Trimin1|136365|gw1.66.80.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|136365
Unique NameTrimin1|136365|gw1.66.80.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length222
Homology
BLAST of jgi.p|Trimin1|136365 vs. uniprot
Match: A0A836C9R5_9STRA (UBA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R5_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 9.870e-151
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query:    1 PCVDVWDQQSLVYTTAHPGADEVLWNADEGFFFHKINRALCGDFVIVVRFGXXXXXXXXAAGLPPYSDTRVLLRYANCAGFVLPGVPLRLSLDEIDVSARYADGFDGGFCMTAVFDTVDGSAIQDDQYFSDALEPLLRGAAAARQGLLDIASFHVLTANMRRLDKLLAMGYPPEAATLGLQLTGNDSARAVQLIEEGLGAKLSTKTQFSPMSGSDVSVSPVS 222
            PCVDVWDQQSLVYTTAHPGADEVLWNADEGFFFHKINRALCGDFVIVVRFGXXXXXXXXAAGLPPYSDTRVLLRYANCAGFVLPGVPLRLSLDEIDVSARYADGFDGGFCMTAVFDTVDGSAIQDDQYFSDALEPLLRGAAAARQGLLDIASFHVLTANMRRLDKLLAMGYPPEAATLGLQLTGNDSARAVQLIEEGLGAKLSTKTQFSPMSGSDVSVSPVS
Sbjct:    1 PCVDVWDQQSLVYTTAHPGADEVLWNADEGFFFHKINRALCGDFVIVVRFGXXXXXXXXAAGLPPYSDTRVLLRYANCAGFVLPGVPLRLSLDEIDVSARYADGFDGGFCMTAVFDTVDGSAIQDDQYFSDALEPLLRGAAAARQGLLDIASFHVLTANMRRLDKLLAMGYPPEAATLGLQLTGNDSARAVQLIEEGLGAKLSTKTQFSPMSGSDVSVSPVS 222          
BLAST of jgi.p|Trimin1|136365 vs. uniprot
Match: A0A1V9YVV8_9STRA (Formin-homology 2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVV8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.270e-6
Identity = 52/206 (25.24%), Postives = 84/206 (40.78%), Query Frame = 0
Query:    1 PCVDVWDQQSLVYTTAHPGADE------VLWNADEGFF--FHKINRALCGDFVIVVRFGXXXXXXXXAAGLPPYSDTRVLLRYANCAGFVLPGVPLRLSLDEIDVSARYADGF-DGGFCMTAVF---DTVDGSAIQDDQYFSDALEPLLRGAAAARQGLLDIASFHVLTANMRRLDKLLAMGYPPEAATLGLQLTGNDSARAVQLI 194
            P + +WD   +++TT  P          V WN ++GF          L G F I+  FG                 +RVL RY +   F+ PG+ + L    +D+  +Y  GF D  F +  VF   +T     +  D            G  A +QG+++IAS HV+  +       +  G+   A+T  LQ + N    A+ ++
Sbjct:  243 PLIQIWDDWRMIFTTGKPAISSTYSSPVVDWNPEDGFLAILWDTGIPLDGGFSILCSFGDDYTENEDDPA------SRVLFRYMDSTWFLTPGL-VTLKKSNLDMMKQYEHGFEDENFSVDMVFHNSNTPQRCYVPVDY----------TGNYAVKQGIVEIASHHVVAPDPSMYLNFVKNGFDTTASTFALQRSQNAPNLALDIL 431          
BLAST of jgi.p|Trimin1|136365 vs. uniprot
Match: A0A1V9ZJH8_9STRA (Formin-homology 2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJH8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.700e-6
Identity = 62/229 (27.07%), Postives = 100/229 (43.67%), Query Frame = 0
Query:    1 PCVDVWDQQSLVYTTAHPGADEVL----WNADEGFF--FHKINRALCGDFVIVVRFGXXXXXXXXAAGLPPYSDTRVLLRYANCAGFVLPGVPLRLSLDEIDVSARYADGF-DGGFCMTAVFDTVDGSAIQDDQYFSDALEPL-LRGAAAARQGLLDIASFHVLTANMRRLDKLLAMGYPPEAATLGLQLTGNDSARAVQLIEEGLGAKLSTKTQFSPMSGSDVSVSPV 221
            P V +WD   LV++ A   A + +    WN ++GF          L G F I+  FG        +    P S  RVL RY +   F+ PG+ + L    +D+  +Y  GF D  F +  VF +   S +    Y      P+   G  A +QG+++IAS HV+  +       +  G+   A+T  LQ   N    A+ ++       + ++   SP+ G D ++ PV
Sbjct:  228 PLVQIWDDWRLVFSNAKDAAHDAVPVIDWNPEDGFLAILWDTGIPLDGGFSILCSFGDDYGD---SEDNDPAS--RVLFRYMDSTWFLSPGL-VTLKKATLDMMKQYEHGFEDDNFSVDMVFHS---SVMPARGYV-----PVDYTGNYAVKQGVVEIASHHVVAPDPSIYLNFVKNGFDATASTFALQRASNAPNLALDILHSDGLTTIFSRLPPSPV-GKDDTLQPV 441          
BLAST of jgi.p|Trimin1|136365 vs. uniprot
Match: A0A6G0WC67_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC67_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.290e-6
Identity = 54/208 (25.96%), Postives = 92/208 (44.23%), Query Frame = 0
Query:    1 PCVDVWDQQSLVYTTA---HPGADEVL--WNADEGFF--FHKINRALCGDFVIVVRFGXXXXXXXXAAGLPPYSDTRVLLRYANCAGFVLPGVPLRLSLDEIDVSARYADGF-DGGFCMTAVFDTVDGSAIQDDQYFSDALEPL-LRGAAAARQGLLDIASFHVLTANMRRLDKLLAMGYPPEAATLGLQLTGNDSARAVQLIE-EGL 198
            P V +WD   +V++TA   +P +   +  WN  +GF     +    L G F I+  FG          G P    +RVL R+ +   F   G+     LD +D+   Y  GF D  F    +F         + +    +  P+   G  A +QG+++IAS H+++ +       +  G+ P+A+T  LQ + N    A+ ++  EG+
Sbjct:  234 PLVQIWDDTQMVFSTASDENPNSQRPVIDWNPQDGFLAILWETGILLDGGFSILCSFGDDYDDHQ---GDP---SSRVLFRHMDSTWFHSEGLVTLKKLD-LDMMKEYEHGFEDEHFSADIIF--------HESKTTPKSYVPVDFTGNYAVKQGIIEIASHHIVSPDPTMYSNFVKNGFDPDASTFALQRSQNAPNVALDILHSEGI 426          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136365 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836C9R5_9STRA9.870e-151100.00UBA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A1V9YVV8_9STRA1.270e-625.24Formin-homology 2 domain-containing protein n=1 Ta... [more]
A0A1V9ZJH8_9STRA1.700e-627.07Formin-homology 2 domain-containing protein n=1 Ta... [more]
A0A6G0WC67_9STRA2.290e-625.96Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.10coord: 161..198
e-value: 1.5E-5
score: 26.9
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 157..197
score: 8.884134
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 152..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_66contigContig_66:495619..498891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|136365mRNA_9692Tribonema minus UTEX_B_3156 mRNAContig_66 495619..498891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|136365|gw1.66.80.1 ID=Trimin1|136365|gw1.66.80.1|Name=jgi.p|Trimin1|136365|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=222bp
PCVDVWDQQSLVYTTAHPGADEVLWNADEGFFFHKINRALCGDFVIVVRF
GGGDDDDNAAAGLPPYSDTRVLLRYANCAGFVLPGVPLRLSLDEIDVSAR
YADGFDGGFCMTAVFDTVDGSAIQDDQYFSDALEPLLRGAAAARQGLLDI
ASFHVLTANMRRLDKLLAMGYPPEAATLGLQLTGNDSARAVQLIEEGLGA
KLSTKTQFSPMSGSDVSVSPVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR009060UBA-like_sf