Trimin1|155378|gw1.85.89.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|155378
Unique NameTrimin1|155378|gw1.85.89.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length161
Homology
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A835YK12_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK12_9STRA)

HSP 1 Score: 320 bits (820), Expect = 1.150e-110
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query:    1 GTSGCATISNPSATTVTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            GTSGCATISNPSATTVTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL
Sbjct:    1 GTSGCATISNPSATTVTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: D8LT63_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT63_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 6.810e-50
Identity = 83/155 (53.55%), Postives = 111/155 (71.61%), Query Frame = 0
Query:    4 GCATISNPSATTVTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGW 158
            GC T +NPS + V+C R GL R+GRL  C SSENC+S+S+V+ P K  +PW YA  T DA  AF  L+  +  +  +A +  V+ +  YILAEFP+KVPPGSVD VEFL++P D +  +RS +RD++F+YPLQQPVSD+G  ++RLE IRN LGW
Sbjct:  106 GCTTSTNPSYSLVSCDRTGLDRNGRLLGCSSSENCLSTSAVKVPGKLGSPWEYAMRTDDADTAFASLVHAVE-RTSEATMKIVDREGHYILAEFPSKVPPGSVDSVEFLVKPEDQIVLYRSVSRDTLFLYPLQQPVSDQGKIKERLEGIRNDLGW 259          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A7S2N0F5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0F5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.500e-40
Identity = 85/168 (50.60%), Postives = 105/168 (62.50%), Query Frame = 0
Query:    1 GTSGCATISNPSATTVTCTRVGLAR--DGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPG-----SVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            G  GC T +NPS TTVTCT    A   DGRL    ++EN VS+SSVR+P++FS PW Y TETSDA+VA+  L+  +        L  V   + Y+ A  P   PPG      +D +EFLLRP DN+  +RSA+R SVFVYPL QPVSDR SN  RL+ IR+ LGW  L
Sbjct:  125 GRRGCTTTTNPSTTTVTCTGELRANNADGRLSKISATENGVSTSSVRNPSRFSPPWTYLTETSDARVAWKSLVSAVNRVEPGGTLQIVELTDSYLHATVPTVSPPGLLGEAGLDDIEFLLRPEDNLVLYRSASRTSVFVYPLTQPVSDRNSNLKRLQKIRSILGWDEL 292          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A7S0AZ98_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZ98_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.930e-39
Identity = 80/168 (47.62%), Postives = 105/168 (62.50%), Query Frame = 0
Query:    1 GTSGCATISNPSATTVTC--TRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPG-----SVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            G  GC T +NPS T VTC         DGRL    ++ N VS+SSVR+P++FS PWNY TETSDA  A+  L++V+        +V++ D   Y+ A  P + PPG      VD +EF+L+P DN+  +RSA+R SVFVYPL QPVSD+ +N  RL  IRN+LGW  L
Sbjct:   45 GRRGCKTDTNPSRTVVTCYGELKKYNEDGRLSKISATANGVSTSSVRNPSRFSPPWNYVTETSDASAAWKSLINVVNTAEPGIEIVELTDT--YLHATAPTQSPPGLTGPAGVDDLEFILKPEDNLVLYRSASRTSVFVYPLTQPVSDQNTNLKRLNKIRNKLGWGLL 210          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A7S2XTE5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTE5_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.950e-37
Identity = 81/172 (47.09%), Postives = 110/172 (63.95%), Query Frame = 0
Query:    1 GTSGCATISNPSATTVTCTRVGLAR----DGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPG-------SVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            G  GC T +NPS T VTC  VG  R    DGRL    ++EN VS+SSVR+P++FS PW+YAT+TS+ ++A+  LL  + LQ    +++ V   + YI A  P   PPG        +D +EF+L+P DN+  +RSA+R S+FVYPL QPVSDR +N  RL+ IR  LGWA +
Sbjct:  147 GRRGCVTDTNPSRTVVTC--VGDIRSSNADGRLSRVSANENGVSTSSVRNPSRFSPPWSYATQTSNPQIAWRSLLQTLQLQ---TDILIVESTDTYIHATCPTLSPPGLFSNNEAGLDDLEFVLKPEDNLVLYRSASRTSLFVYPLTQPVSDRNTNLKRLDKIRTTLGWAMM 313          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A7S1IFF5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IFF5_9EUGL)

