Trimin1|151949|gw1.6.297.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|151949
Unique Name	Trimin1\|151949\|gw1.6.297.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	109

Homology

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: A0A835YS16_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS16_9STRA)

HSP 1 Score: 228 bits (581), Expect = 6.680e-76
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM
Sbjct:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: A0A835ZPI2_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPI2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 6.990e-61
Identity = 88/109 (80.73%), Postives = 100/109 (91.74%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            ERR+W++ ED+AI  LV  +GVKRWSL+AQ+L+ E+ G VRSGKQCRTRWLNHLDPSLR++PWT EEEQVIY+AQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM
Sbjct:    1 ERRAWSKREDDAISGLVTHYGVKRWSLIAQNLSKEVEGAVRSGKQCRTRWLNHLDPSLRRDPWTDEEEQVIYNAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: A0A7S2G8M0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8M0_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.510e-56
Identity = 85/109 (77.98%), Postives = 95/109 (87.16%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            ERR+WTR ED+AIVRLV  HG KRW+ +AQ LN EI GV RSGKQCRTRWLNHLDP+++KEPW+  EE +IYDAQ RLGNKWAEIAKLL GRTDNAIKNHWYSTMR+NM
Sbjct:   49 ERRAWTRKEDDAIVRLVKRHGTKRWACIAQELNTEIPGVFRSGKQCRTRWLNHLDPAIKKEPWSDTEEHIIYDAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNM 157

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: A0A7S2ST59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST59_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.480e-55
Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            ERR+W+R ED+AIVRLV  HG KRW+++AQ LN EI GV RSGKQCRTRWLNHLDP+++KEPW+  EE++IYDAQ+RLGNKWAEIAKLL GRTDNAIKNHWYSTMR+NM
Sbjct:   38 ERRAWSRKEDDAIVRLVNRHGTKRWAVIAQELNGEISGVFRSGKQCRTRWLNHLDPAIKKEPWSEHEERIIYDAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNM 146

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: F0Y4P7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P7_AURAN)

HSP 1 Score: 174 bits (441), Expect = 3.140e-54
Identity = 79/109 (72.48%), Postives = 95/109 (87.16%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            +RR+W+R ED+AIVRLV  HG KRW++++Q LN E+ G  RSGKQCRTRWLNHLDP++++EPW+  EE VIY+AQ RLGNKWAEIAKLL GRTDNAIKNHWYSTMR+NM
Sbjct:   25 QRRAWSRKEDDAIVRLVMTHGTKRWAVISQELNKELAGF-RSGKQCRTRWLNHLDPAIKREPWSEGEESVIYEAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNM 132

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: A0A7S3JRY5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRY5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.850e-52
Identity = 78/109 (71.56%), Postives = 96/109 (88.07%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            +R++W+  EDE IVRLV +HG KRW+L++Q LN EI+GV RSGKQCRTRWLNHLDP++R+EPW+  EE +IY+AQ+ +GNKWAEIAKLL GRTDNAIKNHWYSTMR+NM
Sbjct:   13 QRKAWSCKEDETIVRLVEKHGTKRWALISQELNSEILGVNRSGKQCRTRWLNHLDPTIRREPWSDAEENIIYNAQQTIGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNM 121

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: A0A3M6VGP6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGP6_9STRA)

HSP 1 Score: 178 bits (452), Expect = 6.530e-52
Identity = 80/109 (73.39%), Postives = 96/109 (88.07%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            ERR+WTR EDEAI+RLV E+G KRWS+++ HLN E  G  R+GKQCRTRWLNHLDP+++K+PWT+EEEQ+I DAQ RLGNKWAEI+KLL GRTDNAIKNHWYS+MR+ M
Sbjct:   20 ERRAWTRKEDEAIIRLVDEYGTKRWSVISDHLNSENHGTERTGKQCRTRWLNHLDPTIKKDPWTAEEEQIIEDAQTRLGNKWAEISKLLPGRTDNAIKNHWYSSMRRTM 128

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: H3HDP9_PHYRM (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3HDP9_PHYRM)

HSP 1 Score: 177 bits (449), Expect = 8.320e-52
Identity = 80/109 (73.39%), Postives = 96/109 (88.07%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            ERR+WTR ED+AI+RLV E+G KRWS+++ HLN E  G  R+GKQCRTRWLNHLDP+++K+PWT+EEEQVI DAQ RLGNKWAEI+KLL GRTDNAIKNHWYS+MR+ M
Sbjct:   19 ERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNGENHGTERTGKQCRTRWLNHLDPTIKKDPWTAEEEQVIEDAQTRLGNKWAEISKLLPGRTDNAIKNHWYSSMRRTM 127

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: A0A7S3ZTY8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTY8_9STRA)

HSP 1 Score: 176 bits (445), Expect = 9.970e-52
Identity = 78/109 (71.56%), Postives = 97/109 (88.99%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            +RR+W+R ED+AI+RLV +HG KRW++++Q LN E+ G  RSGKQCRTRWLNHLDP +++EPW+ +EE VIY+AQ+RLGNKWAEIAKLL GRTDNAIKNHWYSTMR+NM
Sbjct:   37 QRRAWSRKEDDAIMRLVGKHGTKRWAIISQELNKEVPGF-RSGKQCRTRWLNHLDPGIKREPWSEQEENVIYEAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNM 144

[Close]

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Match: A0A484E484_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E484_BRELC)

HSP 1 Score: 177 bits (450), Expect = 1.040e-51
Identity = 79/109 (72.48%), Postives = 96/109 (88.07%), Query Frame = 0

Query:    1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
            ERR+WTR ED+AI+RLV E+G KRWS+++ HLN E  G  R+GKQCRTRWLNHLDP+++K+PWT+EEEQ+I DAQ RLGNKWAEI+KLL GRTDNAIKNHWYS+MR+ M
Sbjct:   19 ERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNSENHGTERTGKQCRTRWLNHLDPTIKKDPWTTEEEQIIEDAQTRLGNKWAEISKLLPGRTDNAIKNHWYSSMRRTM 127

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|151949 vs. uniprot

BLAST of jgi.p|Trimin1|151949 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YS16_9STRA	6.680e-76	100.00	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
A0A835ZPI2_9STRA	6.990e-61	80.73	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
A0A7S2G8M0_9STRA	3.510e-56	77.98	Hypothetical protein (Fragment) n=2 Tax=Dictyocha ...	[more]
A0A7S2ST59_9STRA	1.480e-55	77.06	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
F0Y4P7_AURAN	3.140e-54	72.48	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A7S3JRY5_9STRA	1.850e-52	71.56	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A3M6VGP6_9STRA	6.530e-52	73.39	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]
H3HDP9_PHYRM	8.320e-52	73.39	Uncharacterized protein n=6 Tax=Phytophthora TaxID...	[more]
A0A7S3ZTY8_9STRA	9.970e-52	71.56	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A484E484_BRELC	1.040e-51	72.48	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 1..56 e-value: 4.9E-13 score: 59.3 coord: 59..107 e-value: 3.0E-13 score: 60.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 55..105 score: 10.545467
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..54 score: 11.404785
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 4..54 e-value: 3.34072E-10 score: 49.4962
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 62..102 e-value: 4.88629E-9 score: 46.4146
None	No IPR available	GENE3D	1.10.10.60		coord: 61..109 e-value: 1.4E-18 score: 68.6
None	No IPR available	GENE3D	1.10.10.60		coord: 2..59 e-value: 6.7E-19 score: 69.6
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 5..69 e-value: 1.5E-16 score: 60.4
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 5..107
None	No IPR available	PANTHER	PTHR45614:SF5	TRANSCRIPTIONAL ACTIVATOR MYB	coord: 5..107
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..54 score: 18.195885
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 55..109 score: 24.685389
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_6	contig	Contig_6:700071..700920 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|151949	mRNA_2117	Tribonema minus UTEX_B_3156	mRNA	Contig_6 700071..700920 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|151949|gw1.6.297.1 ID=Trimin1|151949|gw1.6.297.1|Name=jgi.p|Trimin1|151949|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=109bp
ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRW
LNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNH
WYSTMRKNM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf