Trimin1|147297|gw1.7.226.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|147297
Unique NameTrimin1|147297|gw1.7.226.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length66
Homology
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A835YZZ2_9STRA (U-box domain-containing protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZZ2_9STRA)

HSP 1 Score: 129 bits (324), Expect = 5.020e-38
Identity = 60/66 (90.91%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAIATAVHYHR 66
            PAHF CP+ LDWLVNPVITPSG TYSQAELELWVRENGTDP+ARS LAMSEVIPNLAIATAVHYHR
Sbjct:    1 PAHFLCPIFLDWLVNPVITPSGTTYSQAELELWVRENGTDPIARSRLAMSEVIPNLAIATAVHYHR 66          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A836CKT5_9STRA (U-box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKT5_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.610e-35
Identity = 56/66 (84.85%), Postives = 59/66 (89.39%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAIATAVHYHR 66
            PAHF CP  LDWLVNP ITPSGITYS+ ELELWVRENGTDP+ARS L +SEVIPNLAIATAVHYHR
Sbjct:    1 PAHFLCPTFLDWLVNPAITPSGITYSRGELELWVRENGTDPIARSRLGLSEVIPNLAIATAVHYHR 66          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A836C868_9STRA (U-box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C868_9STRA)

HSP 1 Score: 117 bits (292), Expect = 9.030e-33
Identity = 53/66 (80.30%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAIATAVHYHR 66
            PAHF CP++LDWLVNPV TPSGIT  + ELELWV ENGTDP+ARS LA SEVIPNLA+ATAVHYHR
Sbjct:   21 PAHFLCPISLDWLVNPVTTPSGITSPRGELELWVSENGTDPIARSRLATSEVIPNLAVATAVHYHR 86          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A835YWC4_9STRA (U-box domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWC4_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.480e-30
Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAI--ATAVH 63
            PAH  CP++LDWLVNPVITPSGITYS+ EL+LWVRENGTDPVARS LAMSEVI NLAI  ATAVH
Sbjct:    1 PAHLLCPISLDWLVNPVITPSGITYSREELDLWVRENGTDPVARSRLAMSEVISNLAIMFATAVH 65          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A835Z5B2_9STRA (U-box domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.600e-29
Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAIATAV 62
            PAHF  P++L WLVNPV+TPSGITYS+ ELELWVRENGTDP+AR  LAMSEV PNLAIATAV
Sbjct:    1 PAHFLRPISLAWLVNPVVTPSGITYSREELELWVRENGTDPIARGRLAMSEVFPNLAIATAV 62          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A836CBI8_9STRA (U-box domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI8_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.870e-28
Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAI 58
            PAHF CP++LDW VNPV+TPSGITYS+ ELELWV ENGTDP+ARS L +SEV+PN+AI
Sbjct:    1 PAHFVCPISLDWHVNPVVTPSGITYSRGELELWVSENGTDPIARSRLTLSEVVPNIAI 58          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A835Z2F1_9STRA (U-box domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2F1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.720e-24
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHL 47
            PAHF CP++LDWLVNPVITPSGITYS+AELELWVRENGTDP+ARS L
Sbjct:    1 PAHFLCPISLDWLVNPVITPSGITYSRAELELWVRENGTDPIARSCL 47          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A2N1MYB8_9GLOM (RING-type E3 ubiquitin transferase n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N1MYB8_9GLOM)

HSP 1 Score: 65.9 bits (159), Expect = 8.440e-12
Identity = 25/66 (37.88%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAIATAVHYHR 66
            P+ + CP++L+W+ +PV+TPSG++Y +A LE W+R +  DP+ R  L + +V  N  +  A+ ++R
Sbjct:   95 PSQYMCPISLNWMEDPVVTPSGVSYDRALLEEWLRNDPHDPLTREVLTIDQVYANRNLKDAIEHYR 160          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A7S4FZ85_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FZ85_9EUGL)

HSP 1 Score: 65.5 bits (158), Expect = 3.040e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAIATAVHYHR 66
            PAH  CP+ L  + +PVITPSG TY +  +E W+  +GTDP  R  L   ++IPN  +   V  H+
Sbjct:  163 PAHLLCPITLQVMTDPVITPSGETYERQAIEQWLETHGTDPQTRRPLTKEQLIPNRRLKETVEVHK 228          
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Match: A0A7S3J6A7_9SPIT (Hypothetical protein n=2 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3J6A7_9SPIT)

HSP 1 Score: 62.0 bits (149), Expect = 7.970e-11
Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    4 FQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMSEVIPNLAIATAVH 63
            + CP+  D +V+PVITPSG+TY +  +E  ++ N  DPV++  L ++++ PNLAI   +H
Sbjct:   43 YTCPIKYDKIVDPVITPSGVTYERVMIERSIKVNRVDPVSKDRLTIAKIKPNLAIKCLIH 102          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|147297 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZZ2_9STRA5.020e-3890.91U-box domain-containing protein (Fragment) n=2 Tax... [more]
A0A836CKT5_9STRA2.610e-3584.85U-box domain-containing protein n=1 Tax=Tribonema ... [more]
A0A836C868_9STRA9.030e-3380.30U-box domain-containing protein n=1 Tax=Tribonema ... [more]
A0A835YWC4_9STRA1.480e-3083.08U-box domain-containing protein (Fragment) n=1 Tax... [more]
A0A835Z5B2_9STRA1.600e-2980.65U-box domain-containing protein (Fragment) n=1 Tax... [more]
A0A836CBI8_9STRA6.870e-2875.86U-box domain-containing protein (Fragment) n=1 Tax... [more]
A0A835Z2F1_9STRA6.720e-2487.23U-box domain-containing protein (Fragment) n=1 Tax... [more]
A0A2N1MYB8_9GLOM8.440e-1237.88RING-type E3 ubiquitin transferase n=2 Tax=Rhizoph... [more]
A0A7S4FZ85_9EUGL3.040e-1142.42Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3J6A7_9SPIT7.970e-1141.67Hypothetical protein n=2 Tax=Euplotes harpa TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U-box domainSMARTSM00504Ubox_2coord: 3..61
e-value: 6.8E-5
score: 32.3
IPR003613U-box domainPFAMPF04564U-boxcoord: 1..62
e-value: 1.1E-13
score: 51.1
IPR003613U-box domainPROSITEPS51698U_BOXcoord: 1..66
score: 10.952742
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..66
e-value: 5.1E-15
score: 57.2
IPR045200E3 ubiquitin-protein ligase CHIP/LubXPANTHERPTHR46803E3 UBIQUITIN-PROTEIN LIGASE CHIPcoord: 1..63
NoneNo IPR availablePANTHERPTHR46803:SF2E3 UBIQUITIN-PROTEIN LIGASE CHIPcoord: 1..63
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:1900867..1901064 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|147297mRNA_2692Tribonema minus UTEX_B_3156 mRNAContig_7 1900867..1901064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|147297|gw1.7.226.1 ID=Trimin1|147297|gw1.7.226.1|Name=jgi.p|Trimin1|147297|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=66bp
PAHFQCPVALDWLVNPVITPSGITYSQAELELWVRENGTDPVARSHLAMS
EVIPNLAIATAVHYHR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD
IPR045200CHIP/LubX