Trimin1|141136|gw1.60.119.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|141136
Unique NameTrimin1|141136|gw1.60.119.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length108
Homology
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: A0A835YN08_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN08_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.610e-66
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query:    1 KEPTLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108
            KEPTLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP
Sbjct:    1 KEPTLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA)

HSP 1 Score: 135 bits (339), Expect = 4.300e-36
Identity = 70/105 (66.67%), Postives = 87/105 (82.86%), Query Frame = 0
Query:    4 TLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108
            TLELLQS +N PL ++A+E  +SLT++K++CRK GIQRWPHRQIRS++K   EL ERI+  TS  E + LQ Q+ LLEKK+RLVTRGASSGLQSALRNALF+A+P
Sbjct:   15 TLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANP 119          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.200e-35
Identity = 67/105 (63.81%), Postives = 86/105 (81.90%), Query Frame = 0
Query:    4 TLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108
            TLELLQS +N PL ++A+E  +SLT++K++CRK GIQRWPHRQIRSL+K   EL+ER     +A E + ++ Q+ LLEKK+RLVTRGASSGLQSALRNALF+A+P
Sbjct:   12 TLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAEIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANP 116          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI)

HSP 1 Score: 130 bits (326), Expect = 2.400e-34
Identity = 64/108 (59.26%), Postives = 89/108 (82.41%), Query Frame = 0
Query:    1 KEPTLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108
            +E TLELLQS +N PL ++A+E  +SLT++K++CRK GIQRWPHRQIRS++K + +L ERI++  S  E + L+ Q+ LLEKKRRLVT+GASSGL +A+RNA+F+A+P
Sbjct:   12 EEITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSVNSPDEHAELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANP 119          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 5.860e-21
Identity = 50/105 (47.62%), Postives = 75/105 (71.43%), Query Frame = 0
Query:    4 TLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108
            TL +L++ +  PL   AR   VS TM+K+LCR+ GIQRWPHRQIRS++K + +  +  +  TSA +++   E++ALL+KKR +V + AS GL ++LR+A+FMA P
Sbjct:  101 TLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARP 205          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: A0A6H5JS66_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS66_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 7.330e-20
Identity = 48/104 (46.15%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    4 TLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMAD 107
            T+E+LQ  F+ PLV VA E  VSLTM+KRLCRKLG+ RWP RQI S++K + +L +++    +  + +   + +   EKK++L+TRGA++G+   +RNAL++AD
Sbjct:   32 TIEVLQQHFHQPLVVVADELGVSLTMIKRLCRKLGMPRWPFRQIDSINKAMEDLHDQLEGARTEADRARYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLAD 135          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: D8LTZ5_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ5_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.350e-19
Identity = 47/104 (45.19%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    4 TLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMAD 107
            T+E+LQ  F+ PL+ VA E  VSLTM+KRLCRKLG+ RWP RQI S++K + +L +++    +  + +   + +   EKK++L+TRGA++G+   +RNAL++AD
Sbjct:   32 TIEVLQQHFHQPLMAVADELGVSLTMIKRLCRKLGMPRWPFRQIDSINKAMEDLHDQLEGARTEADRARYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLAD 135          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: A0A7S3UTA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTA5_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 1.390e-16
Identity = 42/104 (40.38%), Postives = 71/104 (68.27%), Query Frame = 0
Query:    5 LELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELE-ERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMAD 107
            ++LL+++F+ PL + A    +S+T +K++CRK  I+RWPHRQ+RSL+  + ELE ++     +  +++ L  ++ LLEKKR +V + AS GL+   RNA+F A+
Sbjct:   31 IDLLENKFDLPLSEAASSLGLSMTKLKKICRKFNIKRWPHRQVRSLENEIEELEMKKRRPNVTCAKIAKLNRRIELLEKKRLIVVKAASFGLEPKERNAIFCAN 134          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: A0A425CIF9_9STRA (RWP-RK domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CIF9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.620e-16
Identity = 41/87 (47.13%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    1 KEPTLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLV 87
            +E TLE L+  F+ P+V+VAREF +  T +K++CR+ GI+RWPHRQIRSL++ +  LE+  SATT+  E +  + Q+  L+ K+R V
Sbjct:   86 RELTLEKLRPHFDRPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIQMLEQVESATTNPEEKARYKTQIEELKDKQRAV 172          
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Match: M4BJE9_HYAAE (RWP-RK domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJE9_HYAAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.410e-15
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    1 KEPTLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISATTSARELSYLQEQVALLEKKRRLV 87
            +E TLE L+  F  P+V+VAREF +  T +K+LCR+ GI+RWPHRQIRSL++ +  LE+  SATTS  E +    Q+  L+ K+R V
Sbjct:   83 RELTLEELRPHFGQPIVEVAREFGICTTFLKKLCRQCGIKRWPHRQIRSLNRTIQMLEQVESATTSPEEKATYAAQIKELKDKQRAV 169          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|141136 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YN08_9STRA3.610e-66100.00RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
A0A835Z1M5_9STRA4.300e-3666.67Putative NIN-like transcription factor n=1 Tax=Tri... [more]
A0A835YTG3_9STRA5.200e-3563.81Putative NIN-like transcription factor n=1 Tax=Tri... [more]
H6WBB7_VAULI2.400e-3459.26Putative NIN-like transcription factor n=1 Tax=Vau... [more]
A0A836CMG7_9STRA5.860e-2147.62RWP-RK domain-containing protein n=1 Tax=Tribonema... [more]
A0A6H5JS66_9PHAE7.330e-2046.15RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LTZ5_ECTSI1.350e-1945.19Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A7S3UTA5_HETAK1.390e-1640.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A425CIF9_9STRA2.620e-1647.13RWP-RK domain-containing protein n=1 Tax=Peronospo... [more]
M4BJE9_HYAAE1.410e-1549.43RWP-RK domain-containing protein n=1 Tax=Hyalopero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 4..50
e-value: 4.3E-18
score: 65.0
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 1..70
score: 16.881336
IPR044607Transcription factor RKD-likePANTHERPTHR46373PROTEIN RKD4coord: 4..87
NoneNo IPR availablePANTHERPTHR46373:SF2PROTEIN RKD4coord: 4..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_60contigContig_60:474261..474584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|141136mRNA_6812Tribonema minus UTEX_B_3156 mRNAContig_60 474261..474584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|141136|gw1.60.119.1 ID=Trimin1|141136|gw1.60.119.1|Name=jgi.p|Trimin1|141136|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=108bp
KEPTLELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSL
DKLLFELEERISATTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALR
NALFMADP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
IPR044607RKD-like