HSP 1 Score: 139 bits (349), Expect = 2.570e-37
Identity = 71/146 (48.63%), Postives = 102/146 (69.86%), Query Frame = 0
Query:   16 VTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            V C R G  + GRL PC SSENC +S++V SP++F  PW+Y+ +T+D   AF KL++ +  + + A L++V++   YI A  P+ VPP S+D +EFL+RP D++ + R ATR SVFVYPL Q V D+G+ +DRL +IR +LGWA L
Sbjct:  159 VECVRFGTPQ-GRLLPCSSSENCSASTAVNSPSQFVPPWDYSIDTNDPHQAFKKLVESVSEE-QGAMLIEVDESRYYIHATAPSAVPPTSLDDIEFLMRPDDSLVTHRVATRKSVFVYPLTQIVGDQGATKDRLNSIRERLGWAEL 302          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A6U3QUW3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QUW3_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.430e-37
Identity = 82/170 (48.24%), Postives = 108/170 (63.53%), Query Frame = 0
Query:    1 GTSGCATISNPSATTVTCTRVGLAR----DGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPG-----SVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            G  GC T +NPS TTVTC  +G  R    DGRL    ++EN VS+S+VR+P++FS PW + TETSDA+VA+  L++ +        +V++ D   Y+ A  P   PPG      +D +EF+LR  DNV  +RSA+R SVFVYPL QPVSDR SN  RL+ IR+ LGW  L
Sbjct:  113 GRRGCNTNTNPSTTTVTC--LGDLRKNNPDGRLTKISATENGVSTSAVRNPSRFSPPWTFLTETSDARVAWKSLINAVNTVEPGMQIVELTDT--YLHATAPTVSPPGLLGEAGLDDLEFILRVEDNVVLYRSASRTSVFVYPLTQPVSDRNSNLKRLQKIRSILGWEEL 278          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A6V1S530_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S530_HETAK)

HSP 1 Score: 137 bits (345), Expect = 5.350e-37
Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 0
Query:   14 TTVTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDD--NLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            TT++C R G  RDGRL  C  +ENC+S+S+V++P+K++APW Y T+T+    A+  L+++      +  L  V  D    Y+    PAKVPPGS D +EFLLRPAD +  +RSATRD+V VYP QQ + + G    RLE IR+ LGW  L
Sbjct:  110 TTISCRRYGTDRDGRLLGCLPNENCLSTSAVKNPSKYAAPWTYYTQTASGDSAWRALVELAETDSLNLGLKVVEKDPSRYYLHLTAPAKVPPGSTDDLEFLLRPADKIVLYRSATRDTVLVYPFQQYLPEHGQTAGRLETIRDSLGWDIL 259          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A7S2RG67_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG67_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.670e-36
Identity = 73/159 (45.91%), Postives = 102/159 (64.15%), Query Frame = 0
Query:    5 CATISNPSATTVTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLV--DVNDDNLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            C T SNP  TT TC RVGL  +GRL  C + ENC+S+SSV+S +K+S PW+Y  ET +   A+  L   +   I+ A +   DV+ + LY+    P+ VPP   D +EF+L P + +  FRSA+R SVF++PLQQPVSD G +  RL+ +R+ LGW +L
Sbjct:   74 CRTTSNPFFTTKTCYRVGLV-EGRLGKCLADENCMSTSSVQSASKYSPPWDYTPETLNPDRAWKSLKLALLQTIQGARVEAEDVSTERLYLHVTAPSAVPPAGTDDLEFVLDPKEKLVFFRSASRSSVFLFPLQQPVSDNGRHLSRLQNVRSTLGWGSL 231          
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Match: A0A1E7FHJ7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHJ7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.070e-36
Identity = 79/165 (47.88%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    1 GTSGCATISNPSATTVTCTRVGLAR--DGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPG--SVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWAAL 161
            G  GC T +NPS T VTC     +   DGRL    ++EN VS+SSV++P++FS PW+Y TET DAK A+  L   +    +   ++++ D+  Y+ A  P   PPG   VD +EFL+RP DNV  +RSA+R SVFVYPL QPVSD  SN  RL+ IR  LGW  L
Sbjct:  152 GRRGCITNTNPSRTIVTCRGDMQSNNPDGRLSKVSATENGVSTSSVKNPSRFSPPWSYLTETQDAKRAWKSLQSAVLNVDQSCQIIELTDN--YLHAIVPTTSPPGIEGVDDLEFLIRPDDNVILYRSASRTSVFVYPLTQPVSDNNSNLKRLQKIRQSLGWEEL 314          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155378 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YK12_9STRA1.150e-110100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D8LT63_ECTSI6.810e-5053.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2N0F5_9STRA3.500e-4050.60Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0AZ98_9STRA2.930e-3947.62Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2XTE5_9STRA1.950e-3747.09Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1IFF5_9EUGL2.570e-3748.63Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A6U3QUW3_9STRA3.430e-3748.24Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6V1S530_HETAK5.350e-3746.67Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2RG67_9STRA1.670e-3645.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1E7FHJ7_9STRA3.070e-3647.88Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010865Protein of unknown function DUF1499PFAMPF07386DUF1499coord: 29..156
e-value: 5.2E-16
score: 59.2
NoneNo IPR availablePANTHERPTHR34801EXPRESSED PROTEINcoord: 5..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_85contigContig_85:601720..602956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|155378mRNA_12218Tribonema minus UTEX_B_3156 mRNAContig_85 601720..602956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|155378|gw1.85.89.1 ID=Trimin1|155378|gw1.85.89.1|Name=jgi.p|Trimin1|155378|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=161bp
GTSGCATISNPSATTVTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKF
SAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAK
VPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLE
AIRNQLGWAAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010865DUF1499