Trimin1|134867|gw1.108.20.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|134867
Unique NameTrimin1|134867|gw1.108.20.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length127
Homology
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BLAST of jgi.p|Trimin1|134867 vs. uniprot
Match: A0A835ZE74_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE74_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.260e-19
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    1 LESLTELRLSNCGCAQARDLGAALARNRGLRTLSLPRNALRDAG 44
            LESLTELRLSNCGCAQARDLGAALARNRGLRTLSLPRNALRDAG
Sbjct:    1 LESLTELRLSNCGCAQARDLGAALARNRGLRTLSLPRNALRDAG 44
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134867 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZE74_9STRA2.260e-19100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 83..110
e-value: 0.68
score: 18.3
coord: 1..26
e-value: 28.0
score: 7.0
coord: 55..82
e-value: 0.001
score: 28.4
coord: 27..54
e-value: 0.0044
score: 26.3
NoneNo IPR availablePANTHERPTHR24106NACHT, LRR AND CARD DOMAINS-CONTAININGcoord: 2..125
NoneNo IPR availablePANTHERPTHR24106:SF250RNI-LIKE SUPERFAMILY PROTEINcoord: 2..125
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 3..125
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 82..104
e-value: 2.0E-4
score: 21.2
coord: 54..77
e-value: 6.2E-7
score: 29.0
coord: 27..49
e-value: 0.33
score: 11.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..127
e-value: 2.2E-36
score: 127.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_108contigContig_108:207646..208459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|134867mRNA_15556Tribonema minus UTEX_B_3156 mRNAContig_108 207646..208459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|134867|gw1.108.20.1 ID=Trimin1|134867|gw1.108.20.1|Name=jgi.p|Trimin1|134867|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=127bp
LESLTELRLSNCGCAQARDLGAALARNRGLRTLSLPRNALRDAGARSLAD
ALGTNTTLHALDVARNGIGDDGAEAFAHALENNSTLHTLNLSGNMIQDNG
AAAFIDAFTDNITLQGLDLSGNAISEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf