Trimin1|145651|gw1.49.83.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|145651
Unique NameTrimin1|145651|gw1.49.83.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length270
Homology
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BLAST of jgi.p|Trimin1|145651 vs. uniprot
Match: A0A836CBU9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.080e-15
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 
Query:    1 SKKCDACGLKIPSFGTEDSSPTHCGNCKTSDMRSVCK 37
            SKKCDACGLKIPSFGTEDSSPTHCGNCKTSDMRSVCK
Sbjct:    1 SKKCDACGLKIPSFGTEDSSPTHCGNCKTSDMRSVCK 37
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|145651 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CBU9_9STRA2.080e-15100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 183..215
e-value: 0.15
score: 12.7
coord: 111..142
e-value: 0.096
score: 13.3
coord: 75..107
e-value: 0.01
score: 16.5
coord: 219..253
e-value: 0.011
score: 16.4
coord: 39..71
e-value: 0.013
score: 16.1
coord: 147..179
e-value: 0.098
score: 13.3
coord: 4..35
e-value: 0.93
score: 10.2
NoneNo IPR availableGENE3D6.10.140.110coord: 90..155
e-value: 5.3E-6
score: 28.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_49contigContig_49:835527..836884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|145651mRNA_10499Tribonema minus UTEX_B_3156 mRNAContig_49 835527..836884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|145651|gw1.49.83.1 ID=Trimin1|145651|gw1.49.83.1|Name=jgi.p|Trimin1|145651|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=270bp
SKKCDACGLKIPSFGTEDSSPTHCGNCKTSDMRSVCKKCEQCRLKIPNFG
VEDGRPTHCGDCKTPHMRDVKNKKCEQCGLKQPNFGVEDGSATHCGDCKT
ADMQDVRSKKCEQCGLRRPSFGTEDGSPTHCGDCKTPHMRNVHSKKCDKC
TASHPSFGVEHGRPTHCGDCKTADMRDVKTIKCEQCGLKRPNFGMEDGSP
THCGDCSTAGMRDVRTKKCEECGLKIPSFGVEEEDGRPTHCGDCKTSDMR
NVVSKSCKQCGLKIPSFGVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys