Trimin1|146713|gw1.98.40.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|146713
Unique NameTrimin1|146713|gw1.98.40.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length80
Homology
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BLAST of jgi.p|Trimin1|146713 vs. uniprot
Match: A0A836C7K4_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K4_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.410e-31
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 
Query:    1 SRLHGCAVVGDLANTLSQLEQGADLEGQSFCGRTALHYAAFYGHASVVRALLVXXXXXXXXXXXXXXXXXXXXXKGVSCA 80
            SRLHGCAVVGDLANTLSQLEQGADLEGQSFCGRTALHYAAFYGHASVVRALLVXXXXXXXXXXXXXXXXXXXXXKGVSCA
Sbjct:    1 SRLHGCAVVGDLANTLSQLEQGADLEGQSFCGRTALHYAAFYGHASVVRALLVXXXXXXXXXXXXXXXXXXXXXKGVSCA 80
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BLAST of jgi.p|Trimin1|146713 vs. uniprot
Match: A0A6H5JU77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU77_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 2.110e-6
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    2 RLHGCAVVGDLANTLSQLEQGADLEGQSFCGRTALHYAAF 41
            +LH  +VVGDLA     ++ G +LE QSFCGRTALHYAAF
Sbjct:  380 QLHKASVVGDLAAISRFIKDGGNLEAQSFCGRTALHYAAF 419
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146713 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836C7K4_9STRA3.410e-31100.00Ankyrin repeat-containing domain protein (Fragment... [more]
A0A6H5JU77_9PHAE2.110e-662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 31..60
e-value: 2.9E-5
score: 33.5
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 3..76
e-value: 2.2E-9
score: 37.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 31..63
score: 12.66271
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..78
e-value: 2.0E-16
score: 61.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..76
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 31..59
score: 12.22224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_98contigContig_98:435620..435859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|146713mRNA_14926Tribonema minus UTEX_B_3156 mRNAContig_98 435620..435859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|146713|gw1.98.40.1 ID=Trimin1|146713|gw1.98.40.1|Name=jgi.p|Trimin1|146713|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=80bp
SRLHGCAVVGDLANTLSQLEQGADLEGQSFCGRTALHYAAFYGHASVVRA
LLVAGADANSPGGGRSSALHFAAYKGVSCA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf