Trimin1|146257|gw1.19.127.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|146257
Unique NameTrimin1|146257|gw1.19.127.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length187
Homology
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A835Z8K0_9STRA (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K0_9STRA)

HSP 1 Score: 347 bits (890), Expect = 1.740e-120
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187
            VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL
Sbjct:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.540e-28
Identity = 78/201 (38.81%), Postives = 109/201 (54.23%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFN--------------AYTWDLSFRAPAGDVPDL 187
            VP  P+ +DL V+SG+ V VA S PLSDGG+ V SY ++WD  PG   VQ + T  +TGPNE Q   T+  DVDEVQ +  S     EVQ +TV+ AS+G+F + LD +A+GGS Q +G+               + +NADA    T+V  I+      +   GPD  +               YTW+++F A  GDVP++
Sbjct:   42 VPEAPARVDLDVMSGDEVAVAFSAPLSDGGSAVQSYEIEWDTDPGTREVQWIKTYADTGPNEIQSITTTADDVDEVQQLIISTNETREVQSITVSDASAGSFMVTLDLTASGGSVQTSGE---------------IAYNADATGGRTSVQGILEA----MKNLGPDSIHNVTSTYDLVSGSTYTYTWNVTFSAAFGDVPEM 223          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A485LG67_9STRA (Aste57867_20656 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG67_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.060e-22
Identity = 73/194 (37.63%), Postives = 101/194 (52.06%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADV---SVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187
            VPGPP+++ LSVL    + V+ +PPLSDGG+ + +Y VDWDP PGV  VQ VTT   TGPNE      S  DVD                      A      G F LQLDT++TGGS +V+G ++G    A+G          D + M  ++N++     +   +V+R+GPD    YTW ++F A  G+ P L
Sbjct:   32 VPGPPATVQLSVLDQNDLFVSFTPPLSDGGSTISAYEVDWDPNPGVQEVQTVTTSTFTGPNEVXXXXXSAADVDXXXXXXXXXXXXXXXXXXXXXXAPGQTLGGGFTLQLDTTSTGGSVRVSG-VIGFSAGASG----------DRSCMMESLNAMANIGPIGIFAVSRTGPDAQGGYTWSITFDASMGNAPQL 214          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: T0S6T2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S6T2_SAPDV)

HSP 1 Score: 101 bits (252), Expect = 1.430e-21
Identity = 70/191 (36.65%), Postives = 97/191 (50.79%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187
            VP PP+S+ L V S E+V VA  PP++DGG+ + +Y VDWDP PGV AVQ +TT   TGPN+ +   TS  D+D V                    A      G F LQLDT+++GGS Q++G +        G    A    +    +  A+ +I      +VTRS  D    Y+W ++F A  G+VP L
Sbjct:   30 VPSPPASVQLVVQSEETVLVAFQPPVTDGGSGISAYAVDWDPNPGVQAVQTITTSTFTGPNQVETITTSAQDIDAVXXXXXXXXXXXXXXXXXXXXAPGQTLGGGFTLQLDTTSSGGSIQLSGVI--------GYTAGATGDRSCVKEILGAMANIGAAGITAVTRSAADAQGGYSWSVTFAAAMGNVPQL 212          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A662Y6P5_9STRA (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6P5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.650e-21
Identity = 71/198 (35.86%), Postives = 98/198 (49.49%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITG-ADVS------VTRSGPDKFNAYTWDLSFRAPAGDVPDL 187
            VP  P ++ L VL  +++ V   PPL+DGGAPV +Y+V+WDPAPG   VQ V +  NTG NE    ++    V E Q + SSA    EVQ +T + A      G F ++LDT+A+GGS Q +G                + FNA A+     V  I+   A++       V  S  D     TW ++F    GDVP  
Sbjct:   23 VPSAPVNVALDVLGPDALGVTWEPPLTDGGAPVSAYLVEWDPAPGTREVQTVRSSTNTGANEXXXXQSYAGSVQEEQRVTSSALANGEVQTITTSAAPGEVLGGVFTIELDTTASGGSIQRSG---------------VIGFNAQASGSRVGVKEILNAMANIGPSGVQDVVMSPADAQGGITWTITFNTAMGDVPQF 205          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A024UP14_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UP14_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.840e-20
Identity = 73/192 (38.02%), Postives = 99/192 (51.56%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPF-NADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187
            VP  P+++ LSV+    + V+ +PPLSDGG+ + +Y VDWDP PGV  VQ VTT   TGPNE Q   TS  D+                       A      G F LQLDT+ATGGS +++G ++G    A+G  +      NA AN   T V         +V+R+GPD    Y+W ++F A  G+VP L
Sbjct:   33 VPTSPTNVQLSVVDQNDLFVSFAPPLSDGGSTISAYEVDWDPNPGVQEVQTVTTSTYTGPNEVQTVMTSAADIXXXXXXXXXXXXXXXXXXXXXXXAPGQTLGGGFTLQLDTTATGGSVRLSG-VIGFTAGASGDRSCMREILNAMANIGPTGV--------FAVSRTGPDAQGGYSWAITFDASMGNVPQL 215          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A067CNY2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CNY2_SAPPC)

HSP 1 Score: 91.7 bits (226), Expect = 4.280e-18
Identity = 72/193 (37.31%), Postives = 96/193 (49.74%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVT----RASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVP--FNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187
            VP  P+S+ L V S E+V VA  PP +DGG+ + +Y VDWDP PGV  VQ +TT   TGPN+ +   TS  D+D V                       +   G F LQLDT+++GGS Q++G +   +T       + V     A AN   T     ITG    VTRS  D    Y+W ++F A  G+VP L
Sbjct:    3 VPSSPTSVQLVVQSEETVLVAFQPPATDGGSGISAYAVDWDPNPGVQEVQTITTSTFTGPNQVETITTSAQDIDAVXXXXXXXXXXXXXXXXXXXXXXGQTLGGGFTLQLDTTSSGGSIQLSGVI--GYTAGETGDRSCVKEILGAMANIGATG----ITG----VTRSVADAQGGYSWSVTFAAAMGNVPQL 185          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A6A5AH05_9STRA (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AH05_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.690e-17
Identity = 72/192 (37.50%), Postives = 94/192 (48.96%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPF-NADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187
            VP  P+++ LSV+    + V+ SPPLSDGG+ V +Y VDWDP PGV  VQ VTT   TG N       S  DV                       A      G F LQLDT++TGGS +++G ++G    A+G  +      NA AN   T V         +V+RSGPD    Y W ++F A  G+VP L
Sbjct:   33 VPTSPTNVQLSVVDQHDLFVSFSPPLSDGGSTVSAYEVDWDPNPGVQEVQTVTTSTYTGANXXXXXXXSAADVXXXXXXXXXXXXXXXXXXXXXXAAPGQTLGGGFTLQLDTTSTGGSVRLSG-VIGFTAGASGDRSCMKEILNAMANIGPTGV--------FAVSRSGPDTQGGYAWSITFDASMGNVPQL 215          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: W4GP16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP16_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.700e-17
Identity = 72/192 (37.50%), Postives = 94/192 (48.96%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPF-NADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187
            VP  P+++ LSV+    + V+ SPPLSDGG+ V +Y VDWDP PGV  VQ VTT   TG N       S  DV                       A      G F LQLDT++TGGS +++G ++G    A+G  +      NA AN   T V         +V+RSGPD    Y W ++F A  G+VP L
Sbjct:   33 VPTSPTNVQLSVVDQHDLFVSFSPPLSDGGSTVSAYEVDWDPNPGVQEVQTVTTSTYTGANXXXXXXXSAADVXXXXXXXXXXXXXXXXXXXXXXAAPGQTLGGGFTLQLDTTSTGGSVRLSG-VIGFTAGASGDRSCMKEILNAMANIGPTGV--------FAVSRSGPDTQGGYAWSITFDASMGNVPQL 215          
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: F0YFV5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV5_AURAN)

HSP 1 Score: 77.0 bits (188), Expect = 5.060e-13
Identity = 64/193 (33.16%), Postives = 86/193 (44.56%), Query Frame = 0
Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTR----ASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNA--YTWDLSFRAPAGDVPDL 187
            VP  P+   L V+SG+S+ +A + P++DGGA V SY V+WD  PG   VQ VTT    G NE Q   TS  D+D                    T       +GTFAL LDT  TGGS Q TG +        G              M  A++++ +G   +V+R   D      + W ++F     DVP L
Sbjct:   31 VPSAPTDALLEVVSGDSLALAWASPMTDGGAAVQSYQVEWDTNPGRAEVQTVTTSTYIGANELQTISTSAADIDXXXXXXXXXXXXXXXXXXXATAPVGGTLAGTFALALDTRVTGGSLQYTGAIPADAATCCG--------RTSMTAMVEALSNVGSGNVYNVSREAVDVDGGVGWRWRVTFDRSLADVPQL 215          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146257 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A835Z8K0_9STRA1.740e-120100.00Fibronectin type-III domain-containing protein (Fr... [more]
D7FNA6_ECTSI1.540e-2838.81Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
A0A485LG67_9STRA3.060e-2237.63Aste57867_20656 protein n=1 Tax=Aphanomyces stella... [more]
T0S6T2_SAPDV1.430e-2136.65Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A662Y6P5_9STRA4.650e-2135.86Fibronectin type-III domain-containing protein (Fr... [more]
A0A024UP14_9STRA7.840e-2038.02Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A067CNY2_SAPPC4.280e-1837.31Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A6A5AH05_9STRA1.690e-1737.50Fibronectin type-III domain-containing protein (Fr... [more]
W4GP16_9STRA3.700e-1737.50Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
F0YFV5_AURAN5.060e-1333.16Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 1..79
e-value: 3.0E-7
score: 32.5
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 4..98
score: 10.414571
IPR003961Fibronectin type IIICDDcd00063FN3coord: 2..58
e-value: 3.51139E-4
score: 36.3203
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:923516..926900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|146257mRNA_5543Tribonema minus UTEX_B_3156 mRNAContig_19 923516..926900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|146257|gw1.19.127.1 ID=Trimin1|146257|gw1.19.127.1|Name=jgi.p|Trimin1|146257|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=187bp
VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQ
VVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSG
TFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVN
SIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf