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Homology
BLAST of jgi.p|Trimin1|146878 vs. uniprot
Match: A0A835YY16_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY16_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.030e-13 Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0
Query: 1 GTTALMLAAINGHVDCVNALRQHDTAVLLHARDSNGGI 38
GTTALMLAAINGHVDCVNALRQHDTAVLLHARDSNGGI
Sbjct: 1 GTTALMLAAINGHVDCVNALRQHDTAVLLHARDSNGGI 38
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 35..64
e-value: 0.12
score: 21.5
coord: 1..29
e-value: 32.0
score: 13.4
coord: 140..171
e-value: 0.24
score: 20.4
coord: 280..309
e-value: 0.37
score: 19.8
coord: 105..136
e-value: 0.0031
score: 26.7
coord: 175..204
e-value: 11.0
score: 15.0
coord: 70..101
e-value: 0.018
score: 24.2
coord: 210..239
e-value: 0.046
score: 22.9
coord: 245..276
e-value: 0.0024
score: 27.1 |
| IPR002110 | Ankyrin repeat | PFAM | PF12796 | Ank_2 | coord: 211..270
e-value: 3.0E-9
score: 37.3
coord: 140..203
e-value: 9.1E-10
score: 39.0
coord: 1..63
e-value: 1.3E-9
score: 38.5
coord: 69..138
e-value: 8.8E-12
score: 45.5 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 105..137
score: 9.05686 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 140..172
score: 9.11028 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 245..277
score: 9.05686 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | GENE3D | 1.25.40.20 | | coord: 107..166
e-value: 3.1E-15
score: 58.1 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | GENE3D | 1.25.40.20 | | coord: 167..213
e-value: 1.4E-7
score: 33.5
coord: 62..106
e-value: 5.9E-9
score: 37.9 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | GENE3D | 1.25.40.20 | | coord: 214..320
e-value: 4.1E-23
score: 84.1
coord: 1..61
e-value: 7.7E-13
score: 50.3 |
| IPR036770 | Ankyrin repeat-containing domain superfamily | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 1..320 |
| None | No IPR available | PANTHER | PTHR24120:SF4 | GH07239P | coord: 102..301
coord: 1..93
coord: 67..197 |
| None | No IPR available | PANTHER | PTHR24120 | GH07239P | coord: 102..301
coord: 1..93
coord: 67..197 |
| None | No IPR available | PROSITE | PS50297 | ANK_REP_REGION | coord: 245..271
score: 8.852755 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|146878|gw1.39.110.1 ID=Trimin1|146878|gw1.39.110.1|Name=jgi.p|Trimin1|146878|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=320bp
GTTALMLAAINGHVDCVNALRQHDTAVLLHARDSNGGIALMYAAAKGHVR
CVAALLQHDVSVQLNARNSAGCTALMHAAHHGRVACVHALLQHDVAFQLN
ARDNDGGTALMHAARKDHVDCVNALLRHDASAQLNARDSAGGTALMLAAA
GGHADCINTLLQQDASAQLNARDSAGVTALMVAALYGIADCIEGLLQRDA
SIQLAAVPSHGFTALMVATINSHVDCIRALLRRDVPVQLKAHDGTGCTPL
MFAALYGKVDCIRALLRRDASDQLNARDGKGCTAMMYAAIGGDAGSIEAL
LQQDASIQLAASSQNGLTPL back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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