Trimin1|152856|gw1.109.79.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|152856
Unique Name	Trimin1\|152856\|gw1.109.79.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	83

Homology

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BLAST of jgi.p|Trimin1|152856 vs. uniprot
Match: A0A836CQK7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQK7_9STRA)

HSP 1 Score: 153 bits (386), Expect = 5.740e-47
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query:    1 IALKEAILDALKAMFGVVGSAAYEVDVLSYDTSDGAAILRIASDALVPVRAALTLKGSHGNAPIRFAVLHASPFLAALACPRF 83
            IALKEAILDALKAMFGVVGSAAYEVDVLSYDTSDGAAILRIASDALVPVRAALTLKGSHGNAPIRFAVLHASPFLAALACPRF
Sbjct:    1 IALKEAILDALKAMFGVVGSAAYEVDVLSYDTSDGAAILRIASDALVPVRAALTLKGSHGNAPIRFAVLHASPFLAALACPRF 83

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BLAST of jgi.p|Trimin1|152856 vs. uniprot
Match: A0A024TG61_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TG61_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 5.540e-5
Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 0

Query:    3 LKEAILDALKAMFGVVGSAAYEVDVLSY--DTSDGAAILRIASDALVPVRAALTLKGSHGNAPIRFAVLHASPFLAALACPRF 83
            +K  I  ++K +FG VG AA+  DVLS   DT+  AA+LR+  +++ P+  AL L     N P ++     +  L  LA PR+
Sbjct:   50 VKLQIASSIKQLFGTVGVAAHNFDVLSVVADTTTHAALLRVRQESVTPLWTALALSTKFDNFPCKYEATQVASSLVELASPRY 132

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|152856 vs. uniprot

BLAST of jgi.p|Trimin1|152856 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CQK7_9STRA	5.740e-47	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A024TG61_9STRA	5.540e-5	36.14	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038085	RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily	GENE3D	3.30.70.3250	Ribonuclease P, Pop5 subunit	coord: 2..80 e-value: 7.8E-12 score: 47.2
IPR038085	RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily	SUPERFAMILY	160350	Rnp2-like	coord: 3..77
IPR002759	RNase P subunit Pop5/Rpp14/Rnp2-like	PFAM	PF01900	RNase_P_Rpp14	coord: 3..72 e-value: 4.3E-8 score: 33.3
None	No IPR available	PANTHER	PTHR15441	RIBONUCLEASE P PROTEIN SUBUNIT P14	coord: 3..81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_109	contig	Contig_109:312073..312321 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|152856	mRNA_12995	Tribonema minus UTEX_B_3156	mRNA	Contig_109 312073..312321 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|152856|gw1.109.79.1 ID=Trimin1|152856|gw1.109.79.1|Name=jgi.p|Trimin1|152856|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=83bp
IALKEAILDALKAMFGVVGSAAYEVDVLSYDTSDGAAILRIASDALVPVR
AALTLKGSHGNAPIRFAVLHASPFLAALACPRF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038085	Rnp2-like_sf
IPR002759	Pop5/Rpp14/Rnp2-like