Trimin1|137564|gw1.46.48.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|137564
Unique NameTrimin1|137564|gw1.46.48.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length132
Homology
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BLAST of jgi.p|Trimin1|137564 vs. uniprot
Match: A0A835YVE4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE4_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.270e-24
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 
Query:    1 FESLRRLDLRNNGLISVPNSLAISLPQLHELRLQDNAISCLPDNISDLM 49
            FESLRRLDLRNNGLISVPNSLAISLPQLHELRLQDNAISCLPDNISDLM
Sbjct:    1 FESLRRLDLRNNGLISVPNSLAISLPQLHELRLQDNAISCLPDNISDLM 49
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|137564 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YVE4_9STRA2.270e-24100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 48..71
e-value: 4.9
score: 15.8
coord: 1..24
e-value: 37.0
score: 8.6
coord: 94..117
e-value: 0.097
score: 21.8
coord: 25..47
e-value: 1.6
score: 17.7
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 3..20
e-value: 0.35
score: 11.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 50..107
e-value: 9.0E-10
score: 38.2
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 3..24
score: 7.072797
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..131
e-value: 4.1E-31
score: 109.4
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 2..129
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 2..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:60410..61033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|137564mRNA_4553Tribonema minus UTEX_B_3156 mRNAContig_46 60410..61033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|137564|gw1.46.48.1 ID=Trimin1|137564|gw1.46.48.1|Name=jgi.p|Trimin1|137564|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=132bp
FESLRRLDLRNNGLISVPNSLAISLPQLHELRLQDNAISCLPDNISDLMQ
LKVLLLQRNCLEALPPALYRLKALEQLNVAANSIRAVSAAIEDLARLTSL
DLSGNALAALPETIANLAALQFFDASDNEAAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf