Trimin1|141336|gw1.33.90.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|141336
Unique Name	Trimin1\|141336\|gw1.33.90.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	120

Homology

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: A0A835YWF6_9STRA (Alpha/beta knot methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWF6_9STRA)

HSP 1 Score: 243 bits (619), Expect = 2.410e-81
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM
Sbjct:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: UPI001FB743DB (probable methyltransferase TARBP1 n=1 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB743DB)

HSP 1 Score: 141 bits (356), Expect = 1.950e-37
Identity = 64/120 (53.33%), Postives = 91/120 (75.83%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            VPSLAVL+   F +LS+TA QW+P++EVKP++  +YLR  + +GY +VA EQT +S+ LS +SFP +T ++LG+E+ G+P  LL    VCV+IPQ G++RSLN HVSGA+ +WEY RQ +
Sbjct:  386 VPSLAVLEDQTFNSLSLTAQQWVPVKEVKPDNLAEYLRTLQNEGYTLVAAEQTANSKKLSEYSFPERTAVILGNEREGIPCELLQLLDVCVEIPQFGIIRSLNVHVSGALFIWEYTRQHL 505

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: A0A7S2E9B0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E9B0_TRICV)

HSP 1 Score: 132 bits (332), Expect = 2.130e-37
Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            +P ++V + ++F ++S++AA+W+ I+E K ++   +L   K +GY +V LEQT SS CLS  SFP KT+LLLG EK G+P  LL     CV+IPQ G++RSLN HVSGA+A+WEY +Q M
Sbjct:   13 IPDISVSKMDNFKSISVSAAEWIDIKECKEDNLPKWLNERKSEGYTIVGLEQTSSSICLSTLSFPEKTVLLLGKEKEGIPVELLQLVDECVEIPQLGIIRSLNVHVSGALAIWEYSKQMM 132

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: UPI001C70C9D2 (probable methyltransferase TARBP1 n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C70C9D2)

HSP 1 Score: 142 bits (357), Expect = 8.810e-37
Identity = 64/120 (53.33%), Postives = 91/120 (75.83%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            VPSLAVL+   F +LS+TA QW+P++EVKP++  +YLR  + +GY +VA EQT +S+ LS +SFP +T ++LG+E+ G+P  LL    VCV+IPQ G++RSLN HVSGA+ +WEY RQ +
Sbjct: 1471 VPSLAVLEDQTFNSLSLTAQQWVPVKEVKPDNLAEYLRTLQNEGYTLVAAEQTANSKKLSEYSFPERTAVILGNEREGIPCELLQLLNVCVEIPQFGIIRSLNVHVSGALFIWEYTRQHL 1590

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: A0A423TF84_PENVA (Putative methyltransferase TARBP1 n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A423TF84_PENVA)

HSP 1 Score: 141 bits (356), Expect = 1.050e-36
Identity = 64/120 (53.33%), Postives = 91/120 (75.83%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            VPSLAVL+   F +LS+TA QW+P++EVKP++  +YLR  + +GY +VA EQT +S+ LS +SFP +T ++LG+E+ G+P  LL    VCV+IPQ G++RSLN HVSGA+ +WEY RQ +
Sbjct:  663 VPSLAVLEDQTFNSLSLTAQQWVPVKEVKPDNIAEYLRTLQNEGYTLVAAEQTANSKKLSEYSFPERTAVILGNEREGIPCELLQLLDVCVEIPQFGIIRSLNVHVSGALFIWEYTRQHL 782

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: UPI000F67C326 (probable methyltransferase TARBP1 n=2 Tax=Penaeus TaxID=133894 RepID=UPI000F67C326)

HSP 1 Score: 141 bits (356), Expect = 1.200e-36
Identity = 64/120 (53.33%), Postives = 91/120 (75.83%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            VPSLAVL+   F +LS+TA QW+P++EVKP++  +YLR  + +GY +VA EQT +S+ LS +SFP +T ++LG+E+ G+P  LL    VCV+IPQ G++RSLN HVSGA+ +WEY RQ +
Sbjct: 1468 VPSLAVLEDQTFNSLSLTAQQWVPVKEVKPDNIAEYLRTLQNEGYTLVAAEQTANSKKLSEYSFPERTAVILGNEREGIPCELLQLLDVCVEIPQFGIIRSLNVHVSGALFIWEYTRQHL 1587

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: A0A0S7HMT4_9TELE (TARB1 n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7HMT4_9TELE)

HSP 1 Score: 131 bits (330), Expect = 4.020e-36
Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 0

Query:    3 SLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            SL  L    F +LS++A  WLP+ EVKP +   +L+  K +GYC+V +EQT +SQ L  F FP KTLLLLG+E+ G+PA LL    VCV+IPQ+G++RSLN HVS A+ +WEY RQ +
Sbjct:   85 SLHHLNDKHFQSLSVSAELWLPLLEVKPVELTHFLQVKKSEGYCIVGVEQTANSQKLQDFKFPEKTLLLLGNEREGIPANLLQMLDVCVEIPQQGIIRSLNVHVSAALLIWEYTRQHL 202

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: A0A8J5N618_HOMAM (Methyltransferase TARBP1-like 2 n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5N618_HOMAM)

HSP 1 Score: 135 bits (339), Expect = 4.400e-36
Identity = 62/120 (51.67%), Postives = 88/120 (73.33%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            VPSL++L+   F +LS TA QW+P++EVKP+    YLR  + +GY +VA EQT +S  LS +SFP +T+++LG+E+ G+P  LL    VCV+IPQ G++RSLN HVSGA+ +WEY RQ +
Sbjct:  226 VPSLSILEDPTFNSLSQTAQQWVPMKEVKPDCLAHYLRTLQNEGYTLVAAEQTANSIKLSEYSFPERTVVILGNEREGIPCELLQLLDVCVEIPQTGIIRSLNVHVSGALFIWEYTRQHL 345

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: A0A7L2CCD5_9PASS (TARB1 methyltransferase (Fragment) n=1 Tax=Alaudala cheleensis TaxID=670337 RepID=A0A7L2CCD5_9PASS)

HSP 1 Score: 129 bits (323), Expect = 5.920e-36
Identity = 61/120 (50.83%), Postives = 83/120 (69.17%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            V SL  +Q   F  LS++A QWLP+ EVKP    DYL+  K +GY ++ +EQT  S  L+ + FP K+LLLLG+E  G+PA L+    VCV+IPQ+G++ SLN HVSGA+ +WEY RQ+M
Sbjct:   16 VGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQEKKTEGYTIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIWSLNVHVSGALLIWEYTRQQM 135

[Close]

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Match: A0A7L2DUP6_ANTMN (TARB1 methyltransferase (Fragment) n=41 Tax=Aves TaxID=8782 RepID=A0A7L2DUP6_ANTMN)

HSP 1 Score: 130 bits (328), Expect = 9.210e-36
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0

Query:    1 VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVALEQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLRSLNAHVSGAIAMWEYCRQRM 120
            V SL  +Q   F  LS++A QWLP+ EVKP    DYL+  K +GY ++ +EQT  S  L+ + FP K+LLLLG+E  G+PA L+    VCV+IPQ+G++RSLN HVSGA+ +WEY RQ++
Sbjct:   93 VGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYTIIGVEQTAKSLDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQV 212

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|141336 vs. uniprot

BLAST of jgi.p|Trimin1|141336 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YWF6_9STRA	2.410e-81	100.00	Alpha/beta knot methyltransferase (Fragment) n=1 T...	[more]
UPI001FB743DB	1.950e-37	53.33	probable methyltransferase TARBP1 n=1 Tax=Penaeus ...	[more]
A0A7S2E9B0_TRICV	2.130e-37	50.00	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
UPI001C70C9D2	8.810e-37	53.33	probable methyltransferase TARBP1 n=1 Tax=Penaeus ...	[more]
A0A423TF84_PENVA	1.050e-36	53.33	Putative methyltransferase TARBP1 n=1 Tax=Penaeus ...	[more]
UPI000F67C326	1.200e-36	53.33	probable methyltransferase TARBP1 n=2 Tax=Penaeus ...	[more]
A0A0S7HMT4_9TELE	4.020e-36	52.54	TARB1 n=1 Tax=Poeciliopsis prolifica TaxID=188132 ...	[more]
A0A8J5N618_HOMAM	4.400e-36	51.67	Methyltransferase TARBP1-like 2 n=1 Tax=Homarus am...	[more]
A0A7L2CCD5_9PASS	5.920e-36	50.83	TARB1 methyltransferase (Fragment) n=1 Tax=Alaudal...	[more]
A0A7L2DUP6_ANTMN	9.210e-36	50.83	TARB1 methyltransferase (Fragment) n=41 Tax=Aves T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001537	tRNA/rRNA methyltransferase, SpoU type	PFAM	PF00588	SpoU_methylase	coord: 9..113 e-value: 1.6E-17 score: 64.0
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 2..120 e-value: 8.3E-30 score: 105.5
None	No IPR available	PIRSR	PIRSR029256-1	PIRSR029256-1	coord: 63..119 e-value: 2.5E-9 score: 34.8
IPR045330	Probable methyltransferase Trm3/TARBP1	PANTHER	PTHR12029	RNA METHYLTRANSFERASE	coord: 1..120
IPR044748	Trm3/ TARBP1, C-terminal	CDD	cd18091	SpoU-like_TRM3-like	coord: 1..115 e-value: 5.4132E-57 score: 171.559
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 11..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_33	contig	Contig_33:103653..106599 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|141336	mRNA_5895	Tribonema minus UTEX_B_3156	mRNA	Contig_33 103653..106599 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|141336|gw1.33.90.1 ID=Trimin1|141336|gw1.33.90.1|Name=jgi.p|Trimin1|141336|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=120bp
VPSLAVLQRNDFAALSMTAAQWLPIEEVKPEDTRDYLRAAKRDGYCVVAL
EQTPSSQCLSAFSFPAKTLLLLGDEKRGVPAPLLAEATVCVQIPQRGVLR
SLNAHVSGAIAMWEYCRQRM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001537	SpoU_MeTrfase
IPR029026	tRNA_m1G_MTases_N
IPR045330	Trm3/TARBP1
IPR044748	Trm3/TARBP1_C
IPR029028	Alpha/beta_knot_MTases