Trimin1|147039|gw1.197.29.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|147039
Unique Name	Trimin1\|147039\|gw1.197.29.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	98

Homology

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: A0A836CHW8_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHW8_9STRA)

HSP 1 Score: 209 bits (533), Expect = 6.270e-69
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP
Sbjct:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: A0A835Z2I1_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 4.430e-42
Identity = 67/98 (68.37%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            WTAEEDERLR  V   GE  WK IAA+VG+R+HVQCLQRWKKVLRPGL+KG WT AED  LAR V A    NW  V   L GRTS+QCRERW+HHL+P
Sbjct:    2 WTAEEDERLRKAVQRHGEWHWKLIAADVGSRDHVQCLQRWKKVLRPGLRKGEWTAAEDARLARTVAACTPLNWSAVCKSLTGRTSRQCRERWKHHLDP 99

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: A0A835Z3R6_9STRA (Homeodomain-like protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3R6_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.050e-40
Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            W  +EDERL   V   G ++WKRIAA+VGTRNHVQCLQRWKKVLRP LKKG+WT  ED LL   V++G  KNWG VA  L  RT +QC+ RWQHHL+P
Sbjct:   12 WAPDEDERLNAAVQAHGATKWKRIAAQVGTRNHVQCLQRWKKVLRPDLKKGDWTPEEDALLTDTVQSGTCKNWGKVALHLPNRTYRQCQLRWQHHLDP 109

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.890e-40
Identity = 69/98 (70.41%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            WT  EDE LRH V   GES WK IA EVGTRNHVQCLQRWKKVL+PGL KG W+  ED  L  LV  G FKNWG +AAQ+ GRTSKQCRERW HHL+P
Sbjct:   30 WTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKG-FKNWGQLAAQMPGRTSKQCRERWSHHLDP 126

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: A0A662WMC1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMC1_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.530e-36
Identity = 64/98 (65.31%), Postives = 71/98 (72.45%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            WTA EDE LR  V    E  WK IAA V  RNH QCLQRW KVL PGL KG+W+  EDELL RLV A + KNWG VAA++ GRTSKQCRERW +HL+P
Sbjct:    8 WTAAEDEALRSAVESHREKNWKAIAAHVAGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLRRLV-AADQKNWGDVAAKIPGRTSKQCRERWHNHLDP 104

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 129 bits (325), Expect = 2.660e-36
Identity = 62/98 (63.27%), Postives = 69/98 (70.41%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            WT EEDE+LR  V   GE  WK IA EV  RNH QCLQRW KVL PGL KG+W   ED+LL  LV  G  KNWG VA ++ GRTSKQCRERW +HL+P
Sbjct:   12 WTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGR-KNWGQVATRIPGRTSKQCRERWYNHLDP 108

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 129 bits (325), Expect = 2.000e-35
Identity = 61/98 (62.24%), Postives = 69/98 (70.41%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            WT EED++LR  V   GE  WK IA EV  RNH QCLQRW KVL PGL KG+W   ED+LL  LV  G  KNWG VA ++ GRTSKQCRERW +HL+P
Sbjct:   85 WTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGR-KNWGQVATRIPGRTSKQCRERWYNHLDP 181

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: A0A2D4BRV7_PYTIN (Myblike DNAbinding protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRV7_PYTIN)

HSP 1 Score: 134 bits (336), Expect = 2.360e-35
Identity = 64/98 (65.31%), Postives = 72/98 (73.47%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            WT EED+ LR  V    E  WK IAA+V  RNH QCLQRW KVL PGL KG+W+  EDELL RLV  GN KNWG VAA++ GRTSKQCRERW +HL+P
Sbjct:  225 WTKEEDDALRQAVENHKEKNWKAIAAQVPGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLKRLVAGGN-KNWGEVAAKIPGRTSKQCRERWHNHLDP 321

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 2.540e-35
Identity = 64/98 (65.31%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            W+ EEDERLR  V     + WK IAAEV TRNHVQCLQRWKKVL PGL KG WT  ED+LL  +V  G+ KNWG ++A++ GRTSKQCRERW HHL+P
Sbjct:   71 WSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGH-KNWGSLSARVPGRTSKQCRERWCHHLDP 167

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BLAST of jgi.p|Trimin1|147039 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA)

HSP 1 Score: 129 bits (323), Expect = 5.140e-35
Identity = 62/98 (63.27%), Postives = 68/98 (69.39%), Query Frame = 0

Query:    1 WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKKGNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP 98
            WT  EDE+LR  V   GE  WK IA EV  RNH QCLQRW KVL PGL KG+W   EDELL  LV  G  KNWG VA ++ GRTSKQCRERW +HL+P
Sbjct:  102 WTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGR-KNWGQVATRIPGRTSKQCRERWYNHLDP 198

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|147039 vs. uniprot

BLAST of jgi.p|Trimin1|147039 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CHW8_9STRA	6.270e-69	100.00	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
A0A835Z2I1_9STRA	4.430e-42	68.37	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
A0A835Z3R6_9STRA	2.050e-40	64.29	Homeodomain-like protein (Fragment) n=2 Tax=Tribon...	[more]
A0A7S2UU49_9STRA	2.890e-40	70.41	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A662WMC1_9STRA	2.530e-36	65.31	Uncharacterized protein (Fragment) n=1 Tax=Nothoph...	[more]
H3G911_PHYRM	2.660e-36	63.27	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
D0NJN5_PHYIT	2.000e-35	62.24	Myb-like DNA-binding protein, putative n=2 Tax=Phy...	[more]
A0A2D4BRV7_PYTIN	2.360e-35	65.31	Myblike DNAbinding protein putative n=1 Tax=Pythiu...	[more]
A0A6H5K458_9PHAE	2.540e-35	65.31	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A3M6VKU0_9STRA	5.140e-35	63.27	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 1..46 e-value: 1.7E-7 score: 40.9 coord: 49..98 e-value: 6.8E-13 score: 58.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..44 score: 10.22032
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 45..96 score: 11.76477
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 1..44 e-value: 1.1932E-9 score: 47.5702
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 52..96 e-value: 7.98303E-10 score: 47.9554
None	No IPR available	GENE3D	1.10.10.60		coord: 1..48 e-value: 3.3E-17 score: 64.2
None	No IPR available	GENE3D	1.10.10.60		coord: 49..98 e-value: 1.0E-18 score: 69.1
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 1..61 e-value: 2.2E-15 score: 56.6
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..61
None	No IPR available	PANTHER	PTHR45614:SF152	SUBFAMILY NOT NAMED	coord: 1..61
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 50..98
None	No IPR available	PANTHER	PTHR45614:SF152	SUBFAMILY NOT NAMED	coord: 50..98
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..48 score: 25.36738
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 49..98 score: 19.211174
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 24..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_197	contig	Contig_197:84303..85798 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|147039	mRNA_16428	Tribonema minus UTEX_B_3156	mRNA	Contig_197 84303..85798 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|147039|gw1.197.29.1 ID=Trimin1|147039|gw1.197.29.1|Name=jgi.p|Trimin1|147039|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=98bp
WTAEEDERLRHVVALRGESQWKRIAAEVGTRNHVQCLQRWKKVLRPGLKK
GNWTDAEDELLARLVEAGNFKNWGVVAAQLAGRTSKQCRERWQHHLNP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf