Trimin1|146441|gw1.492.1.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|146441
Unique NameTrimin1|146441|gw1.492.1.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length162
Homology
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BLAST of jgi.p|Trimin1|146441 vs. uniprot
Match: A0A836CDE9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE9_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.310e-52
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 QVMHHECEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHXXXXXXXXXXXXXXXXXXXXXXXXXXXRASALTSRTGSGAATLGRASDXXXXXXXXXXXVGMCFKHGGGDRCQHIDNGHISCKASVQS 125
            QVMHHECEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHXXXXXXXXXXXXXXXXXXXXXXXXXXXRASALTSRTGSGAATLGRASDXXXXXXXXXXXVGMCFKHGGGDRCQHIDNGHISCKASVQS
Sbjct:    1 QVMHHECEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHXXXXXXXXXXXXXXXXXXXXXXXXXXXRASALTSRTGSGAATLGRASDXXXXXXXXXXXVGMCFKHGGGDRCQHIDNGHISCKASVQS 125
[Close]
BLAST of jgi.p|Trimin1|146441 vs. uniprot
Match: A0A836CIX9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX9_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.280e-13
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 
Query:    7 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH 37
            CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH
Sbjct:    1 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH 31
[Close]
BLAST of jgi.p|Trimin1|146441 vs. uniprot
Match: A0A836CC28_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC28_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 8.740e-11
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0 
Query:    7 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH 37
            CEVNGCTKQAV RSGSTEFCVMH GGDRCQH
Sbjct:    1 CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQH 31
[Close]
BLAST of jgi.p|Trimin1|146441 vs. uniprot
Match: A0A836CB44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB44_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 8.030e-5
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0 
Query:    7 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH 37
            C ++ CTKQAV    +TEFCV HGGGDRCQ+
Sbjct:    6 CSIDDCTKQAVKGGDATEFCVKHGGGDRCQY 36
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146441 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CDE9_9STRA1.310e-52100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CIX9_9STRA1.280e-13100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CC28_9STRA8.740e-1193.55Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CB44_9STRA8.030e-564.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_492contigContig_492:5957..6547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|146441mRNA_18982Tribonema minus UTEX_B_3156 mRNAContig_492 5957..6547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|146441|gw1.492.1.1 ID=Trimin1|146441|gw1.492.1.1|Name=jgi.p|Trimin1|146441|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=162bp
QVMHHECEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHRNGVVHMCIKHGG
GNRCQHVDEEGHSCRASALTSRTGSGAATLGRASDSAVTSKSGSGAVGMC
FKHGGGDRCQHIDNGHISCKASVQSSKSGSGTAGMCIKHGGSDGCHHTDE
GGNSCTSSAVAS
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