Trimin1|140939|gw1.33.87.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|140939
Unique NameTrimin1|140939|gw1.33.87.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length71
Homology
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: A0A835Z336_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z336_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.420e-46
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR
Sbjct:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: A0A482RNG8_9ARCH (PAS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNG8_9ARCH)

HSP 1 Score: 120 bits (300), Expect = 2.380e-32
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            MVYVNQ FCK TGY K EA GRNC+FLQGP+TEPEAI +IR+ LS+GQDCHV++TNYRKNG+ F NLLSM+
Sbjct:   43 MVYVNQEFCKTTGYGKEEAIGRNCRFLQGPDTEPEAIQVIRNTLSKGQDCHVKLTNYRKNGEMFQNLLSMK 113          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: A0A835YJF7_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJF7_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.350e-30
Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            M++VN AFCKVTGY+K E  GRNC+FLQGP+TEPEAI +IRS LS+GQDCHV++TNYRKNG+KF NLLSM+
Sbjct:  267 MIFVNDAFCKVTGYSKEETVGRNCRFLQGPDTEPEAIALIRSTLSQGQDCHVKLTNYRKNGEKFQNLLSMK 337          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: A0A835Z4M9_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4M9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.580e-30
Identity = 53/71 (74.65%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            MVYVN AFCKVTGY++ E+ GRNC+FLQGP+TEPEAI+MIR RL +G DCHV+ITNYRKNG++F NLLSM+
Sbjct:  363 MVYVNAAFCKVTGYSREESVGRNCRFLQGPDTEPEAIEMIRQRLGKGLDCHVKITNYRKNGERFQNLLSMK 433          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: F0YGV8_AURAN (PAS domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGV8_AURAN)

HSP 1 Score: 109 bits (272), Expect = 2.880e-29
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            MVYVN  FC+VT Y + EA GRNC+FLQGP+TEPE+I +I+  L +G+DCHV +TNYRK+GDKF NLLSMR
Sbjct:   36 MVYVNPEFCRVTEYPREEAVGRNCRFLQGPDTEPESIQVIQETLCKGEDCHVLLTNYRKSGDKFKNLLSMR 106          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: A0A835YT73_9STRA (PAS/PAC sensor hybrid histidine kinase putative blue light receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT73_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.690e-29
Identity = 52/71 (73.24%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            MVY+N  F KVTGY K EA GRNC+FLQGP+TEPE+I +IR+ LS+GQDCHV++TNYRKNGDKF NLLSM+
Sbjct:  977 MVYINSEFTKVTGYTKEEAVGRNCRFLQGPDTEPESIAVIRNTLSKGQDCHVKLTNYRKNGDKFQNLLSMK 1047          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: A0A126WYE1_SCYLO (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126WYE1_SCYLO)

HSP 1 Score: 115 bits (287), Expect = 3.220e-28
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            MVY+N  F K TGY K EA GRNC+FLQGPETEPE+I +IR+ LS+GQDCHV++TNYRKNG+KF NLLSM+
Sbjct:  239 MVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMK 309          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: A0A126X2E1_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E1_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.250e-28
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            MVY+N  F K TGY K EA GRNC+FLQGPETEPE+I +IR+ LS+GQDCHV++TNYRKNG+KF NLLSM+
Sbjct:  656 MVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMK 726          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: D7FQX8_ECTSI (Helmchrome putative blue light receptor for phototaxis n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQX8_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 3.260e-28
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            MVY+N  F K TGY K EA GRNC+FLQGPETEPE+I +IR+ LS+GQDCHV++TNYRKNG+KF NLLSM+
Sbjct:  974 MVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMK 1044          
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Match: A0A7S4IDC3_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IDC3_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 8.700e-28
Identity = 46/71 (64.79%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDCHVRITNYRKNGDKFTNLLSMR 71
            M +VNQ FCK TGY K E +GRNC+FLQGP+TEP+++ +I+  L RG DCHV++TNYRKNGD F NLL+MR
Sbjct:   45 MFFVNQEFCKTTGYPKHEVQGRNCRFLQGPKTEPQSVAVIQDTLRRGVDCHVKLTNYRKNGDLFENLLTMR 115          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|140939 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z336_9STRA1.420e-46100.00PAS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A482RNG8_9ARCH2.380e-3274.65PAS domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A835YJF7_9STRA1.350e-3074.65PAS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z4M9_9STRA1.580e-3074.65PAS domain-containing protein n=1 Tax=Tribonema mi... [more]
F0YGV8_AURAN2.880e-2967.61PAS domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A835YT73_9STRA3.690e-2973.24PAS/PAC sensor hybrid histidine kinase putative bl... [more]
A0A126WYE1_SCYLO3.220e-2871.83Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A126X2E1_9PHAE3.250e-2871.83Putative LOV domain-containing protein n=2 Tax=Scy... [more]
D7FQX8_ECTSI3.260e-2871.83Helmchrome putative blue light receptor for photot... [more]
A0A7S4IDC3_9EUKA8.700e-2864.79Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainPFAMPF13426PAS_9coord: 2..70
e-value: 6.3E-12
score: 45.7
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 1..68
e-value: 1.9E-9
score: 35.7
IPR000014PAS domainPROSITEPS50112PAScoord: 1..47
score: 10.618465
IPR000014PAS domainCDDcd00130PAScoord: 1..71
e-value: 2.31682E-8
score: 44.5463
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 1..71
e-value: 2.2E-28
score: 101.0
NoneNo IPR availablePANTHERPTHR47429PROTEIN TWIN LOV 1coord: 1..70
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 2..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:127265..127897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|140939mRNA_5900Tribonema minus UTEX_B_3156 mRNAContig_33 127265..127897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|140939|gw1.33.87.1 ID=Trimin1|140939|gw1.33.87.1|Name=jgi.p|Trimin1|140939|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=71bp
MVYVNQAFCKVTGYAKGEAEGRNCKFLQGPETEPEAIDMIRSRLSRGQDC
HVRITNYRKNGDKFTNLLSMR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf