Trimin1|147878|gw1.14.181.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|147878
Unique NameTrimin1|147878|gw1.14.181.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length132
Homology
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A836CLG1_9STRA (Complex1_LYR_dom domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG1_9STRA)

HSP 1 Score: 261 bits (666), Expect = 3.980e-88
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query:    1 VIRIYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARNQEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLGEHGF 132
            VIRIYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARNQEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLGEHGF
Sbjct:    1 VIRIYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARNQEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLGEHGF 132          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A7S2S2D5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2D5_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.230e-26
Identity = 59/131 (45.04%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    1 VIRIYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARNQEG--AVKVVYQDGKLVEHVQT-DRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLG 128
            V+ +YR LL  ++ +    +R +A   VR+ F+ H  E+ +E++ QLL QA+SRLS+LK+VTPR+     G  +   VYQ+GK ++      + RA  SNWTGSNMDPDSV++H+H L+RAGF+D+ H  G
Sbjct:    9 VLPLYRQLLFLSQHISDVKKRPEAVALVRDAFREHRLETDEERIQQLLAQAESRLSFLKMVTPREYHRLGGQQSTYYVYQNGKRLDDGSARTQDRARHSNWTGSNMDPDSVAKHQHLLNRAGFQDNSHAKG 139          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A7S3HMX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMX3_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 7.970e-23
Identity = 55/127 (43.31%), Postives = 77/127 (60.63%), Query Frame = 0
Query:    4 IYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARN--QEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLG 128
            +YR++L+ AR LP  A+R D  +Q+R+GF+A         +  +L +A S L YLKIVTPR  +   Q G  K V+ D  +       +   P+SNWTGSNMDPDSV+RH  +L RAGFK++  + G
Sbjct:   15 LYRNMLRYARSLPA-AKRNDGIEQIRKGFRAGKETDDPALIKAMLEKANSTLGYLKIVTPRSPKQHVQTGKTKTVFGDDSM-------KLSRPVSNWTGSNMDPDSVARHERSLKRAGFKNNADMKG 133          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A2R5GRX5_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRX5_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.880e-21
Identity = 54/117 (46.15%), Postives = 79/117 (67.52%), Query Frame = 0
Query:    4 IYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARNQEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGF 120
            +Y+ LL++ARRLP+ A+RA A Q+VR+ FKAH  E S EK+ +LLN AQS+L YLKIVTPR +R+  G  ++V +DGK VE       RAP      +++D D++++H + + R  F
Sbjct:   16 LYKQLLQTARRLPE-AQRAAAAQEVRDKFKAHAAEGSPEKVQELLNLAQSKLGYLKIVTPRTSRDATGKARLVLRDGKWVEGSARLMDRAPHDK---TSVDADALAKHNYLMERQHF 128          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A6U5IKK5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5IKK5_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.150e-20
Identity = 49/127 (38.58%), Postives = 80/127 (62.99%), Query Frame = 0
Query:    5 YRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARN---QEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLG 128
            +R + +  RRLP P +RADA + +R G++ H+  +  E+ + LL +A+ +++YL+++TP+D      Q+G+V+ VY   +  E       RAP+SNW GSN+DP+SV RH   L R G++D+ H  G
Sbjct:   25 FRSIHRLIRRLPSPKDRADALRDLRAGYRTHLDVAPAERDSLLL-EAEKKMAYLRMITPKDRTRDGPQQGSVRYVY--AREGEGGNGTVRRAPVSNWHGSNLDPESVKRHHQLLRRGGWRDNAHAKG 148          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A448YU73_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU73_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.940e-13
Identity = 48/141 (34.04%), Postives = 77/141 (54.61%), Query Frame = 0
Query:    5 YRHLLKSARRLPKPAERA-----DAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDA-----RNQEGAVKV---VYQDGKLVEHVQTDRPRAP----ISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLG 128
            YR LL+   RLP+ +  A     ++ + +R  F+  +  +  E +   L +A+S+ S+LK+VTPR+      R +EGA      VY++G+ +E     R R      +SNW G N+DPDSV +H + L R GF+++ H  G
Sbjct:   13 YRSLLRLVHRLPEASSPASLSPEESLRSLRSAFRTPL--APGESVGDRLEEAESKRSFLKMVTPRERPSSSRRTEEGASPSRVWVYRNGERLERDGASRVRDKNGRVVSNWDGKNLDPDSVKQHNYQLKRMGFRNNAHAKG 151          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A7S2HLR1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLR1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 8.970e-13
Identity = 51/140 (36.43%), Postives = 77/140 (55.00%), Query Frame = 0
Query:    1 VIRIYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRD-----ARNQEGAVKVVY-------QDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLG 128
            V+  YR L K  RRLP P ++  + QQ+R+ +KA+      + +  LL +A  +++YL+I+TP+D     +++Q    + VY       QDG      Q  +     SNW+G NMDP SV RH+  LSRAGF ++ H  G
Sbjct:   13 VLSTYRTLHKLIRRLPTP-QQPSSLQQLRQTYKANATVPPSQ-IQPLLEEAGKKIAYLRIITPKDKWRGDSKSQSAETRWVYNGKGEKIQDGVGTPSHQKGKVH---SNWSGGNMDPCSVKRHKQQLSRAGFVNNLHAKG 147          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A2D4BZA9_PYTIN (Complex1_LYR_dom domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZA9_PYTIN)

HSP 1 Score: 66.2 bits (160), Expect = 2.970e-11
Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 0
Query:    4 IYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARNQEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHG 124
            IY+ LL+ A+ +P  A+R    QQ+R  F++H+  S  ++++ LL +AQS++ +LKIVTPR AR+  G   +VY  G   E V  D      + +  ++ +  ++ RH   L R  F D G
Sbjct:   14 IYKKLLRLAKSIPDVAKRESTVQQIRSEFRSHLDSSDPKEISALLQRAQSKIGFLKIVTPR-ARSDSGRTNIVYMKG---ERVDGDSVSEEGARYKTADFE-SNLRRHNQLLRRQHFLDRG 129          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A3R7JVW5_9STRA (Complex1_LYR_dom domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JVW5_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.570e-9
Identity = 39/120 (32.50%), Postives = 67/120 (55.83%), Query Frame = 0
Query:    4 IYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRD-ARNQEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKD 122
            +Y+ LL+ A+ LP+P +R  +  Q+R  F+ H   S  +++++LL  AQS LSYLKIVTPRD   +  G  + +Y++G+ V   + +      + +   +M+   + RH   + R  F D
Sbjct:   11 LYKKLLRMAQALPEP-KRHQSLSQIRREFRNHGDLSDPKEVSKLLQLAQSSLSYLKIVTPRDETESNSGVQRYIYRNGQRVNAAELEEKGEENARYKTQDMEA-GLKRHHQLMRRQHFMD 128          
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Match: A0A484E4S1_BRELC (Complex1_LYR_dom domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4S1_BRELC)

HSP 1 Score: 60.8 bits (146), Expect = 4.770e-9
Identity = 39/119 (32.77%), Postives = 65/119 (54.62%), Query Frame = 0
Query:    4 IYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTPRDARNQEGAVKVVYQDGKLVEHVQTDRPRAPISNWTGSNMDPDSVSRHRHTLSRAGFKD 122
            +Y+ LL+ A+ LP P +R  +  Q+R  F+ H +  +  K+++L+ +AQS LSYLKI+TPR   +  G  + VY++GK V   + +      + W   ++    + RH   L R  F D
Sbjct:   28 LYKKLLRMAQNLPAP-KRQSSIDQIRREFRCHEN-LTDSKVSELIERAQSSLSYLKIITPR-TESHTGIQRFVYRNGKRVSATEFEAKEGEPARWKTQDIKA-GLKRHHQLLRRQHFMD 142          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|147878 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A836CLG1_9STRA3.980e-88100.00Complex1_LYR_dom domain-containing protein (Fragme... [more]
A0A7S2S2D5_9STRA2.230e-2645.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3HMX3_9STRA7.970e-2343.31Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A2R5GRX5_9STRA4.880e-2146.15Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A6U5IKK5_9STRA2.150e-2038.58Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448YU73_9STRA4.940e-1334.04Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2HLR1_9STRA8.970e-1336.43Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A2D4BZA9_PYTIN2.970e-1134.71Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A3R7JVW5_9STRA2.570e-932.50Complex1_LYR_dom domain-containing protein n=3 Tax... [more]
A0A484E4S1_BRELC4.770e-932.77Complex1_LYR_dom domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 1..55
e-value: 2.7E-11
score: 43.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:480953..482650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|147878mRNA_3168Tribonema minus UTEX_B_3156 mRNAContig_14 480953..482650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|147878|gw1.14.181.1 ID=Trimin1|147878|gw1.14.181.1|Name=jgi.p|Trimin1|147878|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=132bp
VIRIYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQ
AQSRLSYLKIVTPRDARNQEGAVKVVYQDGKLVEHVQTDRPRAPISNWTG
SNMDPDSVSRHRHTLSRAGFKDHGHVLGEHGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom