Trimin1|152603|gw1.8.296.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|152603
Unique NameTrimin1|152603|gw1.8.296.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length146
Homology
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BLAST of jgi.p|Trimin1|152603 vs. uniprot
Match: A0A836C8E4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E4_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.320e-38
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 
Query:    1 KHCEREGCIVLPTFGYAGAAKRFCARHRLAGMLDLKSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGRSRXXXXXXXXXXXXXXXXXXGAAEGCAARPLYGAPGAPPRVCARHRTGDMV 146
            KHCEREGCIVLPTFGYAGAAKRFCARHRLAGMLDLKSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGRSRXXXXXXXXXXXXXXXXXXGAAEGCAARPLYGAPGAPPRVCARHRTGDMV
Sbjct:    1 KHCEREGCIVLPTFGYAGAAKRFCARHRLAGMLDLKSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGRSRXXXXXXXXXXXXXXXXXXGAAEGCAARPLYGAPGAPPRVCARHRTGDMV 146
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BLAST of jgi.p|Trimin1|152603 vs. uniprot
Match: A0A836CDB4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB4_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.200e-13
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 KHCEREGCIVLPTFGYAGAAKRFCARHRLAGMLDLKSKR 39
            KHCE +GCIVLPTFG+ G AKRFC RH+L GMLDLKSKR
Sbjct:    1 KHCEFDGCIVLPTFGFQGQAKRFCGRHKLDGMLDLKSKR 39
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BLAST of jgi.p|Trimin1|152603 vs. uniprot
Match: D8LL34_ECTSI (EsV-1-7 (Partial) (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL34_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 8.530e-5
Identity = 19/38 (50.00%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    1 KHCEREGCIVLPTFGYAGAAKRFCARHRLAGMLDLKSK 38
            + CEREGC V P++G      RFCARH+L GM+D++++
Sbjct:  105 RQCEREGCNVQPSYGKVWKKPRFCARHKLPGMMDVRNR 142
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|152603 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836C8E4_9STRA2.320e-38100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CDB4_9STRA1.200e-1379.49Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D8LL34_ECTSI8.530e-550.00EsV-1-7 (Partial) (Fragment) n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 77..110
e-value: 1.7E-7
score: 31.7
coord: 3..36
e-value: 2.4E-5
score: 24.8
coord: 40..73
e-value: 2.7E-6
score: 27.8
coord: 115..146
e-value: 0.059
score: 14.0
NoneNo IPR availableGENE3D6.10.140.110coord: 54..95
e-value: 5.9E-5
score: 25.3
coord: 96..146
e-value: 1.2E-7
score: 33.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:297951..298388 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|152603mRNA_2744Tribonema minus UTEX_B_3156 mRNAContig_8 297951..298388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|152603|gw1.8.296.1 ID=Trimin1|152603|gw1.8.296.1|Name=jgi.p|Trimin1|152603|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=146bp
KHCEREGCIVLPTFGYAGAAKRFCARHRLAGMLDLKSKRCERGGCGVVPS
FGFEGGTRQFCGRHRAPGMVNLRGKRCEHPACRVSPSFGHEGEGRSRFCA
VHRAAGMVDLMHKRCGAAEGCAARPLYGAPGAPPRVCARHRTGDMV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys