Trimin1|131823|gw1.73.17.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|131823
Unique NameTrimin1|131823|gw1.73.17.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length148
Homology
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A835YL14_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL14_9STRA)

HSP 1 Score: 306 bits (784), Expect = 1.330e-105
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
Query:    1 FHTGAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNPQ 148
            FHTGAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNPQ
Sbjct:    1 FHTGAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNPQ 148          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A2D4CGT3_PYTIN (Structural maintenance of chromosomes protein 5 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGT3_PYTIN)

HSP 1 Score: 154 bits (389), Expect = 2.830e-44
Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 0
Query:    4 GAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNPQ 148
            G+I RV +HNFLTY D  F PGP+LN+++GPNG GKSSIVCA+ +GLAG+ K LGR++ +  F+ HE+++ + E+EL   + G RV+ R+ F  N   S W LDGR    K V   + A  IQ+DNLC FLPQD+VG+FS  NPQ
Sbjct:   25 GSIYRVKLHNFLTYTDAEFFPGPRLNLILGPNGTGKSSIVCALCVGLAGSTKLLGRADKVGQFVRHEKENGFTEIEL-YFDSGNRVIRRKIFRDNK--SIWYLDGREATLKQVTSMMEAAKIQIDNLCQFLPQDKVGEFSRMNPQ 166          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A8K0JMX2_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JMX2_9TREE)

HSP 1 Score: 158 bits (400), Expect = 4.190e-42
Identity = 75/145 (51.72%), Postives = 106/145 (73.10%), Query Frame = 0
Query:    4 GAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNPQ 148
            G+I R+ +HNFLTY +V F PGP LN+V+GPNG GKSSIVC + LGL   PK LGR+ +++ FIM  Q  A++E+ELE  + G+ V+ +RSF++N KGS W+L+G++   + V + ++ LGIQVDNLC FLPQD+V  F+   P+
Sbjct:  143 GSILRIKLHNFLTYHNVEFSPGPHLNLVIGPNGTGKSSIVCGIALGLGFPPKVLGRAPDVSSFIMTNQTEAFIELELEGKQEGRNVLIKRSFKKN-KGSVWELNGKSATAQQVSDTVSKLGIQVDNLCCFLPQDKVASFAAMTPK 286          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: D7FUV3_ECTSI (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV3_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 8.940e-42
Identity = 77/145 (53.10%), Postives = 103/145 (71.03%), Query Frame = 0
Query:    4 GAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHE-QQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNP 147
            G+I  + M NFL Y D     GP+LN+V+GPNG+GKS++VCA+ LGL G+PK LGR++NL+ F+MH  ++ A V VEL + + G  +   R+F R    S W ++GR+H  K V+ KI ALGIQVDNLCT LPQD+VGDFSG+ P
Sbjct:   35 GSIVSLKMKNFLVYKDAKAVFGPRLNMVVGPNGSGKSTLVCAIALGLGGSPKVLGRADNLSAFVMHGVKEDASVTVELYMPD-GNNLHVTRTFSRKNNSSNWHINGRSHSTKEVENKIRALGIQVDNLCTMLPQDKVGDFSGFTP 178          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A397EW01_9STRA (Structural maintenance of chromosomes protein 5 n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EW01_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.250e-41
Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 0
Query:    4 GAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNP 147
            G++ R+ +HNFLTY D    PGP+LN+V+GPNG GKSSIVCA+ +GL G+ K LGR++ + DF+ HE+   + E+EL      + VV RR+  R+ + S WQLDG+   +  V+E ++   IQ+DNLC FLPQD+VGDFS   P
Sbjct:   13 GSVFRIRLHNFLTYGDAELFPGPRLNVVIGPNGTGKSSIVCALCVGLGGSTKVLGRADKMGDFVQHEKDSGFTEIELFF--TRRNVVIRRNIFRDNR-STWQLDGKESTQNKVREVLSKAKIQIDNLCQFLPQDKVGDFSRMTP 153          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A2D4C5S1_PYTIN (Structural maintenance of chromosomes protein 5 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5S1_PYTIN)

HSP 1 Score: 154 bits (388), Expect = 1.700e-40
Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 0
Query:    4 GAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNPQ 148
            G+I RV +HNFLTY D  F PGP+LN+++GPNG GKSSIVCA+ +GLAG+ K LGR++ +  F+ HE+++ + E+EL   + G RV+ R+ F  N   S W LDGR    K V   + A  IQ+DNLC FLPQD+VG+FS  NPQ
Sbjct:   25 GSIYRVKLHNFLTYTDAEFFPGPRLNLILGPNGTGKSSIVCALCVGLAGSTKLLGRADKVGQFVRHEKENGFTEIEL-YFDSGNRVIRRKIFRDNK--SIWYLDGREATLKQVTSLMEAAKIQIDNLCQFLPQDKVGEFSRMNPQ 166          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A177WTY8_BATDL (Structural maintenance of chromosomes protein 5 n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WTY8_BATDL)

HSP 1 Score: 153 bits (386), Expect = 3.290e-40
Identity = 74/140 (52.86%), Postives = 99/140 (70.71%), Query Frame = 0
Query:    4 GAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFS 143
            G+I R+ + NFLTY+ V F PGP LN+V+GPNG GKS++VCA+ LGL G P  LGR+  L DF+ H +  A VE+EL+V   GK++V  R+FER    S W+++G +  EK +K +I AL IQVDNLC FLPQ+RV  F+
Sbjct:  686 GSIVRIKLTNFLTYSAVEFYPGPNLNMVVGPNGTGKSTVVCAIALGLCGRPDVLGRARELQDFVKHGENKAIVEIELKV--TGKKLVITRTFERGSNQSSWKINGLSAKEKEIKAEIEALAIQVDNLCQFLPQERVSGFA 823          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A6G0XLU7_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLU7_9STRA)

HSP 1 Score: 152 bits (385), Expect = 4.320e-40
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0
Query:    4 GAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNP 147
            G+I R+ +HNFLTYAD    PGP+LN+V+GPNG GKSSIVCA+ +GL G+ K LGR++ + DF+ HE++  + E+EL   +  + VV RR+  R+ + S WQ+DG+   +  VKE +A   IQ+DNLC FLPQD+VGDFS  +P
Sbjct:   13 GSIYRIRLHNFLTYADAELYPGPRLNLVIGPNGTGKSSIVCALCVGLGGSTKVLGRADKMGDFVQHEKESGFTEIELFFKK--RNVVIRRNIYRDNR-STWQIDGKDVSQNKVKEMLANSRIQIDNLCQFLPQDKVGDFSRMSP 153          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A7S2LL45_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LL45_9STRA)

HSP 1 Score: 152 bits (384), Expect = 4.840e-40
Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 0
Query:    1 FHTGAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEV-------HEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNPQ 148
            +  G+I RV M NFLTY +V   PGP+LN+V GPNG+GKS+I+CA+ LGL G P  LGR++++  FIMHE++ A +E+EL         H++ KR + R     N   S W ++      K VKE + + G+QVDNLCTFLPQDRVG FSG+  Q
Sbjct:   13 YKPGSILRVKMVNFLTYKEVEVCPGPRLNVVCGPNGSGKSTILCALCLGLGGQPNLLGRADDVKLFIMHEEESAEIEIELAPKDPTQPHHDIIKRHIIRAKGRSNAGASDWYINDEKSSHKEVKELVRSYGVQVDNLCTFLPQDRVGSFSGFTAQ 167          
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Match: A0A3L6VBE6_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VBE6_9STRA)

HSP 1 Score: 148 bits (374), Expect = 6.160e-40
Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 0
Query:    4 GAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGLAGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVKGSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNP 147
            G++ R+ +HNFLTY D    PGP+LN+V+GPNG GKSSIVCA+ +GL G+ K LGR++ + DF+ HE+   + E+EL      + VV RR+  R+ + S WQLDG+   +  V+E ++   IQ+DNLC FLPQD+VGDFS   P
Sbjct:   13 GSVFRIRLHNFLTYGDAELFPGPRLNVVIGPNGTGKSSIVCALCVGLGGSTKVLGRADKMGDFVQHEKDSGFTEIELFF--TRRNVVIRRNIFRDNR-STWQLDGKESTQNKVREVLSKAKIQIDNLCQFLPQDKVGDFSRMTP 153          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|131823 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YL14_9STRA1.330e-105100.00Structural maintenance of chromosomes protein 5 (F... [more]
A0A2D4CGT3_PYTIN2.830e-4452.41Structural maintenance of chromosomes protein 5 n=... [more]
A0A8K0JMX2_9TREE4.190e-4251.72Uncharacterized protein n=2 Tax=Filobasidium flori... [more]
D7FUV3_ECTSI8.940e-4253.10Structural maintenance of chromosomes protein 5 n=... [more]
A0A397EW01_9STRA1.250e-4149.31Structural maintenance of chromosomes protein 5 n=... [more]
A0A2D4C5S1_PYTIN1.700e-4052.41Structural maintenance of chromosomes protein 5 n=... [more]
A0A177WTY8_BATDL3.290e-4052.86Structural maintenance of chromosomes protein 5 n=... [more]
A0A6G0XLU7_9STRA4.320e-4051.39Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S2LL45_9STRA4.840e-4048.39Structural maintenance of chromosomes protein 5 (F... [more]
A0A3L6VBE6_9STRA6.160e-4049.31Structural maintenance of chromosomes protein 5 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..148
e-value: 2.8E-26
score: 94.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..142
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 6..130
e-value: 6.1E-14
score: 52.0
IPR027131Structural maintenance of chromosomes protein 5PANTHERPTHR45916STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5coord: 1..147
NoneNo IPR availableCDDcd03277ABC_SMC5_eukcoord: 4..148
e-value: 1.69763E-44
score: 143.12

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_73contigContig_73:131261..132324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|131823mRNA_12849Tribonema minus UTEX_B_3156 mRNAContig_73 131261..132324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|131823|gw1.73.17.1 ID=Trimin1|131823|gw1.73.17.1|Name=jgi.p|Trimin1|131823|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=148bp
FHTGAITRVAMHNFLTYADVNFKPGPKLNIVMGPNGAGKSSIVCAMVLGL
AGNPKFLGRSENLNDFIMHEQQHAWVEVELEVHEVGKRVVFRRSFERNVK
GSKWQLDGRTHPEKHVKEKIAALGIQVDNLCTFLPQDRVGDFSGYNPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003395RecF/RecN/SMC_N
IPR027131SMC5