Trimin1|141481|gw1.200.18.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|141481
Unique NameTrimin1|141481|gw1.200.18.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length244
Homology
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BLAST of jgi.p|Trimin1|141481 vs. uniprot
Match: A0A835Z5G3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.560e-28
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 
Query:    1 DADLAGMRAHRDNAEVQHAGLKAVVSLARGCAVGQAALVTAGKPDAVXXXXXXXXXXXXXXXXXXXXXXXLAKDSAQXXXXXXXXXXXXXXXXXXXPGVPVQHXXXXXXXNLAQGCAAA 119
            DADLAGMRAHRDNAEVQHAGLKAVVSLARGCAVGQAALVTAGKPDAVXXXXXXXXXXXXXXXXXXXXXXXLAKDSAQXXXXXXXXXXXXXXXXXXXPGVPVQHXXXXXXXNLAQGCAAA
Sbjct:    1 DADLAGMRAHRDNAEVQHAGLKAVVSLARGCAVGQAALVTAGKPDAVXXXXXXXXXXXXXXXXXXXXXXXLAKDSAQXXXXXXXXXXXXXXXXXXXPGVPVQHXXXXXXXNLAQGCAAA 119
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|141481 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z5G3_9STRA2.560e-28100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..244
e-value: 9.7E-19
score: 69.3
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 79..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_200contigContig_200:224970..226115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|141481mRNA_17200Tribonema minus UTEX_B_3156 mRNAContig_200 224970..226115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|141481|gw1.200.18.1 ID=Trimin1|141481|gw1.200.18.1|Name=jgi.p|Trimin1|141481|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=244bp
DADLAGMRAHRDNAEVQHAGLKAVVSLARGCAVGQAALVTAGKPDAVVAG
LCAHRDDAVVQFNGLYAVALLAKDSAQAALVTAGAPDAVVAGLHAHPGVP
VQHNGLYAVANLAQGCAAAQAALVTAGAPDAVVAGLRAHPGVQVQRAGLT
AAFFLTRGCAAGQAALVTAGAPDAVVAGLCAHPSDAGVQRDGLTAAFYLT
RGCAAGQAALVTAGAPDAVVAGLCAHPSDAGVQRFGLLTAAYLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold