Trimin1|138918|gw1.34.20.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|138918
Unique NameTrimin1|138918|gw1.34.20.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length231
Homology
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A836CFL8_9STRA (Fcf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL8_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 6.450e-140
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEETAIVEQLRQEERQXXXXXXXXXXXXXXXXXPTAPNPLSCLPKKNAKAKQQDKPKRKRK 231
            MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEETAIVEQLRQEERQXXXXXXXXXXXXXXXXXPTAPNPLSCLPKKNAKAKQQDKPKRKRK
Sbjct:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEETAIVEQLRQEERQXXXXXXXXXXXXXXXXXPTAPNPLSCLPKKNAKAKQQDKPKRKRK 231          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A6H5KVJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ1_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 5.940e-55
Identity = 104/200 (52.00%), Postives = 137/200 (68.50%), Query Frame = 0
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTI----TEHAPG-----------------KG-SPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKT-GVTEEETAIV 177
            MR+TRAKQYRR LRFFRIVYG+ APYKV+LDGNFIH C++ KV++ +R+ +VLQG K  L VP++A +EL+ALG +FQ A  FA   C+ +     E+  G                 KG  PA++I A I +DN  +Y+VASQDE LR +LR V GCPL+++S+TVL+MEQ SGK+KA FE  ER+K  G TEEE  ++
Sbjct:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSKVDIEKRLTSVLQGAKMHLFVPRSAREELKALGPEFQKAYNFAIGHCRGLPPPRNENQAGGAXXXXXXXXXXXXXGEKGPDPAKEIIAAIGADNEGKYLVASQDENLRMRLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKKAVGTTEEEDRVL 200          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A7S2B5Q5_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5Q5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 8.600e-36
Identity = 81/219 (36.99%), Postives = 119/219 (54.34%), Query Frame = 0
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEET---AIVEQLRQEERQXXXXXXXXXXXXXXXXXPTAPNPLSCLPKK 216
            MR+ R K+ R+ L FFR+ +G+  PY+VLLDGNFIH C ++K+++  R+   L GEK+ L VP   I EL  LG   + A  FA  +C+ +        S +  I  LI   N   Y+VASQDE+LR +LR + G PL+++ +TVL++E     +K A   +E +K  V  +E+    +V Q+R+E +                    A NPLSC  KK
Sbjct:    1 MRLLRGKKARKTLAFFRLNFGISPPYRVLLDGNFIHECTSYKIDILARLGKQLGGEKFMLYVPSCVISELEMLGTNMKPALTFALENCEVVA--CDSAESCSAGILGLIGEKNAEGYLVASQDEDLRCELRAIPGVPLMFIKRTVLILESTGHASKTATVQMETKKVAVVGDESKAMGLVRQIREEAKSAQRLRVEGHSQRPKKRAKGA-NPLSCKKKK 216          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A7S2B6T0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6T0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.040e-27
Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 0
Query:   20 YGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEET---AIVEQLRQE 183
            + V   Y+VLLDGNFIH C ++K+++  R+   L GEK+ L VP   I EL  LG   + A  FA  +C+ +        S +  I  LI   N   Y+VASQDE+LR +LR + G PL+++ +TVL++E     +K A   +E +K  V  +E+    +V Q+R+E
Sbjct:    7 HRVACSYRVLLDGNFIHECTSYKIDILARLGKQLGGEKFMLYVPSCVISELEMLGTNMKPALTFALENCEVVA--CDSAESCSAGILGLIGEKNAEGYLVASQDEDLRCELRAIPGVPLMFIKRTVLILESTGHASKTATVQMETKKVAVVGDESKAMGLVRQIREE 171          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A7S1C1L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1L6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 7.880e-26
Identity = 68/162 (41.98%), Postives = 96/162 (59.26%), Query Frame = 0
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQG--EKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFE 160
            MRI R KQ+R+ LRF+R++Y V  P+KVLLDGNFIH  L    E+   + ++LQ   +  +L V    ++ELR+LG +F    A A         H     S AE I +LI + N   + VASQD  LR++LR VAG P++ LS++VL++EQ S  +K   E
Sbjct:   37 MRILRQKQHRKILRFYRMMYNVSPPFKVLLDGNFIHIGLRTSAEIKRLLPSLLQERPDVVRLFVTPCILNELRSLGAEFGDTLAEARTFRVARCGHGDDPVSAAECIASLIGTKNKEHFFVASQDGLLRSRLRAVAGTPIILLSQSVLVLEQPSDASKGLVE 198          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: W7T2Y0_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 9.160e-26
Identity = 69/186 (37.10%), Postives = 106/186 (56.99%), Query Frame = 0
Query:   10 RRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTI------TEHAP-GKG--SPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGV-TEEETAIVEQLRQEER 185
            R+ LRF+RIVYG+  PYK+L+DGNFIH  L  K+++ +R++ +L  E      P+  +DEL A+G  F+AA  +    C  +      T H   GK   S    I  ++   N  +Y+VA+QD+EL+A+LR+V    LL++S+ V LME  S  ++      E  K  + TEEE  ++  LR +E+
Sbjct:    2 RKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEK 187          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A4P9X7C9_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X7C9_9FUNG)

HSP 1 Score: 106 bits (264), Expect = 3.220e-25
Identity = 65/167 (38.92%), Postives = 90/167 (53.89%), Query Frame = 0
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKF----QAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALE 163
            MR  R K Y+R LR + + +  +APY++LLDGNFIH  +  KV + E ++  +  E  + +V    ++EL+ALG+ F     AA  F  R C       P     A  IE  I   N   Y VASQD ELR ++R+V G PL +  +TVL+ME  S +T  A  A E
Sbjct:    1 MRSKREKSYKRALRLYNVAFKFRAPYQILLDGNFIHQAVKQKVRIQEALKDTVSAE-VRPMVTSCVLNELQALGKPFVAAYTAAKCFEVRGCLHQRHPVPA----ARCIETTIGPVNTFHYCVASQDNELRKRMRDVVGTPLFHFKRTVLIMEPVSRQTLTAAGAKE 162          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A3M6VBL2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBL2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 6.370e-25
Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYK--LLVPKTAIDELRALG----EKFQAAAAFATRSCQTITEHAPGKG-SPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKA 157
            MR  RAK  R+ LR F  + G++APYKVLLDGNFI  CL  KV++ ER+   LQ + Y+    VP+ A++EL+ LG    E ++ A +F        +E    K    ++ I+ +I   N  +++V +Q+ ELR  LR V G PL+YL+++VL+ E+ S  T A
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGLKAPYKVLLDGNFIAMCLQMKVDVQERVPKYLQVKPYECEFYVPRAALEELQLLGKTMKEAYELAKSFKVAESYDQSEKEEDKPVDVSKAIQIIIGDTNDRKFVVCTQEVELRKALRLVPGVPLMYLNRSVLVFEEISHATLA 164          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A024T8F2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8F2_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.350e-25
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 0
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPA-EQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKT 155
            MR  RAK  R+ LR F+ + G++ PYKVLLDGNFI  C+   V++  R+   LQ       V +  +DEL+ L +     AA+   S   + E  P   + A   + A I S N  ++IVA+Q+ ELR++LR V G PL+YL+++VL+ E  S  T
Sbjct:    1 MRYLRAKHIRKALRQFQFLCGIKPPYKVLLDGNFIAMCIKMHVDIAVRLPTFLQTNNCTYFVTRAVLDELKLLSDNADMRAAWEAASSFEVVEGDPDATNDATNSMLAAIGSRNDRKFIVATQETELRSQLRRVPGVPLIYLNRSVLVFEDMSEAT 156          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A225W858_9STRA (rRNA-processing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W858_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.540e-25
Identity = 64/162 (39.51%), Postives = 95/162 (58.64%), Query Frame = 0
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYK--LLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQ---IEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKA 157
            MR  RAK  R+ LR F  + G++ PYKVLLDGNFI  C+  KV++ ER+   LQ + ++    VP+ A++EL+ LGE  + A   A +S +    H   K    +    I+ +I   N  +++V +Q+ ELR  LR V G PLLYL+++VL+ E+ S  T A
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCMQMKVDVHERVPKYLQVKPHECEFYVPRAALEELKMLGEAMKEAYELA-KSFKVAETHNQPKNEAMDVSKCIQTIIGDKNDGKFVVCTQEVELRKALRQVPGVPLLYLNRSVLVFEEISRATLA 161          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFL8_9STRA6.450e-140100.00Fcf1-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5KVJ1_9PHAE5.940e-5552.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2B5Q5_9STRA8.600e-3636.99Hypothetical protein n=3 Tax=Dictyocha speculum Ta... [more]
A0A7S2B6T0_9STRA1.040e-2737.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1C1L6_9STRA7.880e-2641.98Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
W7T2Y0_9STRA9.160e-2637.10Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
A0A4P9X7C9_9FUNG3.220e-2538.92Uncharacterized protein (Fragment) n=1 Tax=Cauloch... [more]
A0A3M6VBL2_9STRA6.370e-2539.63Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A024T8F2_9STRA8.350e-2539.10Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A225W858_9STRA8.540e-2539.51rRNA-processing protein n=1 Tax=Phytophthora megak... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006984rRNA-processing protein Fcf1/Utp23PFAMPF04900Fcf1coord: 56..150
e-value: 9.1E-16
score: 58.0
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..158
e-value: 2.3E-41
score: 143.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..231
NoneNo IPR availablePANTHERPTHR12416UNCHARACTERIZEDcoord: 1..230
NoneNo IPR availablePANTHERPTHR12416:SF3RRNA-PROCESSING PROTEIN UTP23 HOMOLOGcoord: 1..230
NoneNo IPR availableCDDcd08553PIN_Fcf1-likecoord: 26..149
e-value: 7.39409E-43
score: 139.253
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 25..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_34contigContig_34:179863..181781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138918mRNA_8254Tribonema minus UTEX_B_3156 mRNAContig_34 179863..181781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|138918|gw1.34.20.1 ID=Trimin1|138918|gw1.34.20.1|Name=jgi.p|Trimin1|138918|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=231bp
MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQ
AVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGS
PAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQ
ASGKTKAAFEALERRKTGVTEEETAIVEQLRQEERQKRAAEAAAKPAKRI
KRAPTAPNPLSCLPKKNAKAKQQDKPKRKRK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006984Fcf1/Utp23
IPR029060PIN-like_dom_sf