mRNA_5543 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|146257
Unique Name	mRNA_5543
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A835Z8K0_9STRA (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K0_9STRA)

HSP 1 Score: 347 bits (890), Expect = 1.740e-120
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 561
            VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL
Sbjct:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 187

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BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.540e-28
Identity = 78/201 (38.81%), Postives = 109/201 (54.23%), Query Frame = 1

Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFN--------------AYTWDLSFRAPAGDVPDL 561
            VP  P+ +DL V+SG+ V VA S PLSDGG+ V SY ++WD  PG   VQ + T  +TGPNE Q   T+  DVDEVQ +  S     EVQ +TV+ AS+G+F + LD +A+GGS Q +G+               + +NADA    T+V  I+      +   GPD  +               YTW+++F A  GDVP++
Sbjct:   42 VPEAPARVDLDVMSGDEVAVAFSAPLSDGGSAVQSYEIEWDTDPGTREVQWIKTYADTGPNEIQSITTTADDVDEVQQLIISTNETREVQSITVSDASAGSFMVTLDLTASGGSVQTSGE---------------IAYNADATGGRTSVQGILEA----MKNLGPDSIHNVTSTYDLVSGSTYTYTWNVTFSAAFGDVPEM 223

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BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A485LG67_9STRA (Aste57867_20656 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG67_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.060e-22
Identity = 73/194 (37.63%), Postives = 101/194 (52.06%), Query Frame = 1

Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADV---SVTRSGPDKFNAYTWDLSFRAPAGDVPDL 561
            VPGPP+++ LSVL    + V+ +PPLSDGG+ + +Y VDWDP PGV  VQ VTT   TGPNE      S  DVD                      A      G F LQLDT++TGGS +V+G ++G    A+G          D + M  ++N++     +   +V+R+GPD    YTW ++F A  G+ P L
Sbjct:   32 VPGPPATVQLSVLDQNDLFVSFTPPLSDGGSTISAYEVDWDPNPGVQEVQTVTTSTFTGPNEVXXXXXSAADVDXXXXXXXXXXXXXXXXXXXXXXAPGQTLGGGFTLQLDTTSTGGSVRVSG-VIGFSAGASG----------DRSCMMESLNAMANIGPIGIFAVSRTGPDAQGGYTWSITFDASMGNAPQL 214

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BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: T0S6T2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S6T2_SAPDV)

HSP 1 Score: 101 bits (252), Expect = 1.430e-21
Identity = 70/191 (36.65%), Postives = 97/191 (50.79%), Query Frame = 1

Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 561
            VP PP+S+ L V S E+V VA  PP++DGG+ + +Y VDWDP PGV AVQ +TT   TGPN+ +   TS  D+D V                    A      G F LQLDT+++GGS Q++G +        G    A    +    +  A+ +I      +VTRS  D    Y+W ++F A  G+VP L
Sbjct:   30 VPSPPASVQLVVQSEETVLVAFQPPVTDGGSGISAYAVDWDPNPGVQAVQTITTSTFTGPNQVETITTSAQDIDAVXXXXXXXXXXXXXXXXXXXXAPGQTLGGGFTLQLDTTSSGGSIQLSGVI--------GYTAGATGDRSCVKEILGAMANIGAAGITAVTRSAADAQGGYSWSVTFAAAMGNVPQL 212

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BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A662Y6P5_9STRA (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6P5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.650e-21
Identity = 71/198 (35.86%), Postives = 98/198 (49.49%), Query Frame = 1

Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASS----GTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITG-ADVS------VTRSGPDKFNAYTWDLSFRAPAGDVPDL 561
            VP  P ++ L VL  +++ V   PPL+DGGAPV +Y+V+WDPAPG   VQ V +  NTG NE    ++    V E Q + SSA    EVQ +T + A      G F ++LDT+A+GGS Q +G                + FNA A+     V  I+   A++       V  S  D     TW ++F    GDVP  
Sbjct:   23 VPSAPVNVALDVLGPDALGVTWEPPLTDGGAPVSAYLVEWDPAPGTREVQTVRSSTNTGANEXXXXQSYAGSVQEEQRVTSSALANGEVQTITTSAAPGEVLGGVFTIELDTTASGGSIQRSG---------------VIGFNAQASGSRVGVKEILNAMANIGPSGVQDVVMSPADAQGGITWTITFNTAMGDVPQF 205

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BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: F0YFV5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV5_AURAN)

HSP 1 Score: 77.0 bits (188), Expect = 5.060e-13
Identity = 64/193 (33.16%), Postives = 86/193 (44.56%), Query Frame = 1

Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTR----ASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNA--YTWDLSFRAPAGDVPDL 561
            VP  P+   L V+SG+S+ +A + P++DGGA V SY V+WD  PG   VQ VTT    G NE Q   TS  D+D                    T       +GTFAL LDT  TGGS Q TG +        G              M  A++++ +G   +V+R   D      + W ++F     DVP L
Sbjct:   31 VPSAPTDALLEVVSGDSLALAWASPMTDGGAAVQSYQVEWDTNPGRAEVQTVTTSTYIGANELQTISTSAADIDXXXXXXXXXXXXXXXXXXXATAPVGGTLAGTFALALDTRVTGGSLQYTGAIPADAATCCG--------RTSMTAMVEALSNVGSGNVYNVSREAVDVDGGVGWRWRVTFDRSLADVPQL 215

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BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A8K1FHK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK2_PYTOL)

HSP 1 Score: 75.9 bits (185), Expect = 1.260e-12
Identity = 63/190 (33.16%), Postives = 90/190 (47.37%), Query Frame = 1

Query:    4 PGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVT----RASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 561
            P  P ++ LS +S +S+ V   PP  DGGAP+ +Y+V+WDP PGV  VQVV T             T   DVD                             G F L+LDT+ +GGS Q++G ++G    A G      P N+ A  +  A+++I T    +V+R+GPD    YTW ++F A  G+ P  
Sbjct:   32 PSAPLNVRLSTVSQDSLHVEWEPPARDGGAPISAYLVEWDPNPGVREVQVVQTSTXXXXXXXXXXXTYAGDVDXXXXXXXXXXXXXXXXXXXXXXXPGETLGGVFTLELDTTTSGGSKQLSG-VIGFDAPAIG------PRNSVAEILK-AMSNIGTSGIQTVSRTGPDAQGGYTWLVTFAASMGNAPQF 213

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BLAST of jgi.p|Trimin1|146257 vs. uniprot
Match: A0A3R7NFQ5_9STRA (Fibronectin type-III domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NFQ5_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.550e-10
Identity = 62/198 (31.31%), Postives = 82/198 (41.41%), Query Frame = 1

Query:    1 VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQVVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVT----RASSGTFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADAN-------TMTTAVNSIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL 561
            VP PP ++ L VL  +++ V+  PP+SDGGAPV +Y+V+WDP PG   VQVV T  N               V E Q                          G F L+LDT ATGGS Q +G                + FNA  +        +  A+ +I      SV +S  D     TW + F    G+VP L
Sbjct:   26 VPSPPLNVALGVLGPDALAVSWEPPISDGGAPVSAYLVEWDPDPGAREVQVVQTSANXXXXXXXXXXXYAGRVREKQRXXXXXXXXXXXXXXXXXXXXGETLGGVFTLELDTRATGGSVQRSG---------------VIGFNARTSGDRSGLLEILNAMQNIGPSGVQSVQKSTADAQGGITWTILFSTAMGNVPQL 208

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|146257 vs. uniprot

BLAST of jgi.p|Trimin1|146257 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8


Match Name	E-value	Identity	Description
A0A835Z8K0_9STRA	1.740e-120	100.00	Fibronectin type-III domain-containing protein (Fr...	[more]
D7FNA6_ECTSI	1.540e-28	38.81	Similar to titin isoform N2-B n=1 Tax=Ectocarpus s...	[more]
A0A485LG67_9STRA	3.060e-22	37.63	Aste57867_20656 protein n=1 Tax=Aphanomyces stella...	[more]
T0S6T2_SAPDV	1.430e-21	36.65	Uncharacterized protein n=1 Tax=Saprolegnia diclin...	[more]
A0A662Y6P5_9STRA	4.650e-21	35.86	Fibronectin type-III domain-containing protein (Fr...	[more]
F0YFV5_AURAN	5.060e-13	33.16	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A8K1FHK2_PYTOL	1.260e-12	33.16	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3R7NFQ5_9STRA	2.550e-10	31.31	Fibronectin type-III domain-containing protein n=3...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_19	contig	Contig_19:923516..926900 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|146257\|gw1.19.127.1
BRITE	ko00000,ko00001,ko01000,ko01001,ko04131,ko04147,ko04812
KEGG Pathway	ko05410,ko05414,map05410,map05414
KEGG ko	ko:K12567
EC	2.7.11.1
Description	cytoskeletal protein binding
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG0613@1\|root,KOG0613@2759\|Eukaryota
Evalue	2.52e-29
Seed ortholog	2880.D7FNA6
Hectar predicted targeting category	other localisation
TranscriptId	146579
Track	FilteredModels1
ProteinId	146257

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|146257	gene_5543	Tribonema minus UTEX_B_3156	gene	Contig_19 923516..926900 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5543_1	exon_5543_1	Tribonema minus UTEX_B_3156	exon	Contig_19 923516..923880 +
exon_5543_2	exon_5543_2	Tribonema minus UTEX_B_3156	exon	Contig_19 926705..926900 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5543	CDS_5543	Tribonema minus UTEX_B_3156	CDS	Contig_19 923516..923880 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|146257	Trimin1\|146257\|gw1.19.127.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_19 923516..926900 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_19:923516..926900+
coding sequence from alignment at Contig_19:923516..926900+

spliced messenger RNA

>mRNA_5543 ID=mRNA_5543|Name=jgi.p|Trimin1|146257|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=561bp|location=Sequence derived from alignment at Contig_19:923516..926900+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGCCGGGGCCCCCCTCCTCCCTAGATCTCTCAGTGCTCAGCGGCGAGAG
CGTGCGCGTCGCGCTGTCGCCGCCCCTCAGCGACGGCGGCGCGCCCGTCA
TGAGCTACGTGGTGGACTGGGACCCCGCGCCGGGGGTGCCTGCGGTGCAG
GTCGTGACGACGCGCGTCAACACGGGCCCCAACGAGGCGCAGCGCTGCCG
CACGTCCGTCACCGACGTCGACGAGGTGCAGCTCATCGCGTCGAGCGCGA
CGCCGGTAGCGGAGGTGCAGCGCGTGACGGTCACGCGCGCGTCGTCGGGG
ACATTCGCGCTGCAGCTGGACACGAGCGCAACCGGCGGCAGCGCGCAGGT
CACGGGCGACCTGCTCGGCTCCTTCACCCTCGCCAACGGCGCCGCCACCG
CCGCCGTACCCTTCAACGCCGACGCCAACACCATGACCACCGCCGTTAAC
TCCATCATCACCGGCGCCGACGTGTCTGTCACGCGCTCCGGCCCCGACAA
GTTCAACGCGTACACGTGGGACCTCTCGTTCCGCGCGCCCGCGGGCGACG
TGCCAGATCTC

protein sequence of jgi.p|Trimin1|146257

>Trimin1|146257|gw1.19.127.1 ID=Trimin1|146257|gw1.19.127.1|Name=jgi.p|Trimin1|146257|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=187bp
VPGPPSSLDLSVLSGESVRVALSPPLSDGGAPVMSYVVDWDPAPGVPAVQ
VVTTRVNTGPNEAQRCRTSVTDVDEVQLIASSATPVAEVQRVTVTRASSG
TFALQLDTSATGGSAQVTGDLLGSFTLANGAATAAVPFNADANTMTTAVN
SIITGADVSVTRSGPDKFNAYTWDLSFRAPAGDVPDL

mRNA from alignment at Contig_19:923516..926900+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5543 ID=mRNA_5543|Name=jgi.p|Trimin1|146257|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3385bp|location=Sequence derived from alignment at Contig_19:923516..926900+ (Tribonema minus UTEX_B_3156 )
GTGCCGGGGCCCCCCTCCTCCCTAGATCTCTCAGTGCTCAGCGGCGAGAG
CGTGCGCGTCGCGCTGTCGCCGCCCCTCAGCGACGGCGGCGCGCCCGTCA
TGAGCTACGTGGTGGACTGGGACCCCGCGCCGGGGGTGCCTGCGGTGCAG
GTCGTGACGACGCGCGTCAACACGGGCCCCAACGAGGCGCAGCGCTGCCG
CACGTCCGTCACCGACGTCGACGAGGTGCAGCTCATCGCGTCGAGCGCGA
CGCCGGTAGCGGAGGTGCAGCGCGTGACGGTCACGCGCGCGTCGTCGGGG
ACATTCGCGCTGCAGCTGGACACGAGCGCAACCGGCGGCAGCGCGCAGGT
CACGGGCGACCTGCTGTGGGACGTGGACGACGCGACGTTCCTGGCGGCGC
TGCGCGCGCTGCAGAACGCGGCGCTGAGCGATGGCACGCAGCTGGTGGCG
GCGGTGGTGGGGTCGGTGCCGGCCGTGGACGCGGACGGACTGACCACAAA
ACACTGGGTGAGTGCGCGAAGGACTATGCAATGCCAGTGTGAGAAGCTGA
CACTGCCTTGGTGTCGGATGTGGTGGGCGGTCGTGCGTGCGATCGCAGCA
GCAGCAGCAGCAGCAACGCTTGCAGATGATTGGAGGGAACTGCAGGGGGA
GGGTGTTGCTGGCGCATTGGCGGGAGTGTAGACCAGCCTCCGCGTTTGTG
TTGAGCACTGCAGCCTTTAGCTGCTTGAATTATGACAGTGGGCACCAGCG
CCGGTGAGGCTCTGAGAGCAAAGTGCGCTGTGTTGCCAGTGTCAGTCAAT
GTCCCTGAAGCCGAGTCTGCGCTGCAGAACACTGCAGCAACCAGGTTTGT
TCTATGTGCTCGTCGTAAACATGCAGAGTTGCCAGCCACATTGTTGCCGT
CGTTGACCACCTCCACAGCTTGTCGATCATGCTTCTGGCTGGGATGGTAG
TGTCATGATCTTTTTCGGAAGCAGGAGGACTTGGTCATCATATTCGTACA
CAGGCACATGAGGCATGATGCGGCAGTGACACATAGCCTCAATTTTTGTG
GAAGAGCTTGATGAAATGGATGTGGAGCAGAGAGGGCGACAAATGTGTGC
TGCCTGTGCAGCGCTGCTCTTGTGGAACTACAACAAACACTGAATAGGAA
TTTGAACTTTTGTACGCTTGACCTGATGTGCATTTATTTACAAGCATGCA
TTGTAGTATTTCTGCAAGCGCCAAGTAATTTGCGCACCCACGACATTGAC
TAGCTCACCACGGACCACAGCGGGTTACGCCGGTGCGCAGGGGATGTCTG
GCACAGTGACTGGTGGTTCATGACGTTGCAGCAGACAAAGCGCAACTGTG
GACGCGCCTGTCACAAGCAGTTTAGACACTGCATTGAAGTGTGATTATCT
CTACATTCTGTTTTCGGTACTCGCACCTGTGAAGTGCTCCTATATAGTGT
AGCGCACAGCCGACGTTTTTTGTCAGTGTACCTCTTCCATCGCGCGTGAT
ACTGGGAGAGGCTTCATACCAGCAGGTGCCTTCCACAGCATCAAAGCATG
TCATTGGTTGCACCATACGACCAACATGACAAGCGCCTGCTGGCCGTAGC
TGCACGCGCAGGCGCACCAGTCCTCTCCCAGCACGTCAGCCTCTTTGACA
GTTACGCCTTCAACACGCACCCCTGAGCGCTGTTGCGTCCAGCTGCACAT
TGCTCACTCATCGCTGCCGCGCGCGCCGCCGCCGCCCACAGGACGTCACG
TTTGCGCTGGAGTTCGGCAACGTGCCGGAGATGACGCCGGCAGTGGACGT
TGTCACGCTAGGCCCCGACCCTGGAGCAGACGTAGGCGTCACGACGGTGA
CGGACGGCAATGTTATCGATGACAAGACCATCTCGGTGACGTTTGCGGGG
GAGACGGCGACCATTGCGTACGATGCCACGGCGGAGGACGTGCGCGCGGC
GCTGGTTGGCCTGTCCACCATTGACAGCGTGGACGTCACGCGGAGCACTG
TGCCGGACTACCAGGTGAGCGCTGCTGCAGAGCTTGCATCAGACAGTCAG
GGTGCGTATGTCGAGCTTAGGTTAGGGTTAGATTTAGAGTTAATTTACGG
GGGACCAGGGCCGGAAGTGGGCAGTTGACCTGTGACCACCGTGGTGTTGA
GCACTGTGCCCGTGTGTGCAAGATTTGACATGAAGTGTCGAGCGCTGAGG
CCATTGGGCGCGTCCATCAAGCTTGCAGATGTTTGGCTGAAGGATGACAA
TGATGCGCAATGCGTTGCGCGCCTTGCGTTCAACTGGGCTAGGGCTTTTG
CAGCGCGCCATTGATATCACATGCCAGCGAATGTCTGCCAGTGCACCACT
GCAGCCACTAACATGTTTGCTCTTGAGGTTGCAGTAGTGTCTCGTGCTGC
TGCAGATGGCTGACCTTGCATGCGCACAGCGTCGCATTCCCTGCTGCCAG
TCACTGTAGCCATGGGCGTTACAGTGTCCTTTACACGCAACAATGCTCAG
CACTAGCCGAAAAACGATGTTTGCATAGAAATGACAGTTGACGATGCGCA
GCGCTCAATTAGGCAGGACCAGTGACCAGTGCTGTGGTTTTCTAACGGGA
CTCTGCCTTTACATCAACTTTGCACTCATATTTGTCCTGCCCACGGGCCT
GGTGACCCTTGCTAATTCGCGGTGCTGCGAGCAGGGAGGACACACGTGGA
GCGTCACCTTCAGCAGCCCCGCGCACGACGGCCTGCTGCTGGACGCGCTG
TCGTGCACGCACACGCTGGTGGCGGTTGGAGCGCACGTCACCTGCGGACG
TGAGTGCGACACATGTCGCTTATTAAGCCGCTCGCGGTAGACTGGAGCAG
TGGCTGTGCAGTGCTTTGAGAGTGTCGCTCTCCTTGCAGAATGGGGATGG
CGTCGCAATGCTTAGTCTGGGCAGCTGGTGACGCGTCTGCACAGCATATT
GTCAGCATGTTTTCGCAAACTGTCACTTGTGTGACATTGTCATGGTGCAC
TTGAGTCTGGTGGCCAACACCGCCTCATCATCCAGTTTCTCAATGTCGAA
GCATCCACTGCTCACAGCTGCACCCTGAGCTGCCAGGCACTGTGCTCGCA
TACAACCCCCCCCTCACCGCCCCCCCCGTTCCCCCCCCCCCCCCCCCCGT
GCACTCCGAAGACGTCGCCCGGCCCGGCAGCACGCTGAGCGGCTCCTTCA
CCCTCGCCAACGGCGCCGCCACCGCCGCCGTACCCTTCAACGCCGACGCC
AACACCATGACCACCGCCGTTAACTCCATCATCACCGGCGCCGACGTGTC
TGTCACGCGCTCCGGCCCCGACAAGTTCAACGCGTACACGTGGGACCTCT
CGTTCCGCGCGCCCGCGGGCGACGTGCCAGATCTC

Coding sequence (CDS) from alignment at Contig_19:923516..926900+

>mRNA_5543 ID=mRNA_5543|Name=jgi.p|Trimin1|146257|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=561bp|location=Sequence derived from alignment at Contig_19:923516..926900+ (Tribonema minus UTEX_B_3156 )
GTGCCGGGGCCCCCCTCCTCCCTAGATCTCTCAGTGCTCAGCGGCGAGAG
CGTGCGCGTCGCGCTGTCGCCGCCCCTCAGCGACGGCGGCGCGCCCGTCA
TGAGCTACGTGGTGGACTGGGACCCCGCGCCGGGGGTGCCTGCGGTGCAG
GTCGTGACGACGCGCGTCAACACGGGCCCCAACGAGGCGCAGCGCTGCCG
CACGTCCGTCACCGACGTCGACGAGGTGCAGCTCATCGCGTCGAGCGCGA
CGCCGGTAGCGGAGGTGCAGCGCGTGACGGTCACGCGCGCGTCGTCGGGG
ACATTCGCGCTGCAGCTGGACACGAGCGCAACCGGCGGCAGCGCGCAGGT
CACGGGCGACCTGCTCGGCTCCTTCACCCTCGCCAACGGCGCCGCCACCG
CCGCCGTACCCTTCAACGCCGACGCCAACACCATGACCACCGCCGTTAAC
TCCATCATCACCGGCGCCGACGTGTCTGTCACGCGCTCCGGCCCCGACAA
GTTCAACGCGTACACGTGGGACCTCTCGTTCCGCGCGCCCGCGGGCGACG
TGCCAGATCTC