Trimin1|146742|gw1.105.63.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|146742
Unique NameTrimin1|146742|gw1.105.63.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length218
Homology
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BLAST of jgi.p|Trimin1|146742 vs. uniprot
Match: A0A835ZJE4_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJE4_9STRA)

HSP 1 Score: 196 bits (498), Expect = 6.790e-60
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 
Query:    1 TALWLAAQAGRVPVVQYLVDEGSALELPNSLGQTPLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVEAAQXXXXXXXXXXXXXXXXXXXXXXVALENAPRLDVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGRTALYLSAAAGSAGCARKLLNKGAAPGAAAADGTTPLWSAAYGGFDRIVAMLMEKGATAALAT 218
            TALWLAAQAGRVPVVQYLVDEGSALELPNSLGQTPLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVEAAQXXXXXXXXXXXXXXXXXXXXXXVALENAPRLDVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGRTALYLSAAAGSAGCARKLLNKGAAPGAAAADGTTPLWSAAYGGFDRIVAMLMEKGATAALAT
Sbjct:    1 TALWLAAQAGRVPVVQYLVDEGSALELPNSLGQTPLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVEAAQXXXXXXXXXXXXXXXXXXXXXXVALENAPRLDVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGRTALYLSAAAGSAGCARKLLNKGAAPGAAAADGTTPLWSAAYGGFDRIVAMLMEKGATAALAT 218
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BLAST of jgi.p|Trimin1|146742 vs. uniprot
Match: A0A836CMF9_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.150e-7
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0 
Query:    1 TALWLAAQAGRVPVVQYLVDEGSALELPNSLGQTPLY 37
            +ALWLAAQ G++ VVQ+LVDEGSAL+L N+ GQTPLY
Sbjct:   39 SALWLAAQGGKLAVVQFLVDEGSALDLMNASGQTPLY 75
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BLAST of jgi.p|Trimin1|146742 vs. uniprot
Match: C1MS08_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MS08_MICPC)

HSP 1 Score: 52.8 bits (125), Expect = 7.580e-5
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0 
Query:  154 EGRTALYLSAAAGSAGCARKLLNKGAAPGAAAADGTTPLWSAAYGGFDRIVAMLMEKGATA 214
            +G TAL+L+   G A CAR LL++GA+P A   D  TPL  A+ GGFD +VA+L++  A A
Sbjct:  101 DGDTALHLACLYGHAACARLLLSRGASPSARDGDDGTPLHDASAGGFDDVVALLIDAAARA 161
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146742 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZJE4_9STRA6.790e-60100.00Ankyrin repeat-containing domain protein (Fragment... [more]
A0A836CMF9_9STRA7.150e-772.97Ankyrin repeat-containing domain protein (Fragment... [more]
C1MS08_MICPC7.580e-549.18Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 154..183
e-value: 0.15
score: 21.2
coord: 31..60
e-value: 9.0E-4
score: 28.5
coord: 1..27
e-value: 350.0
score: 8.4
coord: 187..216
e-value: 1.2
score: 18.2
coord: 119..148
e-value: 6.8
score: 15.7
coord: 86..115
e-value: 0.77
score: 18.8
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 135..212
e-value: 4.5E-9
score: 36.8
coord: 3..81
e-value: 2.1E-13
score: 50.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 31..63
score: 11.327209
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 154..186
score: 8.629499
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 187..218
score: 9.27054
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..30
score: 9.80474
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 86..118
score: 9.323959
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 81..145
e-value: 5.7E-12
score: 47.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..80
e-value: 1.0E-22
score: 82.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 146..218
e-value: 1.8E-15
score: 58.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..212
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 87..212
coord: 1..146
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 31..59
score: 10.816076
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 187..218
score: 9.250726

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_105contigContig_105:415966..418446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|146742mRNA_12749Tribonema minus UTEX_B_3156 mRNAContig_105 415966..418446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|146742|gw1.105.63.1 ID=Trimin1|146742|gw1.105.63.1|Name=jgi.p|Trimin1|146742|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=218bp
TALWLAAQAGRVPVVQYLVDEGSALELPNSLGQTPLYAACAVGRTEMVKL
LISLGAAVDKPARDGTTPLFAAVANGHVEAAQPARDGTTPLFAAVANGHV
EAAQVALENAPRLDVRARDGRTLLSAAVQCGRDAMMDALLVFKADLDLEA
RDDEGRTALYLSAAAGSAGCARKLLNKGAAPGAAAADGTTPLWSAAYGGF
DRIVAMLMEKGATAALAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf