Trimin1|154976|gw1.44.125.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|154976
Unique NameTrimin1|154976|gw1.44.125.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length337
Homology
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BLAST of jgi.p|Trimin1|154976 vs. uniprot
Match: A0A835YS81_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS81_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.410e-16
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    1 ACEAVIAGMRAHVSNTDVQYWGARAACNLAVNDSIKTKLSVAGA 44
            ACEAVIAGMRAHVSNTDVQYWGARAACNLAVNDSIKTKLSVAGA
Sbjct:    1 ACEAVIAGMRAHVSNTDVQYWGARAACNLAVNDSIKTKLSVAGA 44
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154976 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YS81_9STRA2.410e-16100.00Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 161..203
e-value: 67.0
score: 6.8
coord: 247..290
e-value: 130.0
score: 4.7
coord: 118..160
e-value: 160.0
score: 3.9
coord: 204..246
e-value: 93.0
score: 5.7
coord: 291..333
e-value: 11.0
score: 12.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..336
e-value: 2.2E-35
score: 124.2
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 4..72
coord: 89..249
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 214..333
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 4..72
coord: 89..249
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 214..333
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 15..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_44contigContig_44:882446..883456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|154976mRNA_9136Tribonema minus UTEX_B_3156 mRNAContig_44 882446..883456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|154976|gw1.44.125.1 ID=Trimin1|154976|gw1.44.125.1|Name=jgi.p|Trimin1|154976|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp
ACEAVIAGMRAHVSNTDVQYWGARAACNLAVNDSIKTKLSVAGACEAVVA
GMRAHLSSADVQHYGVRAVHTLPVNDIIRTKFGDVGAAEAVLLGMRAHAP
NAGVQHYGAWAVETMAVNDAIRAKLAAAGACEVVVAAMSAHVSNADVQLH
GATAVFSLAANDTNSTRLGAAGACEAVVAGMQAHVSNTDVQHYGAWAVIN
LAANATNQAKLGAAGACDAVVAGMRNHVSNAGVQHYGAWAVCTLAANNDT
NTAKLCGAGACKAVVAGMRAHISNADMQHYGARAVETMAVNDTNKAKLCA
AGACEAVVASMRAHVSDADVQHYGARAVETLAADNTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold