Trimin1|142891|gw1.49.55.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|142891
Unique Name	Trimin1\|142891\|gw1.49.55.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	115

Homology

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A835YQY7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQY7_9STRA)

HSP 1 Score: 256 bits (654), Expect = 7.570e-87
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY
Sbjct:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A835YYR4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR4_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.810e-76
Identity = 98/115 (85.22%), Postives = 110/115 (95.65%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            W+HL T+GDRPCARSGQS+V+V+DKIYVFGGCDGV+VYNDLHC DT THEWSVIHS+GGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSA+SD+WSYDTR R WT++FE+PKALY
Sbjct:   13 WVHLGTYGDRPCARSGQSAVLVRDKIYVFGGCDGVVVYNDLHCLDTVTHEWSVIHSKGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAFSDIWSYDTRHRTWTKMFEAPKALY 127

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A836CDJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ9_9STRA)

HSP 1 Score: 236 bits (603), Expect = 4.400e-76
Identity = 105/115 (91.30%), Postives = 110/115 (95.65%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            WLHL+TFGDRPCARSGQSSVVV+DKIYVFGGCDGV+ YNDLHCFDT  HEWSV+HSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYS  WSYDTRRR+WTELFESPKALY
Sbjct:   13 WLHLNTFGDRPCARSGQSSVVVRDKIYVFGGCDGVVDYNDLHCFDTVMHEWSVMHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSYGWSYDTRRRKWTELFESPKALY 127

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A835Z6H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H5_9STRA)

HSP 1 Score: 219 bits (557), Expect = 9.790e-69
Identity = 95/115 (82.61%), Postives = 106/115 (92.17%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            WLHL+TFGDRPCARSG S+VVV  KIYVFGGCDGV VYNDLH FDT THEWSVIH+EGGPTPRAAFGMCAGPG EDFTIACGSNTQ+MSA++D+W ++TRRR WT++FESPKALY
Sbjct:   13 WLHLNTFGDRPCARSGHSAVVVGGKIYVFGGCDGVAVYNDLHRFDTVTHEWSVIHAEGGPTPRAAFGMCAGPGEEDFTIACGSNTQHMSAFADIWRFNTRRRAWTKMFESPKALY 127

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A835ZA21_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA21_9STRA)

HSP 1 Score: 217 bits (552), Expect = 6.400e-68
Identity = 94/115 (81.74%), Postives = 107/115 (93.04%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            W+ L+TFGD PCARSG ++VVV+ KIYVFGGCDGV+VYNDLH FDTATHEWS IHSEGGPTPRAAFGMCAGPG +DFTIACGS+TQYMSA+SD+WS++TRRR WT+LFESPKALY
Sbjct:   13 WVLLNTFGDPPCARSGHAAVVVRGKIYVFGGCDGVVVYNDLHWFDTATHEWSAIHSEGGPTPRAAFGMCAGPGEDDFTIACGSDTQYMSAFSDIWSFNTRRRTWTKLFESPKALY 127

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A835Z6E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E7_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.890e-66
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            W+ L+TFG+ PCARSG ++V+V+ KIYVFGGCDG +VYNDLHCFDT THEW VI SEG PTPRAAFGMCAGPG EDFTIACGSNTQ+MSAYSDVWS++TR R WT+LFESPKALY
Sbjct:   13 WVLLNTFGNPPCARSGHAAVIVRGKIYVFGGCDGDVVYNDLHCFDTVTHEWRVIMSEGAPTPRAAFGMCAGPGDEDFTIACGSNTQFMSAYSDVWSFNTRHRTWTQLFESPKALY 127

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A835Z2J9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J9_9STRA)

HSP 1 Score: 211 bits (538), Expect = 4.440e-65
Identity = 92/107 (85.98%), Postives = 100/107 (93.46%), Query Frame = 0

Query:    9 DRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            DRPCARSGQS+V+V DKIYVFGGCDGV+VYNDLHCFDT THEW V+HSEGGPTPRAAFGMC GPG EDFTIACGSNTQ+MSAYSDVWS++TR R WT+LFESPKALY
Sbjct:   85 DRPCARSGQSAVLVGDKIYVFGGCDGVVVYNDLHCFDTVTHEWRVVHSEGGPTPRAAFGMCVGPGDEDFTIACGSNTQFMSAYSDVWSFNTRHRTWTKLFESPKALY 191

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A836CD99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD99_9STRA)

HSP 1 Score: 153 bits (386), Expect = 4.570e-43
Identity = 66/115 (57.39%), Postives = 82/115 (71.30%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            WL L TFGD P  RSGQ + VV   +Y+FGGCD V+  ND++ FD  THEW  +  + GP+PRAAFGMC+GPG  DFT+ACG      SA SD+WS+D RRR+W +LFESP+A Y
Sbjct:   13 WLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVM-QNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAY 126

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A836C6J2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6J2_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.530e-42
Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            W  L T G  P + SGQ + VV +++Y+FGGCDG +  ND+HCFD  T++W  I  + GP+PRAAFGMC+GPG   FT+ACG   + MSA  D+WS+D R   W++LFESP+A+Y
Sbjct:    2 WSQLRTCGKVPSSLSGQGAAVVDERVYMFGGCDGEVALNDVHCFDVQTNKWCAIVCQEGPSPRAAFGMCSGPGEYAFTVACGCGIEQMSALGDMWSFDVRHHTWSKLFESPQAMY 116

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BLAST of jgi.p|Trimin1|142891 vs. uniprot
Match: A0A835YN69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN69_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.490e-39
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 0

Query:    1 WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHEWSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTRRRQWTELFESPKALY 115
            W  L+T GD PCARSGQ +VVV D +Y+FGGCDG  V ND+  F   T EW  I  + GP+ R +FG+C GPG ED T+ACG N     A +D+WS++ R R WT+ F+SP+ALY
Sbjct:   16 WRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALY 130

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|142891 vs. uniprot

BLAST of jgi.p|Trimin1|142891 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YQY7_9STRA	7.570e-87	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835YYR4_9STRA	1.810e-76	85.22	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CDJ9_9STRA	4.400e-76	91.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z6H5_9STRA	9.790e-69	82.61	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZA21_9STRA	6.400e-68	81.74	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835Z6E7_9STRA	2.890e-66	79.13	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z2J9_9STRA	4.440e-65	85.98	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CD99_9STRA	4.570e-43	57.39	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C6J2_9STRA	1.530e-42	52.17	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YN69_9STRA	2.490e-39	53.04	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 1..115 e-value: 5.1E-24 score: 86.9
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 7..109
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 13..53 e-value: 5.0E-12 score: 45.2
None	No IPR available	PANTHER	PTHR46647	RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFS	coord: 1..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_49	contig	Contig_49:352613..352957 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|142891	mRNA_10459	Tribonema minus UTEX_B_3156	mRNA	Contig_49 352613..352957 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|142891|gw1.49.55.1 ID=Trimin1|142891|gw1.49.55.1|Name=jgi.p|Trimin1|142891|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=115bp
WLHLHTFGDRPCARSGQSSVVVKDKIYVFGGCDGVIVYNDLHCFDTATHE
WSVIHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSDVWSYDTR
RRQWTELFESPKALY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015915	Kelch-typ_b-propeller
IPR006652	Kelch_1