Trimin1|136726|gw1.210.40.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|136726
Unique NameTrimin1|136726|gw1.210.40.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length448
Homology
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: A0A835Z1N5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N5_9STRA)

HSP 1 Score: 250 bits (638), Expect = 9.880e-75
Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
Query:    1 TELSLKVEAELLGQYDELVPGPMPGQRARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFQQGIWACPAAPHRVRLFXXXXXXXXXXXXXXXXXXXXRHALEEDPSSVPTLVXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXYEAMELRAGNAREARDVYERGLAASMAR 448
            TELSLKVEAELLGQYDELVPGPMPGQRARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFQQGIWACPAAPHRVRLFXXXXXXXXXXXXXXXXXXXXRHALEEDPSSVPTLVXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXYEAMELRAGNAREARDVYERGLAASMAR
Sbjct:    1 TELSLKVEAELLGQYDELVPGPMPGQRARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFQQGIWACPAAPHRVRLFXXXXXXXXXXXXXXXXXXXXRHALEEDPSSVPTLVXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXYEAMELRAGNAREARDVYERGLAASMAR 448          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: A0A7S4DG14_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG14_HETAK)

HSP 1 Score: 129 bits (324), Expect = 1.040e-29
Identity = 67/115 (58.26%), Postives = 83/115 (72.17%), Query Frame = 0
Query:    1 TELSLKVEAELLGQYDELVPGPMPGQR-ARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEE 114
            T LS KV +EL+  YDE VPGP P +  AR LPINLDL++Y A+QAMI GD    +R+YK+C+ELDPRDGR W+ LAR+E ++     A  L+  GL+ S  NPYLLQAYGVMEE
Sbjct:  116 TTLSKKVYSELMSTYDEQVPGPDPSKPPARALPINLDLMTYHARQAMIKGDEAVGLRIYKKCLELDPRDGRAWLALARHESRRKRFEVAEKLFLKGLTYSRGNPYLLQAYGVMEE 230          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: D7FP63_ECTSI (PsbB mRNA maturation factor Mbb1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP63_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.060e-28
Identity = 73/128 (57.03%), Postives = 84/128 (65.62%), Query Frame = 0
Query:    1 TELSLKVEAELLGQYDELVPGPMP------------GQR--ARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEE 114
            TELS KVEAEL  +YD +VPGP              GQ    RPL INLDLLSY+AKQ  + G+  EA RLY+ CVELDPRDGRGW+GLAR   K     +A+ L+E GL N  DNPYLLQA+ VMEE
Sbjct:  296 TELSAKVEAELFEEYDAMVPGPAASAVGNNAGGDGAGQERTGRPLKINLDLLSYQAKQKNMKGNYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEE 423          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: A0A7S1XW26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW26_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.190e-21
Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 0
Query:    1 TELSLKVEAELLGQYDELVPGPMPGQRARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYG 110
            ++LS +VE  LL  YDE VP P P  R RPL +NLDLL+Y A+     G   EAV++++RC+ LDP DGR W+ LAR     G   +A+ L+E G+   P NP++LQAYG
Sbjct:   22 SDLSRRVEESLLALYDEQVPAP-PKARRRPLKVNLDLLNYSARNLKRKGRLNEAVKVWQRCLRLDPHDGRAWLALARMSANAGGHTKAKQLFEEGIRFCPGNPFILQAYG 130          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: A0A7S3B3F3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B3F3_9EUKA)

HSP 1 Score: 89.0 bits (219), Expect = 1.080e-16
Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 0
Query:   28 ARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEE 114
            +RPL INLDLL+++A+  +  GD   A   YKRC++L+P+DGR W+GL++   +QG    A  L + GL   P NPYLLQA+G ++E
Sbjct:   64 SRPLRINLDLLTHRARVLVQRGDRKGAAATYKRCMQLEPQDGRAWLGLSQLRRRQGREEEAARLLQGGLRVDPANPYLLQAWGTLQE 150          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: A0A7S2XUS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS2_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.220e-15
Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 0
Query:   14 QYDELVPGP----------MPGQRARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQG----------------------NSARARALWETGLSNSPDNPYLLQAYGVMEE 114
            ++D  +PGP           P  + RP+ ++ DLL+++AKQA+   + T A  LY+RC++L+PRD R W+GLAR E + G                      N  +A+ +++ GL   P+NPYLLQ  GV+EE
Sbjct:    6 RFDVQIPGPDAGGISPVVQKPPVKTRPVGLHFDLLAHQAKQALRNKNVTLAAALYRRCLQLNPRDARAWLGLARIETRGGVPLPTKGNAEGPGKPRHWSSHLNYVKAKEIYQQGLRRCPNNPYLLQGLGVLEE 138          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: W7TNM5_9STRA (PsbB mRNA maturation factor n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNM5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.440e-15
Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = 0
Query:    3 LSLKVEAELLGQYDELVPGPMPGQRA-RPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEE 114
            LS  V   +L +  + V  P    R  +PLP  LDLL+Y AK+A+   +  EA R+Y+RC+ELD  DGR ++GLAR E ++ N   A+A++E  L    DNP++LQAYGV ++
Sbjct:  291 LSKAVNERMLEEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQ 403          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: A0A7S1TD61_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD61_9RHOD)

HSP 1 Score: 86.3 bits (212), Expect = 1.960e-14
Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = 0
Query:    3 LSLKVEAELLGQYDELVP---GPMPGQR-ARPLPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEE 114
            L  KV+  L+ + D + P   G +     +RPL IN+DL  + A+Q+   G+++EA+RL++RCV++DP DGRGW+GLAR    +G    +R  +   +     N +LLQA+G+MEE
Sbjct:   31 LERKVKEVLMDEEDRVPPLGAGSLENYLPSRPLKINVDLSHFHARQSQKRGNSSEALRLFRRCVDMDPYDGRGWLGLARLLFLRGEEEASRETFRNAVRYCRSNSHLLQAWGIMEE 146          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: A0A5J4YY57_PORPP (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY57_PORPP)

HSP 1 Score: 75.1 bits (183), Expect = 9.950e-11
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   31 LPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSPDNPYLLQAYGVMEE 114
            L IN+DL   +A+ A+      EA RL++RCVEL+  D RGW+GLAR E ++ N    R ++   L     +PYLLQA+GV+E+
Sbjct:  178 LKINVDLAHSRARSAVKRAQLDEAARLFRRCVELNRYDARGWLGLARIEFRRKNYEEMRRVFSAALKLLRKSPYLLQAWGVLEQ 261          
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Match: A0A1Z5JMI6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMI6_FISSO)

HSP 1 Score: 74.7 bits (182), Expect = 1.410e-10
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0
Query:   31 LPINLDLLSYKAKQAMIAGDATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNS-------PD---NPYLLQAYGVMEE 114
            LPIN D L+Y AK+ M  G   EA  LY+R VE+DPRDGR ++GL+R   ++ +   AR     G++NS       PD   NP+LLQA G +EE
Sbjct:  261 LPINADRLNYMAKKEMKKGRVEEAEELYERAVEIDPRDGRAYLGLSRCAQRRQDFKLAREWLNLGIANSASTFNGNPDRGANPFLLQALGCLEE 354          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136726 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A835Z1N5_9STRA9.880e-75100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S4DG14_HETAK1.040e-2958.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7FP63_ECTSI1.060e-2857.03PsbB mRNA maturation factor Mbb1 n=2 Tax=Ectocarpu... [more]
A0A7S1XW26_9STRA1.190e-2148.18Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3B3F3_9EUKA1.080e-1647.13Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S2XUS2_9STRA1.220e-1535.34Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
W7TNM5_9STRA5.440e-1543.36PsbB mRNA maturation factor n=3 Tax=Monodopsidacea... [more]
A0A7S1TD61_9RHOD1.960e-1439.66Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YY57_PORPP9.950e-1144.05PsbB mRNA maturation factor Mbb1, chloroplastic n=... [more]
A0A1Z5JMI6_FISSO1.410e-1045.74Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 344..377
e-value: 7.7
score: 15.5
coord: 307..340
e-value: 440.0
score: 0.5
coord: 69..102
e-value: 13.0
score: 13.9
coord: 171..204
e-value: 19.0
score: 12.5
coord: 273..306
e-value: 60.0
score: 8.1
coord: 35..68
e-value: 12.0
score: 14.3
coord: 239..272
e-value: 4.8
score: 16.1
coord: 137..170
e-value: 3.9
score: 16.4
coord: 205..238
e-value: 27.0
score: 11.2
coord: 103..136
e-value: 9.7
score: 15.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 239..272
score: 8.2309
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 219..251
e-value: 77.0
score: 8.9
coord: 117..149
e-value: 310.0
score: 4.4
coord: 358..390
e-value: 910.0
score: 1.1
coord: 83..115
e-value: 2.2
score: 17.3
coord: 49..81
e-value: 0.0094
score: 25.1
coord: 287..319
e-value: 37.0
score: 11.3
coord: 321..356
e-value: 37.0
score: 11.2
coord: 151..183
e-value: 260.0
score: 5.0
coord: 185..217
e-value: 350.0
score: 4.1
coord: 392..427
e-value: 500.0
score: 3.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 352..447
e-value: 3.4E-7
score: 32.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 270..346
e-value: 1.1E-9
score: 40.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 31..269
e-value: 5.8E-44
score: 152.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 216..386
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 48..271
NoneNo IPR availablePFAMPF14559TPR_19coord: 252..313
e-value: 2.1E-6
score: 28.1
coord: 45..106
e-value: 5.5E-7
score: 29.9
coord: 117..173
e-value: 1.4E-5
score: 25.4
IPR044624Tetratricopeptide-like repeat protein Mbb1-likePANTHERPTHR44917PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107coord: 27..400

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_210contigContig_210:158608..159951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|136726mRNA_15928Tribonema minus UTEX_B_3156 mRNAContig_210 158608..159951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|136726|gw1.210.40.1 ID=Trimin1|136726|gw1.210.40.1|Name=jgi.p|Trimin1|136726|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=448bp
TELSLKVEAELLGQYDELVPGPMPGQRARPLPINLDLLSYKAKQAMIAGD
ATEAVRLYKRCVELDPRDGRGWMGLARYEMKQGNSARARALWETGLSNSP
DNPYLLQAYGVMEEKLGNYARALELYTTATRVDSTHAASWVALAMLYQRR
RRVPEARRCFEAATAAAPGSYYAWQAWGVLEESQGDYDAARDKFKASARA
NSRNAALFQAWGVMEARLANYRTAEELFRRGLAENPKSSFTLQAWAVMEA
RRGRTAQAIALFRRAIELRPRDAAVHQAYGLVLKGAGDVAGARAALRRAT
RADPRHAPSWQALGALEAEAGDADAARATFQQGIWACPAAPHRVRLFQAW
GVLEARAGRPADARACFRHALEEDPSSVPTLVAWALMEAAAGVPVRARAL
FEVAVGAAATAAAAASVWAAYEAMELRAGNAREARDVYERGLAASMAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR044624Mbb1-like