Trimin1|132596|gw1.20.44.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|132596
Unique Name	Trimin1\|132596\|gw1.20.44.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	58

Homology

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: A0A836CHF2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF2_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.600e-32
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV
Sbjct:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: A0A482SA88_9ARCH (EF-hand domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SA88_9ARCH)

HSP 1 Score: 98.2 bits (243), Expect = 4.780e-25
Identity = 46/58 (79.31%), Postives = 53/58 (91.38%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFSEEEI++AFRFIDLD N F+GAAEIRHIL+CMGE+ITDEE+D MI +VD DGDGQV
Sbjct:   47 EFSEEEITAAFRFIDLDHNNFVGAAEIRHILVCMGEMITDEEIDMMINMVDVDGDGQV 104

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: F0XXY1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXY1_AURAN)

HSP 1 Score: 94.7 bits (234), Expect = 4.330e-24
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFS+ EI +AF+FIDLD+NG+IGA+EIRH+L+CMGELITDEEVD MI +VD DGDGQV
Sbjct:   28 EFSDAEIEAAFKFIDLDKNGYIGASEIRHVLVCMGELITDEEVDMMIKMVDNDGDGQV 85

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: A0A7S2FW97_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW97_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 8.780e-23
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFS+ EI +AFRFIDLD+NGFIGAAEIRHILICMGELITDEEVD MI ++D DGDGQV
Sbjct:  490 EFSDAEIEAAFRFIDLDKNGFIGAAEIRHILICMGELITDEEVDMMIGMIDGDGDGQV 547

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: A0A6A5ASX8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ASX8_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.260e-22
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFSE+++  AF+FIDLD+N FIGAAEIRHILICMGELITD EVD M+ +VD DGDGQV
Sbjct:   50 EFSEDDVLGAFKFIDLDKNTFIGAAEIRHILICMGELITDAEVDEMVRMVDRDGDGQV 107

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: A0A2D4BY33_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY33_PYTIN)

HSP 1 Score: 95.9 bits (237), Expect = 1.060e-21
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFSEEEI  AFRF+DLD+N FIGAAE+RH+LICMGELITDEE+D MI L D DGDGQV
Sbjct:  535 EFSEEEILGAFRFLDLDKNNFIGAAELRHLLICMGELITDEEIDEMIKLCDVDGDGQV 592

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: K3WZ00_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ00_GLOUD)

HSP 1 Score: 95.9 bits (237), Expect = 1.060e-21
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFSEEEI  AF+FIDLDRN F+GAAE+RH+LICMGELITDEE+D MI L D DGDGQV
Sbjct:  425 EFSEEEILGAFKFIDLDRNNFVGAAELRHLLICMGELITDEEIDMMIQLCDTDGDGQV 482

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: A0A2D4BKB2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKB2_PYTIN)

HSP 1 Score: 95.9 bits (237), Expect = 1.060e-21
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFSEEEI  AFRF+DLD+N FIGAAE+RH+LICMGELITDEE+D MI L D DGDGQV
Sbjct:  535 EFSEEEILGAFRFLDLDKNNFIGAAELRHLLICMGELITDEEIDEMIKLCDVDGDGQV 592

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: A0A5D6XRG4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRG4_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.980e-21
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EF+EEEI  AFRF+DLDRN FIGAAE+RH+LICMGELITDEE+D M+ L D DGDGQV
Sbjct:  537 EFTEEEILGAFRFLDLDRNNFIGAAELRHLLICMGELITDEEIDMMVKLCDTDGDGQV 594

[Close]

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Match: A0A1V9YHN9_9STRA (Calmodulin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YHN9_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.240e-21
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0

Query:    1 EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALVDFDGDGQV 58
            EFSE EI SAF+FIDLD+N FIGAAEIRHILICMGELITD EVD M+ +VD DGDGQ+
Sbjct:   50 EFSEAEILSAFKFIDLDKNTFIGAAEIRHILICMGELITDAEVDMMVKMVDRDGDGQI 107

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|132596 vs. uniprot

BLAST of jgi.p|Trimin1|132596 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CHF2_9STRA	2.600e-32	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A482SA88_9ARCH	4.780e-25	79.31	EF-hand domain-containing protein (Fragment) n=1 T...	[more]
F0XXY1_AURAN	4.330e-24	75.86	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A7S2FW97_9STRA	8.780e-23	82.76	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A6A5ASX8_9STRA	2.260e-22	75.86	Uncharacterized protein (Fragment) n=1 Tax=Aphanom...	[more]
A0A2D4BY33_PYTIN	1.060e-21	79.31	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]
K3WZ00_GLOUD	1.060e-21	79.31	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A2D4BKB2_PYTIN	1.060e-21	79.31	Uncharacterized protein (Fragment) n=1 Tax=Pythium...	[more]
A0A5D6XRG4_9STRA	1.980e-21	77.59	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A1V9YHN9_9STRA	2.240e-21	79.31	Calmodulin n=1 Tax=Thraustotheca clavata TaxID=745...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 5..58 e-value: 1.0E-8 score: 35.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 38..58 score: 10.105932
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 2..37 score: 12.05861
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 6..58 e-value: 3.9589E-12 score: 52.5501
None	No IPR available	GENE3D	1.10.238.10		coord: 3..58 e-value: 1.3E-16 score: 62.7
None	No IPR available	PANTHER	PTHR23050:SF432	SUBFAMILY NOT NAMED	coord: 1..58
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 1..58
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 15..27
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 3..58

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_20	contig	Contig_20:256778..256951 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|132596	mRNA_4067	Tribonema minus UTEX_B_3156	mRNA	Contig_20 256778..256951 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|132596|gw1.20.44.1 ID=Trimin1|132596|gw1.20.44.1|Name=jgi.p|Trimin1|132596|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=58bp
EFSEEEISSAFRFIDLDRNGFIGAAEIRHILICMGELITDEEVDAMIALV
DFDGDGQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair