Trimin1|137719|gw1.23.111.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|137719
Unique NameTrimin1|137719|gw1.23.111.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length54
Homology
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 115 bits (288), Expect = 6.910e-33
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 109 bits (273), Expect = 8.620e-29
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            YRGVCVTREGKWRAVIYKERKQLYLGVFESE+DAAKAHDRAAR HFG QAMVNF
Sbjct:   31 YRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.510e-24
Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            YRGVCVTREGKWRAVIYKERKQLYLGV+ESEVDAAKAHDRAAR HF D A+ NF
Sbjct:  107 YRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF 160          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.140e-23
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            YRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR HF D++M NF
Sbjct:  143 YRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 196          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.140e-23
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            YRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR HF D++M NF
Sbjct:  130 YRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 183          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 81.3 bits (199), Expect = 3.000e-17
Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            ++GVCVTR GKWR+VIY  RKQLYLGVFE+E +AAKA+D +A ++FGD A++NF
Sbjct:  152 FKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 81.3 bits (199), Expect = 3.580e-17
Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            ++GVCVTR GKWR+VIY  RKQLYLGVFE+E +AAKA+D +A ++FGD A++NF
Sbjct:  165 FKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.090e-16
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA QHF + A +NF
Sbjct:  350 FKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 403          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.290e-16
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
            ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA QHF + A +NF
Sbjct:  408 FKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 461          
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Match: A0A835Z3I9_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I9_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.760e-13
Identity = 31/53 (58.49%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVN 53
            ++GVC+TR GKWRAVIY  RKQ YLGV++SE+ AA+A++ +A +HFG  A +N
Sbjct:  240 FKGVCITRAGKWRAVIYIGRKQKYLGVYDSELQAARAYNDSALEHFGAGAKLN 292          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|137719 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH07_9STRA6.910e-33100.00AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A836CI56_9STRA8.620e-2994.44AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5JUY3_9PHAE1.510e-2488.89AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D7FZ71_ECTSI1.140e-2385.19AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LCQ5_9PHAE1.140e-2385.19AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A6V1UZI2_HETAK3.000e-1766.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK3.580e-1766.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LFR4_ECTSI2.090e-1666.67Pathogenesis-related transcriptional factor and ER... [more]
A0A6H5KQM0_9PHAE2.290e-1666.67AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A835Z3I9_9STRA1.760e-1358.49AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 37..54
score: 40.09
coord: 1..12
score: 49.09
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 1..54
e-value: 3.1E-5
score: 32.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 1..43
e-value: 8.0E-6
score: 26.0
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 1..54
score: 13.603602
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 1..54
e-value: 1.4E-16
score: 62.3
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:509391..509552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|137719mRNA_4913Tribonema minus UTEX_B_3156 mRNAContig_23 509391..509552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|137719|gw1.23.111.1 ID=Trimin1|137719|gw1.23.111.1|Name=jgi.p|Trimin1|137719|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=54bp
YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQA
MVNF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf