Trimin1|146163|gw1.46.110.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|146163
Unique Name	Trimin1\|146163\|gw1.46.110.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	142

Homology

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BLAST of jgi.p|Trimin1|146163 vs. uniprot
Match: A0A836CDT1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT1_9STRA)

HSP 1 Score: 269 bits (687), Expect = 5.280e-91
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query:    1 FNPSIMTAAAQGGNVPAMQWIKDHCPPLAASSIWEFKAAVRAXXXXXXXXXXXLMEQEYFRPCPNRRRAYGIVLCAAARTGQAAVFVWVRDESSPWRGDDHPMGLAAAGGHLSTVLVLMELGCEATSNSVLNAIRGGHILVL 142
            FNPSIMTAAAQGGNVPAMQWIKDHCPPLAASSIWEFKAAVRAXXXXXXXXXXXLMEQEYFRPCPNRRRAYGIVLCAAARTGQAAVFVWVRDESSPWRGDDHPMGLAAAGGHLSTVLVLMELGCEATSNSVLNAIRGGHILVL
Sbjct:    1 FNPSIMTAAAQGGNVPAMQWIKDHCPPLAASSIWEFKAAVRAXXXXXXXXXXXLMEQEYFRPCPNRRRAYGIVLCAAARTGQAAVFVWVRDESSPWRGDDHPMGLAAAGGHLSTVLVLMELGCEATSNSVLNAIRGGHILVL 142

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|146163 vs. uniprot

BLAST of jgi.p|Trimin1|146163 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CDT1_9STRA	5.280e-91	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2..141 e-value: 4.4E-8 score: 34.1
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 6..125
None	No IPR available	PANTHER	PTHR46586	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 4..141

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_46	contig	Contig_46:451114..451596 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|146163	mRNA_4621	Tribonema minus UTEX_B_3156	mRNA	Contig_46 451114..451596 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|146163|gw1.46.110.1 ID=Trimin1|146163|gw1.46.110.1|Name=jgi.p|Trimin1|146163|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=142bp
FNPSIMTAAAQGGNVPAMQWIKDHCPPLAASSIWEFKAAVRAAESGHVPA
LSWLMEQEYFRPCPNRRRAYGIVLCAAARTGQAAVFVWVRDESSPWRGDD
HPMGLAAAGGHLSTVLVLMELGCEATSNSVLNAIRGGHILVL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf