Trimin1|141632|gw1.88.77.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|141632
Unique NameTrimin1|141632|gw1.88.77.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length186
Homology
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A835YJN6_9STRA (ATPase_AAA_core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN6_9STRA)

HSP 1 Score: 359 bits (922), Expect = 2.140e-125
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186
            MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR
Sbjct:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A835ZFP4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP4_9STRA)

HSP 1 Score: 256 bits (654), Expect = 5.370e-76
Identity = 135/160 (84.38%), Postives = 144/160 (90.00%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGY-ADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAED 159
            MGRMFKELGVLQSDEVI  SPADFTTGFAGGQAAIRTKEMLNKALGR LFIDEAYGLNPQR+ SA IMQEVVDQIVQSLTDERF+GKLVV++AGY A D++ALM ANAGLASRFGTTIHFPDF   DAAE LRR LRS+RMGCLELS +AA ALP MA+D
Sbjct:  761 MGRMFKELGVLQSDEVISCSPADFTTGFAGGQAAIRTKEMLNKALGRTLFIDEAYGLNPQRALSAGIMQEVVDQIVQSLTDERFRGKLVVILAGYPAADMDALMTANAGLASRFGTTIHFPDFTALDAAEVLRRALRSERMGCLELSSAAAEALPTMAQD 920          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: D8LJR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR0_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 3.070e-47
Identity = 94/187 (50.27%), Postives = 128/187 (68.45%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSA-AIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186
            +GRMFK+L V+ SD+V+  SP+DFTTGF G QAA++TKE+L+KA+G+VLFIDEAYGLNP+      + MQEVVDQ+ Q LTD+++KG +VVVVAGYA DI+ LM +N GLASRF  T+HFP+F  +D    L   L+  RM   +L+P A  AL  +   +     F NGR++ +    +F  +  R
Sbjct: 2431 VGRMFKQLSVIHSDDVVSCSPSDFTTGFIG-QAALKTKEILDKAIGKVLFIDEAYGLNPRHGGGTWSFMQEVVDQLTQCLTDDKYKGNMVVVVAGYAHDIDELMESNPGLASRFPETLHFPNFGVDDCCRMLESSLK--RMFSTDLAPEATGALRGLLLPVLQAPRFGNGRTITDLTKHIFTEIGMR 2614          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A7S1DUH3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DUH3_HEMAN)

HSP 1 Score: 158 bits (400), Expect = 7.530e-45
Identity = 91/186 (48.92%), Postives = 116/186 (62.37%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186
            MGRMF+  G+L +DEV+ TS +DF TG+ G QA   T +++ KA G+VLFIDEAY LNP+       M EVVD+IV+SLT E  K K+VV++AGY  D++ +++ N G+ SRF   I FPD   E AA  L   LRSD    L+  P   AAL  +A  LAA   FANGR V  W+  VF  VA R
Sbjct:   73 MGRMFRSFGLLPTDEVVETSASDFVTGYVG-QAGKTTADIMTKAKGKVLFIDEAYQLNPRIG--GGYMSEVVDEIVKSLTSENLKNKMVVILAGYESDVDDMLKVNQGMRSRFSEKIAFPDISAETAAAMLTSKLRSDHGLTLDPPPEDTAALLGLAGRLAAAPNFANGRDVETWSKRVFQHVASR 255          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A835SB85_CHLIN (RabBD domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SB85_CHLIN)

HSP 1 Score: 165 bits (417), Expect = 9.570e-44
Identity = 94/186 (50.54%), Postives = 125/186 (67.20%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186
            +G +F+ LG+L S EV+  S +DF TG+   QA+ +T+E+  KA+G VLFIDEAY LNP++    A MQE +D++VQ LT+  + GK+VV++AGY ++IE LM  N GL SRF   +HFPDF   DAA+ L   LR +    LEL   AAAALP MA+DLAA   +ANGR V  WA  +FAA + R
Sbjct: 2406 VGLLFESLGLLASSEVVSCSASDFVTGYVN-QASGKTREVFAKAVGGVLFIDEAYRLNPKKG--GAFMQEALDEMVQLLTEPAYMGKMVVILAGYDNEIEELMSVNPGLKSRFSQRLHFPDFSPADAAQLLALQLRKEYG--LELGGDAAAALPGMAQDLAAAPNWANGRDVVTWAKRIFAAYSTR 2586          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A835WSI6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WSI6_9CHLO)

HSP 1 Score: 162 bits (411), Expect = 6.130e-43
Identity = 93/186 (50.00%), Postives = 119/186 (63.98%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186
            +G +F+ LG+L S EV+C S  DF TG+   QA+ +T+E+  KA+G VLFIDEAY LNP+       MQE +D++VQ LT+  + GK+VV++AGY  +IE LM  N GL SRF   +HFPDF   DAA+ L   LR +    LEL   AA ALP MAE LAA   +ANGR V  WA   FAA + R
Sbjct: 2462 VGLLFESLGLLASSEVVCCSANDFVTGYVN-QASGKTREIFAKAVGGVLFIDEAYRLNPKNG--GPFMQEALDEMVQLLTEPTYMGKMVVILAGYDKEIEELMGVNPGLKSRFSQRLHFPDFSPADAAQLLALQLRKEY--ALELDAGAAEALPGMAEQLAAAPNWANGRDVGTWAKRAFAAYSSR 2642          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A835WQ62_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WQ62_9CHLO)

HSP 1 Score: 160 bits (405), Expect = 3.930e-42
Identity = 91/186 (48.92%), Postives = 119/186 (63.98%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186
            +G +F+ LG+L S EV+C S  DF TG+   QA+ +T+E+  KA+G VLFIDEAY LNP++      MQE +D++VQ LT+  + GK+VV++AGY  +IE LM  N GL SRF   +HFPDF   DAA+ L   LR +    LEL   AA ALP M + LAA   +ANGR V  WA   FAA + R
Sbjct: 2443 VGLLFESLGLLASSEVVCCSANDFVTGYVN-QASGKTREIFAKAVGGVLFIDEAYRLNPKKG--GQFMQEALDEMVQLLTEPTYMGKMVVILAGYDKEIEELMGVNPGLKSRFSQRLHFPDFSPADAAQLLALQLRKEY--ALELDAGAAEALPGMTKQLAAAPNWANGRDVGTWAKRAFAAYSSR 2623          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A2K3DU35_CHLRE (Uncharacterized protein n=3 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DU35_CHLRE)

HSP 1 Score: 159 bits (402), Expect = 9.930e-42
Identity = 91/186 (48.92%), Postives = 123/186 (66.13%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186
            +G +F+ LG+L + EV+  S +DF TG+   QA+ +T+E+  KA+G VLFIDEAY LNP++      MQE +D++VQ LT+  + GK+VV++AGY ++IE LM  N GL SRF   +HFPDF   DAA+ L   LR +    LEL   AA ALP MA++LAA   +ANGR V  WA  VFAA + R
Sbjct: 2396 VGLLFESLGLLATSEVVSCSASDFVTGYVN-QASGKTREVFAKAVGGVLFIDEAYRLNPKKG--GPFMQEALDEMVQLLTEPAYMGKMVVILAGYDNEIEELMSVNPGLKSRFSQRLHFPDFTPADAAQLLVLQLRKEYG--LELGGGAAEALPGMAQELAAAPNWANGRDVGTWAKRVFAAYSSR 2576          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A2K3DU41_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DU41_CHLRE)

HSP 1 Score: 155 bits (393), Expect = 1.610e-40
Identity = 89/186 (47.85%), Postives = 122/186 (65.59%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR 186
            +G +F+ LG+L + EV+  S +DF TG+   QA+ +T+E+  KA+G VLFIDEAY L+P++      MQE +D++VQ LT+  + GK+VV++AGY ++IE LM  N GL SRF   +HFPDF   DAA+ L   LR +    LEL   A  ALP MA++LAA   +ANGR V  WA  VFAA + R
Sbjct: 2412 VGLLFESLGLLATSEVVSCSASDFVTGYVN-QASGKTREVFAKAVGGVLFIDEAYRLSPKKG--GPFMQEALDEMVQLLTEPAYMGKMVVILAGYDNEIEELMSVNPGLKSRFSQRLHFPDFTPADAAQLLVLQLRKEYG--LELGGGAVEALPGMAQELAAAPNWANGRDVGTWAKRVFAAYSSR 2592          
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Match: A0A8J5X9I6_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9I6_DIALT)

HSP 1 Score: 155 bits (391), Expect = 2.990e-40
Identity = 89/182 (48.90%), Postives = 118/182 (64.84%), Query Frame = 0
Query:    1 MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLFIDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIEALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAAAALPRMAEDLAATHGFANGRSVNEWANGVFAA 182
            MG +F  LG+L SD+V   S +DF TGF G QAA +T+++   ALG +LFIDEAY L+P+ S     MQEVVD+IV  LT+  F+GK+VV+ AGYAD++EA++ AN+GL SR    IHF D   +DA   L   ++S R   LEL+  A A LP +A  L A  G++NGR V  WA  +F A
Sbjct: 2424 MGTLFHRLGLLPSDDVKQHSASDFCTGFVG-QAASKTRKLFEAALGGILFIDEAYRLHPKHSAGGGFMQEVVDEIVNLLTEPAFQGKMVVIFAGYADEMEAMLDANSGLRSRVTGRIHFADLALDDACALL---VKSVRAKGLELNAEARAELPTLARALIAAPGWSNGRDVATWAKAIFQA 2601          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|141632 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJN6_9STRA2.140e-125100.00ATPase_AAA_core domain-containing protein n=1 Tax=... [more]
A0A835ZFP4_9STRA5.370e-7684.38P-loop containing nucleoside triphosphate hydrolas... [more]
D8LJR0_ECTSI3.070e-4750.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1DUH3_HEMAN7.530e-4548.92Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A835SB85_CHLIN9.570e-4450.54RabBD domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A835WSI6_9CHLO6.130e-4350.00Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A835WQ62_9CHLO3.930e-4248.92Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A2K3DU35_CHLRE9.930e-4248.92Uncharacterized protein n=3 Tax=Chlamydomonas rein... [more]
A0A2K3DU41_CHLRE1.610e-4047.85Uncharacterized protein n=2 Tax=Chlamydomonas rein... [more]
A0A8J5X9I6_DIALT2.990e-4048.90Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000641CbxX/CfxQPRINTSPR00819CBXCFQXSUPERcoord: 108..127
score: 40.0
coord: 36..55
score: 64.06
coord: 91..108
score: 34.03
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 35..119
e-value: 1.0E-4
score: 22.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..120
e-value: 4.0E-22
score: 80.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..158
NoneNo IPR availablePANTHERPTHR43392AAA-TYPE ATPASE FAMILY PROTEIN / ANKYRIN REPEAT FAMILY PROTEINcoord: 1..177
NoneNo IPR availablePANTHERPTHR43392:SF2AAA-TYPE ATPASE FAMILY PROTEIN / ANKYRIN REPEAT FAMILY PROTEINcoord: 1..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:290285..291660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|141632mRNA_11040Tribonema minus UTEX_B_3156 mRNAContig_88 290285..291660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|141632|gw1.88.77.1 ID=Trimin1|141632|gw1.88.77.1|Name=jgi.p|Trimin1|141632|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=186bp
MGRMFKELGVLQSDEVICTSPADFTTGFAGGQAAIRTKEMLNKALGRVLF
IDEAYGLNPQRSPSAAIMQEVVDQIVQSLTDERFKGKLVVVVAGYADDIE
ALMRANAGLASRFGTTIHFPDFKGEDAAEALRRLLRSDRMGCLELSPSAA
AALPRMAEDLAATHGFANGRSVNEWANGVFAAVADR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000641CbxX/CfxQ
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase