Trimin1|140648|gw1.122.63.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|140648
Unique NameTrimin1|140648|gw1.122.63.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length64
Homology
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: A0A835ZD57_9STRA (ZnF_CDGSH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD57_9STRA)

HSP 1 Score: 139 bits (349), Expect = 6.660e-42
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
Query:    1 GRINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            GRINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK
Sbjct:    1 GRINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: B8CEB8_THAPS (ZnF_CDGSH domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEB8_THAPS)

HSP 1 Score: 96.7 bits (239), Expect = 4.340e-25
Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    2 RINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            RIN++I +DSPKVA   ++  GEKKV CRCWKSETFP+C+ AH +HN+ TGDNVGP+ VSV+K
Sbjct:    3 RINNKIDLDSPKVATMDKICDGEKKVYCRCWKSETFPLCDAAHVAHNKETGDNVGPLIVSVEK 65          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: A0A835ZBW8_9STRA (CDGSH iron sulfur domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW8_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.840e-24
Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    2 RINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            RIN++I ++SPKVA    L AG KKV CRCWKS TFP+CNGAH  HN+  GDNVGP+ VSV+K
Sbjct:   34 RINNKIDLESPKVATMETLPAGGKKVYCRCWKSATFPLCNGAHVKHNEEVGDNVGPLIVSVEK 96          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: A0A813IN66_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IN66_POLGL)

HSP 1 Score: 95.9 bits (237), Expect = 1.840e-23
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    2 RINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            +IN +I+ +SPKV    +L AG+KKV CRCW S+TFP+CNGAH  HN  TGDNVGP+ VSVKK
Sbjct:  117 KINKKIEPESPKVVTKEDLDAGDKKVYCRCWLSDTFPLCNGAHAKHNGQTGDNVGPLIVSVKK 179          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: A0A7S3HKP5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKP5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.490e-23
Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    2 RINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            +IN++I +DS KV    +L AG+KKV CRCW S+TFP+CNGAH  HN+ TGDNVGP+ V+V+K
Sbjct:   76 KINNKIDLDSAKVVTQDKLKAGDKKVYCRCWLSDTFPLCNGAHAKHNEATGDNVGPLIVAVEK 138          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: A0A7S2UEE3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEE3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 7.250e-23
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    2 RINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            RIN+++ +DSPKVA   +L  G KKV CRCW+S TFP+C+G+H  HN+ TGDNVGP+ VSV K
Sbjct:   35 RINTQVDLDSPKVATMEKLEPGTKKVYCRCWQSGTFPLCDGSHMKHNEATGDNVGPLIVSVPK 97          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: L1J777_GUITC (ZnF_CDGSH domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J777_GUITC)

HSP 1 Score: 90.9 bits (224), Expect = 8.450e-23
Identity = 38/64 (59.38%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    1 GRINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            G+IN +I++D+PKVA +  +  G+K V CRCWKS TFP C+GAH  HNQ TGDNVGP+ V+V K
Sbjct:    3 GKINHKIELDNPKVATTDTIEPGQKVVYCRCWKSATFPKCDGAHNKHNQETGDNVGPLIVNVPK 66          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: A0A812JQ04_9DINO (Cisd1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JQ04_9DINO)

HSP 1 Score: 92.0 bits (227), Expect = 1.440e-22
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 GRINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            G+IN++I  + PKV    +L AG+KKV CRCW S TFP+C+G H  HN+ TGDNVGP+ VSVKK
Sbjct:   59 GKINNKIDPEVPKVVTKEDLKAGDKKVYCRCWLSGTFPLCDGTHAKHNEATGDNVGPLIVSVKK 122          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: A0A8J6CAC4_DIALT (ZnF_CDGSH domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CAC4_DIALT)

HSP 1 Score: 90.9 bits (224), Expect = 2.260e-22
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    2 RINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            RIN++I +DSPKV + +EL    K V CRCWKS TFP+CNGAH  HN+ TGDNVGP+ V+ KK
Sbjct:   41 RINTQIDLDSPKVVNMLELEG--KAVYCRCWKSATFPLCNGAHAKHNEATGDNVGPLIVTAKK 101          
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Match: A0A7S2I006_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I006_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.010e-22
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 GRINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQLTGDNVGPISVSVKK 64
            G+IN    +DSPKV    +L AG+KKV CRCW+S TFP+C+G+H  HN+ TGDNVGP+ VSV K
Sbjct:   58 GKINFEKDLDSPKVVTQEKLEAGDKKVYCRCWQSGTFPLCDGSHVKHNEETGDNVGPLIVSVAK 121          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|140648 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZD57_9STRA6.660e-42100.00ZnF_CDGSH domain-containing protein (Fragment) n=1... [more]
B8CEB8_THAPS4.340e-2565.08ZnF_CDGSH domain-containing protein (Fragment) n=1... [more]
A0A835ZBW8_9STRA2.840e-2465.08CDGSH iron sulfur domain-containing protein n=1 Ta... [more]
A0A813IN66_POLGL1.840e-2363.49Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S3HKP5_9STRA5.490e-2360.32Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2UEE3_9STRA7.250e-2360.32Hypothetical protein n=1 Tax=Attheya septentrional... [more]
L1J777_GUITC8.450e-2359.38ZnF_CDGSH domain-containing protein n=2 Tax=Guilla... [more]
A0A812JQ04_9DINO1.440e-2259.38Cisd1 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A8J6CAC4_DIALT2.260e-2261.90ZnF_CDGSH domain-containing protein n=1 Tax=Diacro... [more]
A0A7S2I006_9STRA4.010e-2259.38Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018967Iron-binding zinc finger, CDGSH typeSMARTSM00704znf_cdgshcoord: 13..50
e-value: 6.0E-8
score: 42.4
IPR018967Iron-binding zinc finger, CDGSH typePFAMPF09360zf-CDGSHcoord: 26..44
e-value: 1.8E-7
score: 31.3
IPR042216MitoNEET, CDGSH iron-sulfur domainGENE3D3.40.5.90coord: 18..64
e-value: 1.8E-18
score: 67.9
IPR045131CDGSH iron-sulfur domain-containing protein 1/2PANTHERPTHR13680CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1coord: 2..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_122contigContig_122:121009..121688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|140648mRNA_13912Tribonema minus UTEX_B_3156 mRNAContig_122 121009..121688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|140648|gw1.122.63.1 ID=Trimin1|140648|gw1.122.63.1|Name=jgi.p|Trimin1|140648|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=64bp
GRINSRIQMDSPKVADSMELGAGEKKVLCRCWKSETFPICNGAHTSHNQL
TGDNVGPISVSVKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018967FeS-contain_CDGSH-typ
IPR042216MitoNEET_CISD
IPR045131CISD1/2