Trimin1|149944|gw1.264.14.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|149944
Unique NameTrimin1|149944|gw1.264.14.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length348
Homology
[Close]
BLAST of jgi.p|Trimin1|149944 vs. uniprot
Match: A0A835Z1D5_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1D5_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.410e-73
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 
Query:    1 AARAGRVDVLEWALRRGVPREPGPMSLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSARGGRPLALDTKLLCTAAEAGSVDMCEWLRARGVRITEDVCRSAALRGCIPVLQWVRDALRADCPWTTWTCEAAASGGHLEALQWLHGA 158
            AARAGRVDVLEWALRRGVPREPGPMSLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSARGGRPLALDTKLLCTAAEAGSVDMCEWLRARGVRITEDVCRSAALRGCIPVLQWVRDALRADCPWTTWTCEAAASGGHLEALQWLHGA
Sbjct:    1 AARAGRVDVLEWALRRGVPREPGPMSLAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSARGGRPLALDTKLLCTAAEAGSVDMCEWLRARGVRITEDVCRSAALRGCIPVLQWVRDALRADCPWTTWTCEAAASGGHLEALQWLHGA 158
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149944 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z1D5_9STRA1.410e-73100.00Ankyrin repeat-containing domain protein (Fragment... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..348
e-value: 2.8E-25
score: 90.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 24..326
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 221..262
e-value: 7.0E-5
score: 23.3
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 221..345
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 1..71
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 221..345
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_264contigContig_264:92757..102253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149944mRNA_18535Tribonema minus UTEX_B_3156 mRNAContig_264 92757..102253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|149944|gw1.264.14.1 ID=Trimin1|149944|gw1.264.14.1|Name=jgi.p|Trimin1|149944|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=348bp
AARAGRVDVLEWALRRGVPREPGPMSLAALGGHVPVLQWLQAHDFPWDPQ
AARSAVKGGSLAALAWLDSARGGRPLALDTKLLCTAAEAGSVDMCEWLRA
RGVRITEDVCRSAALRGCIPVLQWVRDALRADCPWTTWTCEAAASGGHLE
ALQWLHGAPWTTWTCEGVASGGHLEALQWLHGEGCPWDAWSPKAAAFLGH
LEVIKWLHSMGCPWDERTSYAAASEGHLDLLVWIHSHGCPWNSQAVKAAV
MEGHLDVLKYLHAQGAPWDPHACCIAAAEGHLEVLQWLHDIGCGWSAETS
MHAALRGHLYALQWLRHQGCPWDSSTASAAWEMGEWDCYYWAVEHGCP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt