Trimin1|137795|gw1.217.30.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|137795
Unique NameTrimin1|137795|gw1.217.30.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length128
Homology
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A835Z3C1_9STRA (DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C1_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.580e-92
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLAWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLAWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW
Sbjct:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLAWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A6H5KLY6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLY6_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.200e-40
Identity = 68/129 (52.71%), Postives = 94/129 (72.87%), Query Frame = 0
Query:    2 PLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYL--AWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            P SPFGL+EELL  DPW+LL+ CIMLNQT+R Q+DPVL +FL+  PT + AA A    +  ++ PLGL ++RP+A++RFS+EYL  AW + + L+WVG+Y  DA+ IF+ +KW  V PDD  L  +V+W
Sbjct:  237 PPSPFGLIEELLTDDPWKLLIGCIMLNQTTRSQMDPVLVRFLEKFPTADVAAAASVDEMTRVVAPLGLQERRPIAIIRFSQEYLSKAWTNVKELYWVGKYAADAHKIFIERKWREVQPDDHALNWWVEW 365          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: D8U3A4_VOLCA (ENDO3c domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U3A4_VOLCA)

HSP 1 Score: 127 bits (319), Expect = 2.490e-35
Identity = 64/130 (49.23%), Postives = 86/130 (66.15%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLA--WRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PP SP+GL+EE+L+ +PWRLL+ACI+LN+T+ RQV  VL     ++PTPE+ A ADP  +  +L+PLGL  +R   +VRFS E+L+  W     L+ VG+Y  DAY IF   +W  V P D  LR Y DW
Sbjct:    3 PPASPWGLIEEVLYDNPWRLLVACILLNKTTGRQVRQVLGPLWRSYPTPEAMAAADPRVVEDILRPLGLQVRRAERLVRFSEEFLSRQWTCPTQLYGVGRYAADAYLIFCKGRWREVQPADKDLRRYRDW 132          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A7L2CZ00_CATFU (MBD4 protein (Fragment) n=6 Tax=Passeriformes TaxID=9126 RepID=A0A7L2CZ00_CATFU)

HSP 1 Score: 126 bits (317), Expect = 2.070e-34
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYL--AWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PP SPF L++E L++DPW+LL+A I LN+TS +   PVL +FL  +PTPE A  AD   ++ +LKPLGL + R   ++RFS EYL  AWR    LH +G+YG D+Y IF + +W+ V P D  L  Y  W
Sbjct:   42 PPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLRKYPTPEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHTW 171          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A3P8X5V0_CYNSE (Methyl-CpG binding domain protein 4 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8X5V0_CYNSE)

HSP 1 Score: 127 bits (318), Expect = 2.160e-34
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLA--WRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PP SPF L++E L++DPW+LL+A I LN+TS R   PVL QF + +P+ E    AD T ++ +LKPLGL + R   ++RFS EYL   WR    LH +G+YG D+Y IF + +W  VTPDD +L  Y  W
Sbjct:   56 PPRSPFNLVQETLFHDPWKLLVATIFLNKTSGRMAVPVLWQFFEQYPSAEETRAADWTTVSELLKPLGLFELRAKTLIRFSDEYLTKQWRYPVELHGIGKYGNDSYRIFCVGEWREVTPDDHMLNKYHSW 185          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A2V0NQ19_9CHLO (ENDO3c domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NQ19_9CHLO)

HSP 1 Score: 134 bits (336), Expect = 4.630e-34
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLA--WRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PP+SP+GL+EE L+ DPWRLL+AC++LN+TS +QV  V+ +  D  PTP++AA AD  A+  +++PLGL  KR  AV+RFS EYL   W     LH +G+Y  DAY +F   +W  V PDD  L+ Y DW
Sbjct:  350 PPVSPYGLIEEELFGDPWRLLLACMLLNKTSGKQVRQVIWRLFDMCPTPQAAAAADEVAVRELIRPLGLFNKRAAAVLRFSGEYLEKQWTCPTQLHGIGKYAADAYYMFCRGRWREVEPDDKDLKRYRDW 479          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A7K4VBA8_9EMBE (MBD4 protein (Fragment) n=49 Tax=Neognathae TaxID=8825 RepID=A0A7K4VBA8_9EMBE)

HSP 1 Score: 125 bits (314), Expect = 5.890e-34
Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYL--AWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PP SPF L++E L++DPW+LL+A I LN+TS +   PVL +FL  +P+PE A  AD   ++ +LKPLGL + R   ++RFS EYL  AWR    LH +G+YG D+Y IF + +W+ V P D  L  Y  W
Sbjct:   42 PPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHTW 171          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A851R966_TYCCO (MBD4 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A851R966_TYCCO)

HSP 1 Score: 125 bits (314), Expect = 5.890e-34
Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYL--AWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PP SPF L++E L++DPW+LL+A I LN+TS +   PVL +FL  +P+PE A  AD   ++ +LKPLGL + R   ++RFS EYL  AWR    LH +G+YG D+Y IF + +W+ V P D  L  Y  W
Sbjct:   42 PPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHTW 171          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A7K7CUY1_PHEME (MBD4 protein (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7K7CUY1_PHEME)

HSP 1 Score: 125 bits (314), Expect = 5.890e-34
Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYL--AWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PP SPF L++E L++DPW+LL+A I LN+TS +   PVL +FL  +P+PE A  AD   ++ +LKPLGL + R   ++RFS EYL  AWR    LH +G+YG D+Y IF + +W+ V P D  L  Y  W
Sbjct:   42 PPRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHTW 171          
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Match: A0A091GSD2_BUCRH (Methyl-CpG-binding domain protein 4 (Fragment) n=2 Tax=Buceros rhinoceros silvestris TaxID=175836 RepID=A0A091GSD2_BUCRH)

HSP 1 Score: 125 bits (313), Expect = 7.670e-34
Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 0
Query:    1 PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLA--WRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
            PP SPF L++E L++DPW+LL+A I LN+TS +   PVL QFL  +P+PE+A  AD   +A +L+PLGL + R   ++RFS EYL+  WR    LH +G+YG D+Y IF + +W  V P D  L  Y  W
Sbjct:   40 PPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVLWQFLRKYPSPETARAADWREMARLLRPLGLYELRAKTIIRFSDEYLSKRWRYPIELHGIGKYGNDSYRIFCVNEWREVQPQDHKLNVYHTW 169          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|137795 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z3C1_9STRA1.580e-92100.00DNA glycosylase (Fragment) n=1 Tax=Tribonema minus... [more]
A0A6H5KLY6_9PHAE1.200e-4052.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8U3A4_VOLCA2.490e-3549.23ENDO3c domain-containing protein (Fragment) n=1 Ta... [more]
A0A7L2CZ00_CATFU2.070e-3448.46MBD4 protein (Fragment) n=6 Tax=Passeriformes TaxI... [more]
A0A3P8X5V0_CYNSE2.160e-3448.46Methyl-CpG binding domain protein 4 n=1 Tax=Cynogl... [more]
A0A2V0NQ19_9CHLO4.630e-3450.00ENDO3c domain-containing protein n=1 Tax=Raphidoce... [more]
A0A7K4VBA8_9EMBE5.890e-3447.69MBD4 protein (Fragment) n=49 Tax=Neognathae TaxID=... [more]
A0A851R966_TYCCO5.890e-3447.69MBD4 protein (Fragment) n=2 Tax=Neognathae TaxID=8... [more]
A0A7K7CUY1_PHEME5.890e-3447.69MBD4 protein (Fragment) n=2 Tax=Passeriformes TaxI... [more]
A0A091GSD2_BUCRH7.670e-3447.69Methyl-CpG-binding domain protein 4 (Fragment) n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.30Hypothetical protein; domain 2coord: 1..128
e-value: 1.7E-38
score: 133.5
NoneNo IPR availablePANTHERPTHR15074:SF0METHYL-CPG-BINDING DOMAIN PROTEIN 4-RELATEDcoord: 1..128
IPR045138Methyl-CpG binding protein MeCP2/MBD4PANTHERPTHR15074METHYL-CPG-BINDING PROTEINcoord: 1..128
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 5..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_217contigContig_217:30648..32386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|137795mRNA_17603Tribonema minus UTEX_B_3156 mRNAContig_217 30648..32386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|137795|gw1.217.30.1 ID=Trimin1|137795|gw1.217.30.1|Name=jgi.p|Trimin1|137795|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=128bp
PPLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPE
SAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLAWRSGRALHWVGQYG
VDAYDIFVLQKWETVTPDDSVLRCYVDW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045138MeCP2/MBD4
IPR011257DNA_glycosylase