Trimin1|155917|gw1.166.109.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|155917
Unique NameTrimin1|155917|gw1.166.109.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length53
Homology
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: A0A835Z7M4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M4_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.170e-31
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK
Sbjct:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.690e-22
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRWTY EH LFL+GL+ HGK WKKIASLIKTRTVVQIRTHAQKYFQK+AK
Sbjct:    4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAK 56          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.450e-22
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRWTY EH LFL+GL+ HGK WKKIASLIKTRTVVQIRTHAQKYFQK+AK
Sbjct:  572 ENTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAK 624          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.820e-22
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRW+Y EH LFLKGL+ HGK WKKIA LIKTRTVVQIRTHAQKYFQKLAK
Sbjct:   29 ENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAK 81          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: W7TWM0_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.560e-21
Identity = 45/53 (84.91%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRWT  EH LFLKGL+ HGK WKKIA LIKTRTVVQIRTHAQKYFQKLAK
Sbjct:   98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAK 150          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR)

HSP 1 Score: 92.8 bits (229), Expect = 1.570e-21
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRWT  EH LFL+GL+ HGK WKKIASLIK+RTVVQIRTHAQKYFQKLAK
Sbjct:  115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 167          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: A0A1Z5KDK7_FISSO (Protein MYSM1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDK7_FISSO)

HSP 1 Score: 92.8 bits (229), Expect = 8.620e-21
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRWT  EH LFL+GL+ HGK WKKIASLIK+RTVVQIRTHAQKYFQKLAK
Sbjct:   96 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 148          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: B7GAW9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW9_PHATC)

HSP 1 Score: 92.8 bits (229), Expect = 9.310e-21
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRWT  EH LFL+GL+ HGK WKKIASLIK+RTVVQIRTHAQKYFQKLAK
Sbjct:  115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 167          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: A0A6S8P3T4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8P3T4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 9.620e-21
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRWT  EH LFL+GL+ HGK WKKIASLIK+RTVVQIRTHAQKYFQKLAK
Sbjct:   43 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 95          
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Match: A0A7S1V9A3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9A3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 9.790e-21
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
            +NTGRWT  EH LFL+GL+ HGK WKKIASLIK+RTVVQIRTHAQKYFQKLAK
Sbjct:  165 ENTGRWTADEHRLFLQGLEEHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAK 217          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155917 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7M4_9STRA2.170e-31100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D7G656_ECTSI1.690e-2284.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4H1_9PHAE2.450e-2284.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U4FI15_9STRA3.820e-2284.91Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TWM0_9STRA1.560e-2184.91SANT/Myb domain protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8J9S9N3_PHATR1.570e-2183.02Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A1Z5KDK7_FISSO8.620e-2183.02Protein MYSM1 n=2 Tax=Fistulifera solaris TaxID=15... [more]
B7GAW9_PHATC9.310e-2183.02Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6S8P3T4_9STRA9.620e-2183.02Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1V9A3_9STRA9.790e-2183.02Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 2..50
e-value: 3.5E-9
score: 46.5
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..48
score: 6.539188
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 5..48
e-value: 4.5613E-7
score: 39.0958
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 3..47
e-value: 3.1E-12
score: 46.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..52
score: 17.28186
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 5..50
e-value: 1.1E-11
score: 42.9
NoneNo IPR availableGENE3D1.10.10.60coord: 5..52
e-value: 6.5E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 5..51
NoneNo IPR availablePANTHERPTHR12802:SF20MYB-LIKE PROTEIN Gcoord: 5..51
IPR017884SANT domainPROSITEPS51293SANTcoord: 1..44
score: 10.776843
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_166contigContig_166:134169..134327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|155917mRNA_13301Tribonema minus UTEX_B_3156 mRNAContig_166 134169..134327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|155917|gw1.166.109.1 ID=Trimin1|155917|gw1.166.109.1|Name=jgi.p|Trimin1|155917|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=53bp
QNTGRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQK
LAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR017884SANT_dom
IPR009057Homeobox-like_sf