Trimin1|151359|gw1.129.89.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|151359
Unique Name	Trimin1\|151359\|gw1.129.89.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	110

Homology

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BLAST of jgi.p|Trimin1|151359 vs. uniprot
Match: A0A835ZH79_9STRA (PH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH79_9STRA)

HSP 1 Score: 231 bits (588), Expect = 6.150e-77
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query:    1 PIYLCGWLHKMKRTQRKFRSTWARRWFTVQDGCLLWYTSPNTVESSGSIRLHAIKSVSRFEAGCQGSFSFVVNSSDRNMLLRAETHADLSRWIRGITLQLDLLRGGTIQG 110
            PIYLCGWLHKMKRTQRKFRSTWARRWFTVQDGCLLWYTSPNTVESSGSIRLHAIKSVSRFEAGCQGSFSFVVNSSDRNMLLRAETHADLSRWIRGITLQLDLLRGGTIQG
Sbjct:    1 PIYLCGWLHKMKRTQRKFRSTWARRWFTVQDGCLLWYTSPNTVESSGSIRLHAIKSVSRFEAGCQGSFSFVVNSSDRNMLLRAETHADLSRWIRGITLQLDLLRGGTIQG 110

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BLAST of jgi.p|Trimin1|151359 vs. uniprot
Match: D7FUR5_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR5_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 8.710e-33
Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 0

Query:    1 PIYLCGWLHKMKRTQRKFRSTWARRWFTVQDGCLLWYTSPNTVESSGSIRLHAIKSVSRFEAGCQGSFSFVVNSSDRNMLLRAETHADLSRWIRGITLQLDLLRGGTIQG 110
            PI +CGWL KMKR  RKFRSTW RRWFTV+DG   WY + ++ ++ G + L  I+SV R+     GS++FVV+++DR MLLRA++  D SRWIRG+TLQ DL+ GGT QG
Sbjct:   31 PIIICGWLLKMKREHRKFRSTWNRRWFTVEDGAFNWYKTSSS-DACGRLSLLDIQSVRRYVGTEHGSYTFVVHATDREMLLRADSANDESRWIRGLTLQTDLVHGGTFQG 139

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BLAST of jgi.p|Trimin1|151359 vs. uniprot
Match: A0A7S2HE46_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE46_9STRA)

HSP 1 Score: 119 bits (297), Expect = 8.800e-31
Identity = 58/110 (52.73%), Postives = 70/110 (63.64%), Query Frame = 0

Query:    1 PIYLCGWLHKMKRTQRKFRSTWARRWFTVQDGCLLWYTSPNTVESSGSIRLHAIKSVSRFEAGCQGSFSFVVNSSDRNMLLRAETHADLSRWIRGITLQLDLLRGGTIQG 110
            PI + GWL K+KR QR F STW RRWFT+QDG L WY+   +   SGSI L     V  FE G QG FSF++ +SDRN+ LRAE+   L  W  G+ LQ+DL  GGT  G
Sbjct:    9 PIVMRGWLLKLKRNQRLFMSTWNRRWFTIQDGRLNWYSGKRSKNPSGSIDLEQFTDVEPFEIGGQGCFSFIIRTSDRNLFLRAESAQKLKYWKTGLQLQMDLFAGGTRLG 118

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|151359 vs. uniprot

BLAST of jgi.p|Trimin1|151359 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835ZH79_9STRA	6.150e-77	100.00	PH domain-containing protein (Fragment) n=1 Tax=Tr...	[more]
D7FUR5_ECTSI	8.710e-33	56.36	PH domain-containing protein n=1 Tax=Ectocarpus si...	[more]
A0A7S2HE46_9STRA	8.800e-31	52.73	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 2..103 e-value: 4.7E-16 score: 69.3
IPR001849	Pleckstrin homology domain	PFAM	PF00169	PH	coord: 3..97 e-value: 1.2E-13 score: 51.5
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 1..101 score: 12.0984
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 1..102 e-value: 6.2E-21 score: 76.3
IPR045188	PH domain containing protein Boi1/Boi2-like	PANTHER	PTHR22902	SESQUIPEDALIAN	coord: 5..96
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 2..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_129	contig	Contig_129:417839..418168 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|151359	mRNA_9895	Tribonema minus UTEX_B_3156	mRNA	Contig_129 417839..418168 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|151359|gw1.129.89.1 ID=Trimin1|151359|gw1.129.89.1|Name=jgi.p|Trimin1|151359|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=110bp
PIYLCGWLHKMKRTQRKFRSTWARRWFTVQDGCLLWYTSPNTVESSGSIR
LHAIKSVSRFEAGCQGSFSFVVNSSDRNMLLRAETHADLSRWIRGITLQL
DLLRGGTIQG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001849	PH_domain
IPR011993	PH-like_dom_sf
IPR045188	Boi1/Boi2-like