Trimin1|149745|gw1.82.74.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|149745
Unique Name	Trimin1\|149745\|gw1.82.74.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	57

Homology

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: A0A835YJ23_9STRA (Ubiquitin-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ23_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.710e-32
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG
Sbjct:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: UPI00174DE9BE (polyubiquitin-like n=1 Tax=Myotis myotis TaxID=51298 RepID=UPI00174DE9BE)

HSP 1 Score: 60.5 bits (145), Expect = 5.000e-10
Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            SDT++ +K  I+    +P  Q  L+F GKQL  GC+LSDY I+ ES +H +LRLR G
Sbjct:   20 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGCILSDYNIQKESTLHLVLRLRGG 76

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: A0A369KJ43_HYPMA (Uncharacterized protein n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369KJ43_HYPMA)

HSP 1 Score: 60.8 bits (146), Expect = 2.160e-9
Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 0

Query:    2 DTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            DTV  +K  ++G   +P++Q  L+F GKQL  G LLSDY IKHES +H ILRL  G
Sbjct:  389 DTVYDIKAVVQGREGMPLEQQRLIFGGKQLEDGRLLSDYNIKHESTIHVILRLSGG 444

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: A0A8C9PIF7_SPEDA (Ubiquitin-like domain-containing protein n=1 Tax=Spermophilus dauricus TaxID=99837 RepID=A0A8C9PIF7_SPEDA)

HSP 1 Score: 56.6 bits (135), Expect = 4.170e-9
Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            SDT++ +K  I+     P  Q  L+F GKQL  GC+LSDY I+ ES  H +L LR G
Sbjct:   33 SDTIENMKAKIQDKKVFPPDQQRLIFAGKQLEDGCILSDYNIRKESAQHLVLHLRGG 89

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: T1NJN3_TRIUA (Ubiquitin-like domain-containing protein n=1 Tax=Triticum urartu TaxID=4572 RepID=T1NJN3_TRIUA)

HSP 1 Score: 55.8 bits (133), Expect = 4.730e-9
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            SDT+D +K  I+    +P  Q  L+F GKQL  G +L+DY I+ ES +H +LRLR G
Sbjct:   10 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRMLTDYNIQKESTLHLVLRLRGG 66

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: A0A507DEE6_9FUNG (Ubiquitin-like domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DEE6_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 7.770e-9
Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            SDTV+ LK+ +EG   +P  +L L+  GKQL  G +LSDY I+ ES VH   RLR G
Sbjct:   45 SDTVEALKQRLEGREGIPSHELRLIHSGKQLEDGHILSDYAIERESTVHLSSRLRGG 101

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: A0A8H5G3U0_9AGAR (Uncharacterized protein n=1 Tax=Tetrapyrgos nigripes TaxID=182062 RepID=A0A8H5G3U0_9AGAR)

HSP 1 Score: 58.5 bits (140), Expect = 1.420e-8
Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            S TVD L+E +   T +P  +  LL+ GKQL  G LLSDYGI  ES +H +LRLR G
Sbjct:  223 SGTVDQLQEQVYQKTLIPASEQRLLYAGKQLEPGRLLSDYGILKESTLHLVLRLRGG 279

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: A0A6A4SGQ4_SCOMX (Uncharacterized protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4SGQ4_SCOMX)

HSP 1 Score: 56.2 bits (134), Expect = 2.170e-8
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            SDT++ +K  I+     P  Q  L+F GKQL  G +LSDY I+ ESV+H +LRLR G
Sbjct:   96 SDTIENVKAKIQDKETTPPHQQRLIFAGKQLKDGRILSDYNIQKESVLHLVLRLRGG 152

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: A0A5A7PU00_STRAF (Ubiquitin family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PU00_STRAF)

HSP 1 Score: 54.7 bits (130), Expect = 3.350e-8
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            SD +D +K  I+    +P  Q  L+F GKQL  G +LSDY I+ ES +H +LRLR G
Sbjct:   20 SDPIDNVKAKIQDKEGIPSDQQRLIFAGKQLEDGRILSDYNIQKESTLHLVLRLRGG 76

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BLAST of jgi.p|Trimin1|149745 vs. uniprot
Match: A0A4Y7TAI2_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TAI2_9AGAR)

HSP 1 Score: 57.4 bits (137), Expect = 3.560e-8
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 0

Query:    1 SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHFILRLRAG 57
            SDT+D  K  I+    +P  Q  L+F GKQL  G LLSDYG+++E V++ ++RLR G
Sbjct:   97 SDTIDNFKAKIQDREGIPADQQRLIFAGKQLEDGRLLSDYGLRNEDVLYLVIRLRGG 153

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|149745 vs. uniprot

BLAST of jgi.p|Trimin1|149745 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YJ23_9STRA	1.710e-32	100.00	Ubiquitin-like domain-containing protein (Fragment...	[more]
UPI00174DE9BE	5.000e-10	49.12	polyubiquitin-like n=1 Tax=Myotis myotis TaxID=512...	[more]
A0A369KJ43_HYPMA	2.160e-9	53.57	Uncharacterized protein n=1 Tax=Hypsizygus marmore...	[more]
A0A8C9PIF7_SPEDA	4.170e-9	47.37	Ubiquitin-like domain-containing protein n=1 Tax=S...	[more]
T1NJN3_TRIUA	4.730e-9	47.37	Ubiquitin-like domain-containing protein n=1 Tax=T...	[more]
A0A507DEE6_9FUNG	7.770e-9	50.88	Ubiquitin-like domain-containing protein n=1 Tax=S...	[more]
A0A8H5G3U0_9AGAR	1.420e-8	52.63	Uncharacterized protein n=1 Tax=Tetrapyrgos nigrip...	[more]
A0A6A4SGQ4_SCOMX	2.170e-8	49.12	Uncharacterized protein n=1 Tax=Scophthalmus maxim...	[more]
A0A5A7PU00_STRAF	3.350e-8	47.37	Ubiquitin family protein n=1 Tax=Striga asiatica T...	[more]
A0A4Y7TAI2_9AGAR	3.560e-8	47.37	Ubiquitin-like domain-containing protein n=1 Tax=C...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 34..55 score: 54.19 coord: 13..33 score: 36.92
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 1..55 e-value: 2.2E-12 score: 46.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..57 score: 15.187551
None	No IPR available	GENE3D	3.10.20.90		coord: 1..57 e-value: 2.7E-16 score: 61.1
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..57

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_82	contig	Contig_82:624464..624634 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|149745	mRNA_11005	Tribonema minus UTEX_B_3156	mRNA	Contig_82 624464..624634 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|149745|gw1.82.74.1 ID=Trimin1|149745|gw1.82.74.1|Name=jgi.p|Trimin1|149745|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=57bp
SDTVDFLKEAIEGVTRLPVKQLSLLFEGKQLAMGCLLSDYGIKHESVVHF
ILRLRAG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019956	Ubiquitin_dom
IPR000626	Ubiquitin-like_dom
IPR029071	Ubiquitin-like_domsf