Trimin1|134699|gw1.3.150.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|134699
Unique NameTrimin1|134699|gw1.3.150.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length128
Homology
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: A0A835YWU5_9STRA (Histone H3, embryonic (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWU5_9STRA)

HSP 1 Score: 237 bits (604), Expect = 8.470e-79
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREPKRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MARTRQTAAKSTGGKAPRKQLATKAARAGNREPKRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL
Sbjct:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREPKRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: G0NNI2_CAEBE (Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=G0NNI2_CAEBE)

HSP 1 Score: 204 bits (518), Expect = 1.420e-65
Identity = 111/131 (84.73%), Postives = 121/131 (92.37%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREP---KRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKAAR   + P   K+PHRYRPGTVALREIR+YQKSTELL+RK+PFQR+VRE+AQDFKTDLRFQ SAV+ALQEAAEAYLVGLFEDTNLCAIHA RVTIMPKDIQLARR+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKDVKVPGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.020e-65
Identity = 112/131 (85.50%), Postives = 120/131 (91.60%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREP---KRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKAAR         K+PHRYRPGTVALREIR+YQKSTELL+RK+PFQR+VRE+AQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHA RVTIMPKDIQLARR+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: E1ZSZ5_CHLVA (Histone H3 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZSZ5_CHLVA)

HSP 1 Score: 203 bits (516), Expect = 2.140e-65
Identity = 110/128 (85.94%), Postives = 118/128 (92.19%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREPKRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKA       P++PHRYRPGTVALREIRKYQKSTELL+RK+PFQR+VRE+AQDFKTDLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHA RVTIMPKDIQLARR+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKA------RPQKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 122
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: E1ZFV1_CHLVA (Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1ZFV1_CHLVA)

HSP 1 Score: 202 bits (514), Expect = 5.800e-65
Identity = 112/131 (85.50%), Postives = 119/131 (90.84%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREP---KRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKAAR         K+PHRYRPGTVALREIRKYQKSTELL+RK+PFQR+VRE+AQDFKTDLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHA RVTIMPKDIQLARR+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: E1ZR66_CHLVA (Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=E1ZR66_CHLVA)

HSP 1 Score: 202 bits (514), Expect = 5.800e-65
Identity = 112/131 (85.50%), Postives = 119/131 (90.84%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREP---KRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKAAR         K+PHRYRPGTVALREIRKYQKSTELL+RK+PFQR+VRE+AQDFKTDLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHA RVTIMPKDIQLARR+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: A0A3R7LZR1_PENVA (Histone H3 n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7LZR1_PENVA)

HSP 1 Score: 202 bits (513), Expect = 6.350e-65
Identity = 109/128 (85.16%), Postives = 119/128 (92.97%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREPKRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKAAR      K+PHRYRPGTVALREIR+YQKSTELL+RK+PFQR+VRE+AQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHA RVTIMPKDIQLARR+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARV-----KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 123
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 202 bits (514), Expect = 7.050e-65
Identity = 111/131 (84.73%), Postives = 120/131 (91.60%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREP---KRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKAAR         K+PHRYRPGTVALREIR+YQKSTELL+RK+PFQR+VRE+AQDFKTDLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHA RVTIMPKDIQLARR+
Sbjct:    7 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 137
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: A0A7K9FU69_STEPR (Histone H3 (Fragment) n=2 Tax=Aves TaxID=8782 RepID=A0A7K9FU69_STEPR)

HSP 1 Score: 202 bits (513), Expect = 8.230e-65
Identity = 110/131 (83.97%), Postives = 120/131 (91.60%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREP---KRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKAAR   R     K+PHRYRPGTVALREIR+YQKSTELL+RK+PFQR+VRE+AQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHA RVTIMPKDIQLARR+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSARATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131
[Close]
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Match: A0A7S3FY28_9SPIT (Histone H3 (Fragment) n=7 Tax=Eukaryota TaxID=2759 RepID=A0A7S3FY28_9SPIT)

HSP 1 Score: 202 bits (513), Expect = 8.510e-65
Identity = 111/131 (84.73%), Postives = 119/131 (90.84%), Query Frame = 0 
Query:    1 MARTRQTAAKSTGGKAPRKQLATKAARAGNREP---KRPHRYRPGTVALREIRKYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAGRVTIMPKDIQLARRL 128
            MART+QTA KSTGGKAPRKQLATKAAR         K+PHRYRPGTVALREIRKYQKSTELL+RK+PFQR+VRE+AQDFKTDLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHA RVTIMPKD+QLARR+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRI 131
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134699 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWU5_9STRA8.470e-79100.00Histone H3, embryonic (Fragment) n=1 Tax=Tribonema... [more]
G0NNI2_CAEBE1.420e-6584.73Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=G0N... [more]
W4GZ05_9STRA2.020e-6585.50Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ... [more]
E1ZSZ5_CHLVA2.140e-6585.94Histone H3 n=1 Tax=Chlorella variabilis TaxID=5540... [more]
E1ZFV1_CHLVA5.800e-6585.50Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1Z... [more]
E1ZR66_CHLVA5.800e-6585.50Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=E1Z... [more]
A0A3R7LZR1_PENVA6.350e-6585.16Histone H3 n=1 Tax=Penaeus vannamei TaxID=6689 Rep... [more]
A0A6V1P6C6_HETAK7.050e-6584.73Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A7K9FU69_STEPR8.230e-6583.97Histone H3 (Fragment) n=2 Tax=Aves TaxID=8782 RepI... [more]
A0A7S3FY28_9SPIT8.510e-6584.73Histone H3 (Fragment) n=7 Tax=Eukaryota TaxID=2759... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 111..128
score: 69.27
coord: 95..111
score: 96.93
coord: 55..72
score: 75.6
coord: 77..95
score: 80.78
coord: 3..17
score: 83.91
coord: 17..31
score: 68.7
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 31..128
e-value: 2.0E-62
score: 223.4
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..128
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..128
e-value: 1.3E-64
score: 218.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..128
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..128
e-value: 2.2E-48
score: 163.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR11426:SF198SUBFAMILY NOT NAMEDcoord: 1..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:1010443..1010826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|134699mRNA_365Tribonema minus UTEX_B_3156 mRNAContig_3 1010443..1010826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|134699|gw1.3.150.1 ID=Trimin1|134699|gw1.3.150.1|Name=jgi.p|Trimin1|134699|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=128bp
MARTRQTAAKSTGGKAPRKQLATKAARAGNREPKRPHRYRPGTVALREIR
KYQKSTELLLRKMPFQRVVREVAQDFKTDLRFQGSAVLALQEAAEAYLVG
LFEDTNLCAIHAGRVTIMPKDIQLARRL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3