Trimin1|147988|gw1.19.143.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|147988
Unique Name	Trimin1\|147988\|gw1.19.143.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	353

Homology

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BLAST of jgi.p|Trimin1|147988 vs. uniprot
Match: A0A835Z3C8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C8_9STRA)

HSP 1 Score: 677 bits (1746), Expect = 2.040e-245
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0

Query:    1 EFGAQDFLEPGRQFVLEGDLIKITRGGRKEHKFVLFNDKLVYGEEKGLLMRRTGMFANVVSGNTKRQYRKAYDFPLSRGLYVVNDVGGAYASARSGXXXXXAAEGVLGDTGFMFITPDKSFVVHAASPAEKDAWVQALRRVMADLTAKGDSRALKVDMDLSDKVKPAKSGKSISCDIFVWVIRDGKTMRQGFSLPPSALSAPFGVLSYSELVQRGAQVDPSPTRAGLPDDDLGFGLEWDAPPALQLEVLPDPFDDDYDDPLGGSRLQVEVSLQPGDRLGLRLRDIQGGGVLVMGFITRGCAAQVAGVCQGDRVTHIDGTGPLLSAAEAXXXXXXXLDRCGGGGVLKLTLRRGF 353
            EFGAQDFLEPGRQFVLEGDLIKITRGGRKEHKFVLFNDKLVYGEEKGLLMRRTGMFANVVSGNTKRQYRKAYDFPLSRGLYVVNDVGGAYASARSGXXXXXAAEGVLGDTGFMFITPDKSFVVHAASPAEKDAWVQALRRVMADLTAKGDSRALKVDMDLSDKVKPAKSGKSISCDIFVWVIRDGKTMRQGFSLPPSALSAPFGVLSYSELVQRGAQVDPSPTRAGLPDDDLGFGLEWDAPPALQLEVLPDPFDDDYDDPLGGSRLQVEVSLQPGDRLGLRLRDIQGGGVLVMGFITRGCAAQVAGVCQGDRVTHIDGTGPLLSAAEAXXXXXXXLDRCGGGGVLKLTLRRGF
Sbjct:    1 EFGAQDFLEPGRQFVLEGDLIKITRGGRKEHKFVLFNDKLVYGEEKGLLMRRTGMFANVVSGNTKRQYRKAYDFPLSRGLYVVNDVGGAYASARSGXXXXXAAEGVLGDTGFMFITPDKSFVVHAASPAEKDAWVQALRRVMADLTAKGDSRALKVDMDLSDKVKPAKSGKSISCDIFVWVIRDGKTMRQGFSLPPSALSAPFGVLSYSELVQRGAQVDPSPTRAGLPDDDLGFGLEWDAPPALQLEVLPDPFDDDYDDPLGGSRLQVEVSLQPGDRLGLRLRDIQGGGVLVMGFITRGCAAQVAGVCQGDRVTHIDGTGPLLSAAEAXXXXXXXLDRCGGGGVLKLTLRRGF 353

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BLAST of jgi.p|Trimin1|147988 vs. uniprot
Match: A0A1E1XGQ0_9ACAR (Putative rho/rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XGQ0_9ACAR)

HSP 1 Score: 55.8 bits (133), Expect = 9.020e-5
Identity = 41/139 (29.50%), Postives = 64/139 (46.04%), Query Frame = 0

Query:    6 DFLEPGRQFVLEGDLIKITRGGRKEHKFVLFNDKLVYGEEKGLLMRRTGMFANVVSGNTKRQYRKAYDFPLSRGLYVVNDVGGAYASARSGXXXXXAAEGVLGDTGFMFITPDKSFVVHAASPAEKDAWVQALRRVMAD 144
            + L+PGR F+ EG+L+K++R   +   FVLF+D L+Y     LL    G             YR  Y+ PLS G+ V+      Y +                   F   T  +SF++ A+SP E++ W+ AL + + D
Sbjct: 1343 EVLKPGRTFLKEGELMKVSRKEMQPRYFVLFSDSLLY-----LLPTPQGF------------YRVNYELPLS-GMKVMVPPQQDYQNE------------------FSVYTMKRSFILSASSPEEREEWISALTKAIED 1445

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|147988 vs. uniprot

BLAST of jgi.p|Trimin1|147988 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z3C8_9STRA	2.040e-245	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A1E1XGQ0_9ACAR	9.020e-5	29.50	Putative rho/rac guanine nucleotide exchange facto...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001478	PDZ domain	SMART	SM00228	pdz_new	coord: 276..353 e-value: 4.4E-4 score: 29.6
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 267..351 score: 9.2298
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 14..145 e-value: 2.3E-8 score: 43.8
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 13..143 score: 11.145
IPR036034	PDZ superfamily	GENE3D	2.30.42.10		coord: 284..353 e-value: 4.0E-5 score: 25.5
IPR036034	PDZ superfamily	SUPERFAMILY	50156	PDZ domain-like	coord: 247..352
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 2..169 e-value: 9.0E-19 score: 69.7
None	No IPR available	CDD	cd00136	PDZ	coord: 278..319 e-value: 1.54066E-5 score: 40.3665
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 2..145

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_19	contig	Contig_19:96491..101227 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|147988	mRNA_5460	Tribonema minus UTEX_B_3156	mRNA	Contig_19 96491..101227 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|147988|gw1.19.143.1 ID=Trimin1|147988|gw1.19.143.1|Name=jgi.p|Trimin1|147988|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=353bp
EFGAQDFLEPGRQFVLEGDLIKITRGGRKEHKFVLFNDKLVYGEEKGLLM
RRTGMFANVVSGNTKRQYRKAYDFPLSRGLYVVNDVGGAYASARSGGGGG
GAAEGVLGDTGFMFITPDKSFVVHAASPAEKDAWVQALRRVMADLTAKGD
SRALKVDMDLSDKVKPAKSGKSISCDIFVWVIRDGKTMRQGFSLPPSALS
APFGVLSYSELVQRGAQVDPSPTRAGLPDDDLGFGLEWDAPPALQLEVLP
DPFDDDYDDPLGGSRLQVEVSLQPGDRLGLRLRDIQGGGVLVMGFITRGC
AAQVAGVCQGDRVTHIDGTGPLLSAAEAAAAAAAALDRCGGGGVLKLTLR
RGF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001478	PDZ
IPR001849	PH_domain
IPR036034	PDZ_sf
IPR011993	PH-like_dom_sf