonema minus UTEX_B_3156 mRNAContig_44 911622..913052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156177|gw1.44.136.1 ID=Trimin1|156177|gw1.44.136.1|Name=jgi.p|Trimin1|156177|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=477bp
DDVNWAQRFSSLASELQVRSVLREAAPLYEHALAIREEKLGPTHPGTAQS
LNNLACLLQAQGVYGKAAPLYERAVSIREEKLGPKHPLTAKSFGNLALLF
KTQGDYDKAAPLYERALSIDEEVLGPTHPDTATSLNNLAMLLKAQGDYDK
AAPLYARALAIREDVLGPTHPSTATSLNNLASLLQAQGKFAEAAPLFERA
LAIREEVLGPPHPNTAKSYGNLASLLRDQGKLAEAAPLYARALAIHEEAL
GPTHPLMATSLNNLAGLLKAQGDYGKAAPLYERALAICEETLGPTHPLTA
ASLNNLAGLLEDQGKLAEAVPLYKRVLGIREERLGPTHPDTAQSLNNLAL
LLQAQGKLAEAAPLYERALAIFEEKLGPKHPHTATSLDNLACLLEAQGDY
GKAAPLYKRVLGIREERLGPTHPDTATSLNNLASLLQAQGKLAEAAPLYE
RVLAICEEKLGPKHPLTVKSRNNLAAL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf