Trimin1|151688|gw1.3.426.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|151688
Unique NameTrimin1|151688|gw1.3.426.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length405
Homology
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BLAST of jgi.p|Trimin1|151688 vs. uniprot
Match: A0A835YXD7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.320e-5
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0 
Query:    1 LTELNLEECYGLVHLPHSIGDLMSLT 26
            LTELNLEECYGLVHLPHSIGDLMSLT
Sbjct:    1 LTELNLEECYGLVHLPHSIGDLMSLT 26
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|151688 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YXD7_9STRA2.320e-5100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 183..405
e-value: 9.7E-42
score: 144.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..182
e-value: 1.2E-38
score: 134.4
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 48..181
coord: 1..52
coord: 183..287
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 48..181
coord: 1..52
coord: 183..287
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 253..405
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 253..405
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..180
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 183..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:1067964..1072931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|151688mRNA_381Tribonema minus UTEX_B_3156 mRNAContig_3 1067964..1072931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|151688|gw1.3.426.1 ID=Trimin1|151688|gw1.3.426.1|Name=jgi.p|Trimin1|151688|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=405bp
LTELNLEECYGLVHLPHSIGDLMSLTRLHLQECSDLQYLPDSIGNLSSLA
ALTKLDVSNCSAVSCLPDTIGALQELTCLQVTLCDELEALPDTICRLSSL
TKLDVRDCEGLAALPNDIGSMQALTYLDLRMCSELMMLPDSIGELAALRA
LVLRGCTGLFCLPDALWQLIKLTSINAQGCQERLNLRDCHGLFHMPHSIG
DLASLTRLHLRECSGLQHLPDSIGNLSLLTELSLLLCEQISSLPDTIGNL
VSLEKFTLAFCPALTSLPRSIGSLAALTKLNLLCCGALDCLSDTIGELQA
LTCLDVFSCAGLVALPDTLGSLSVLTEIELSECTGLTALPISIGDLQVLT
HLDLSMCQALAALPDSIGNLQSLTRLNLQDCTRLPCLPDSLWQLKRLTSI
TAKGC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf