Trimin1|135109|gw1.106.7.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|135109
Unique NameTrimin1|135109|gw1.106.7.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length163
Homology
BLAST of jgi.p|Trimin1|135109 vs. uniprot
Match: A0A835ZD53_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD53_9STRA)

HSP 1 Score: 307 bits (786), Expect = 2.040e-105
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 RDPACGYDFIRGKNEEAGGNEGDFLSRMDAQTAHSRRKLEERRAEEAYNDRQDKKSCPQCGAVQSYDEYAKKKTKCAGCGATYSSATAWSRGTWNARNAAVAARSNQRMAQLQQRVDAETRGLSALGQQQQVRRFRQAELLKQRAARQPFIDRMEADVGKRER 163
            RDPACGYDFIRGKNEEAGGNEGDFLSRMDAQTAHSRRKLEERRAEEAYNDRQDKKSCPQCGAVQSYDEYAKKKTKCAGCGATYSSATAWSRGTWNARNAAVAARSNQRMAQLQQRVDAETRGLSALGQQQQVRRFRQAELLKQRAARQPFIDRMEADVGKRER
Sbjct:    1 RDPACGYDFIRGKNEEAGGNEGDFLSRMDAQTAHSRRKLEERRAEEAYNDRQDKKSCPQCGAVQSYDEYAKKKTKCAGCGATYSSATAWSRGTWNARNAAVAARSNQRMAQLQQRVDAETRGLSALGQQQQVRRFRQAELLKQRAARQPFIDRMEADVGKRER 163          
BLAST of jgi.p|Trimin1|135109 vs. uniprot
Match: A0A7S4A7J4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7J4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.360e-10
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    4 ACGYDFIRGKNEEAGGNEGDFLSRMDAQTAHSRRKLEERRAEEAYNDRQDKKSCPQCGAVQSYDEYAKKKTKCAGC 79
            ACGY+F R   ++A G+E  F+ R+     HSRR  EE   ++ Y+ R DKK CP+CGAVQSYDEY ++ +K   C
Sbjct:  276 ACGYEFARDSGKKADGDE--FVERLARSARHSRRAKEEAIGKQEYSYRLDKKQCPKCGAVQSYDEYVERFSKGRNC 349          
BLAST of jgi.p|Trimin1|135109 vs. uniprot
Match: G4YKZ3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKZ3_PHYSP)

HSP 1 Score: 58.5 bits (140), Expect = 8.350e-8
Identity = 31/62 (50.00%), Postives = 38/62 (61.29%), Query Frame = 0
Query:   28 MDAQTAHSRRKLEERRAEEAYNDRQDKKSCPQCGAVQSYDEYAKKKTKCAGCGATYSSATAW 89
            M+A   + ++KLE  R E  YN R DKKSCP+CGA QSY E+  KK KC  CG  +    AW
Sbjct:    1 MEAAERNRQKKLELSRGENDYNARLDKKSCPKCGAPQSYSEFRDKKKKCQMCGVEFRFVNAW 62          
BLAST of jgi.p|Trimin1|135109 vs. uniprot
Match: F0Y7E4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7E4_AURAN)

HSP 1 Score: 53.1 bits (126), Expect = 4.310e-5
Identity = 29/72 (40.28%), Postives = 40/72 (55.56%), Query Frame = 0
Query:   12 GKNEEAGGNEGDFLSRMDAQTAHSRRKLEERRAEEAYNDRQDKKSCPQCGAVQSYDEYAKKKTKCAGCGATY 83
            G+  +A     +F+ R DA T   RR+ E    +  Y+ + DKK CP CGAVQSYDE  +K+ +C  C   Y
Sbjct: 1340 GEGPDAEAKTDNFIQRQDAWTRKVRREKEAAIGKANYDVKLDKKVCPSCGAVQSYDEVEEKRDRCVECAVAY 1411          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|135109 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZD53_9STRA2.040e-105100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S4A7J4_9STRA2.360e-1047.37Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
G4YKZ3_PHYSP8.350e-850.00Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
F0Y7E4_AURAN4.310e-540.28Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_106contigContig_106:344900..345388 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|135109mRNA_9516Tribonema minus UTEX_B_3156 mRNAContig_106 344900..345388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|135109|gw1.106.7.1 ID=Trimin1|135109|gw1.106.7.1|Name=jgi.p|Trimin1|135109|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp
RDPACGYDFIRGKNEEAGGNEGDFLSRMDAQTAHSRRKLEERRAEEAYND
RQDKKSCPQCGAVQSYDEYAKKKTKCAGCGATYSSATAWSRGTWNARNAA
VAARSNQRMAQLQQRVDAETRGLSALGQQQQVRRFRQAELLKQRAARQPF
IDRMEADVGKRER
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