Trimin1|149910|gw1.68.100.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|149910
Unique NameTrimin1|149910|gw1.68.100.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length53
Homology
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: A0A836C952_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C952_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.390e-31
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53
            EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR
Sbjct:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: A0A835YHT8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHT8_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.600e-24
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53
            E TGRWTK EHDLF+KAL +YG+EW+ +AAMVGTRTVVQTRTHAQKYFQKLQ+
Sbjct:   27 EQTGRWTKGEHDLFLKALGVYGKEWKRVAAMVGTRTVVQTRTHAQKYFQKLQK 79          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: A0A7S3LKU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKU2_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.340e-20
Identity = 38/51 (74.51%), Postives = 46/51 (90.20%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKL 51
            E+TGRWTKAEHD FVK L++YG+EW+ IAAM+ TRT+VQ RTHAQKYFQK+
Sbjct:   87 ENTGRWTKAEHDRFVKGLDVYGKEWKKIAAMIETRTIVQIRTHAQKYFQKI 137          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: A0A7S2L2R4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L2R4_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 6.680e-20
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53
            EHTGRWTK EHD F+ AL LYG+EW+ +AA V TRTVVQTRTHAQKYFQKLQR
Sbjct:  111 EHTGRWTKEEHDSFLTALQLYGKEWKKVAARVKTRTVVQTRTHAQKYFQKLQR 163          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: B7FXN5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXN5_PHATC)

HSP 1 Score: 88.6 bits (218), Expect = 3.170e-19
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53
            EHTGRWTKAEH+ F+ AL  YG+EW+ +AA V TRTVVQTRTHAQKYFQKLQ+
Sbjct:  109 EHTGRWTKAEHEAFLSALQTYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLQK 161          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: A0A7R9YEJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEJ1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.310e-19
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53
            EHTGRWT+ EH LF+ AL ++G+EW+ +AA VGTRTVVQTRTHAQKYFQKLQ+
Sbjct:  142 EHTGRWTREEHALFLNALRIHGKEWKKVAASVGTRTVVQTRTHAQKYFQKLQK 194          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: A0A6H5K5H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H7_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 5.920e-19
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKL 51
            E TGRWTKAEH+LF+KAL  YG+EW+ +A MV TRTVVQTRTHAQKYFQKL
Sbjct:  224 EQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKL 274          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: A0A7S4RBR2_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBR2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.090e-19
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53
            EHTGRWT+ EH+ F+ AL LYG+EW+ +AA V TRTVVQTRTHAQKYFQKLQ+
Sbjct:  204 EHTGRWTREEHEAFLSALQLYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLQK 256          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: A0A7S3Q3P5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3P5_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.100e-18
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKLQR 53
            EHTGRWT+ EHD F++AL  YG+EW+ +AA V TRTVVQTRTHAQKYFQKLQ+
Sbjct:   66 EHTGRWTREEHDAFLQALQQYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLQK 118          
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.510e-18
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQKL 51
            E TGRWTKAEH+LF++AL  YG+EW+ +A MV TRTVVQTRTHAQKYFQKL
Sbjct:  746 EQTGRWTKAEHELFLRALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKL 796          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149910 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C952_9STRA4.390e-31100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YHT8_9STRA1.600e-2481.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3LKU2_9STRA3.340e-2074.51Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A7S2L2R4_9STRA6.680e-2079.25Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
B7FXN5_PHATC3.170e-1975.47Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7R9YEJ1_9STRA4.310e-1973.58Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6H5K5H7_9PHAE5.920e-1978.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4RBR2_9STRA8.090e-1973.58Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A7S3Q3P5_9STRA1.100e-1873.58Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
D8LG60_ECTSI1.510e-1876.47Histone deactylase of possible bacterial origin wi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 2..50
e-value: 1.7E-11
score: 54.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..48
score: 7.143034
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 5..48
e-value: 4.4054E-9
score: 44.4886
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 5..50
e-value: 1.9E-13
score: 48.5
NoneNo IPR availableGENE3D1.10.10.60coord: 5..52
e-value: 7.4E-18
score: 66.4
NoneNo IPR availablePANTHERPTHR12802:SF20MYB-LIKE PROTEIN Gcoord: 5..51
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 5..51
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 3..47
e-value: 1.1E-13
score: 51.1
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..52
score: 18.633579
IPR017884SANT domainPROSITEPS51293SANTcoord: 1..37
score: 11.335203
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 3..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:672825..673646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149910mRNA_8541Tribonema minus UTEX_B_3156 mRNAContig_68 672825..673646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|149910|gw1.68.100.1 ID=Trimin1|149910|gw1.68.100.1|Name=jgi.p|Trimin1|149910|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=53bp
EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTRTVVQTRTHAQKYFQK
LQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR017884SANT_dom
IPR009057Homeobox-like_sf