Trimin1|131257|gw1.181.3.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|131257
Unique Name	Trimin1\|131257\|gw1.181.3.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	160

Homology

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BLAST of jgi.p|Trimin1|131257 vs. uniprot
Match: A0A836CIX9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX9_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.540e-32
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0

Query:    1 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHVDEGGNSCNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDEQDNSCRASAVLRGCNLETWAH 160
            CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHVDEGGNSCNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDEQDNSCRASAVLRGCNLETWAH
Sbjct:    1 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHVDEGGNSCNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDEQDNSCRASAVLRGCNLETWAH 160

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BLAST of jgi.p|Trimin1|131257 vs. uniprot
Match: A0A836CC28_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC28_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.190e-18
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 0

Query:    1 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHVDEGGNSCNA 41
            CEVNGCTKQAV RSGSTEFCVMH GGDRCQHVDEGGNSCNA
Sbjct:    1 CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQHVDEGGNSCNA 41

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BLAST of jgi.p|Trimin1|131257 vs. uniprot
Match: A0A836CDE9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.510e-13
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0

Query:    1 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH 31
            CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH
Sbjct:    7 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQH 37

[Close]

BLAST of jgi.p|Trimin1|131257 vs. uniprot
Match: A0A836CB44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB44_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.340e-8
Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = 0

Query:    1 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHVDEGGNSCNA 41
            C ++ CTKQAV    +TEFCV HGGGDRCQ++D  GNSC +
Sbjct:    6 CSIDDCTKQAVKGGDATEFCVKHGGGDRCQYIDAEGNSCGS 46

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|131257 vs. uniprot

BLAST of jgi.p|Trimin1|131257 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A836CIX9_9STRA	6.540e-32	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CC28_9STRA	3.190e-18	95.12	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CDE9_9STRA	3.510e-13	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CB44_9STRA	1.340e-8	60.98	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31827:SF40	F22C12.10	coord: 1..139
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 1..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_181	contig	Contig_181:192501..193210 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|131257	mRNA_16074	Tribonema minus UTEX_B_3156	mRNA	Contig_181 192501..193210 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|131257|gw1.181.3.1 ID=Trimin1|131257|gw1.181.3.1|Name=jgi.p|Trimin1|131257|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp
CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHVDEGGNSCNACAKISKSGN
GVVHMCIKHGGGNRCQHVDEEGHSCRASALTSRTGSGAVGMCIKHGGGDR
CQHGGNSCTSSAVASKTGSGAIGMFVKHGGGNRCQHVDEQDNSCRASAVL
RGCNLETWAH