Trimin1|130845|gw1.529.2.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|130845
Unique NameTrimin1|130845|gw1.529.2.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length82
Homology
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: A0A835YW93_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW93_9STRA)

HSP 1 Score: 160 bits (405), Expect = 6.730e-50
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MRQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQKHQEMRAHAPTATEAALS 82
            MRQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQKHQEMRAHAPTATEAALS
Sbjct:    1 MRQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQKHQEMRAHAPTATEAALS 82          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.350e-28
Identity = 57/80 (71.25%), Postives = 69/80 (86.25%), Query Frame = 0
Query:    1 MRQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQKHQEMRAHAPTATEAA 80
            +RQ+SREV QR++L+VLE CY  PLTAAA++L VSNTMLKKLCRRYGIQRWPHRQIRSI+KE+QKH + RA A +A + A
Sbjct:   89 IRQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIA 168          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.380e-18
Identity = 38/67 (56.72%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    2 RQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQKHQE 68
            RQ+S EV++R+ ++VLE  Y++PL  AA++L VS TMLKKLCR+YGI+RWPHRQ+ S++K + K +E
Sbjct:    3 RQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEE 69          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: D7FS12_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS12_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 3.560e-15
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    2 RQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQK 65
            RQ+S +V+ R+ L VLE  Y++PL  AA++L VS TMLKKLCR YG++RWPHRQ+ S+DK   K
Sbjct:  465 RQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSK 528          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.600e-15
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    2 RQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQK 65
            RQ+S +V+ R+ L VLE  Y++PL  AA++L VS TMLKKLCR YG++RWPHRQ+ S+DK   K
Sbjct:  465 RQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSK 528          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI)

HSP 1 Score: 74.7 bits (182), Expect = 5.690e-14
Identity = 34/65 (52.31%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    1 MRQSSREVS-QRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQ 64
            +RQS+ ++  + ++L +L+  YN+PL   AK+L +S T+LKK+CR++GIQRWPHRQIRSI+K +Q
Sbjct:    2 IRQSTTQIEPEEITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQ 66          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.070e-13
Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    9 SQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQKHQEMRAHAPTATEAA 80
            + +++L +L+  YN+PL   AK+L +S T+LKK+CR++GIQRWPHRQIRS++K  Q+ +E    A TA E A
Sbjct:    8 ADQITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHA 79          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: D0NC80_PHYIT (RWP-RK domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NC80_PHYIT)

HSP 1 Score: 70.9 bits (172), Expect = 4.370e-13
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    2 RQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEM 63
            R  S+     V L  L  C+N+P+ A A+K  +  T+LKK+CRRYGIQRWPHRQIRS+ K +
Sbjct:   87 RGGSKRYGPVVQLEDLRECFNMPIAAVARKFGICATLLKKICRRYGIQRWPHRQIRSLQKSI 148          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.860e-13
Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    9 SQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQ 64
            +  ++L +L+  YN+PL   AK+L +S T+LKK+CR+YGIQRWPHRQIRSI+K  Q
Sbjct:   11 ADNITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQ 66          
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Match: A0A2P4Y149_9STRA (RWP-RK domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y149_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.230e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    2 RQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEM 63
            R SS+     V L  L  C+N+P+ A A+K  +  T+LKK+CRR+GIQRWPHRQIRS+ K +
Sbjct:   91 RGSSKRYGPVVQLEDLRQCFNMPIAAVARKFGICATLLKKICRRHGIQRWPHRQIRSLQKSI 152          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|130845 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YW93_9STRA6.730e-50100.00RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
A0A836CMG7_9STRA1.350e-2871.25RWP-RK domain-containing protein n=1 Tax=Tribonema... [more]
A0A835Z7T4_9STRA6.380e-1856.72RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
D7FS12_ECTSI3.560e-1557.81Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5KE17_9PHAE3.600e-1557.81RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
H6WBB7_VAULI5.690e-1452.31Putative NIN-like transcription factor n=1 Tax=Vau... [more]
A0A835YTG3_9STRA4.070e-1350.00Putative NIN-like transcription factor n=1 Tax=Tri... [more]
D0NC80_PHYIT4.370e-1351.61RWP-RK domain-containing protein n=1 Tax=Phytophth... [more]
A0A835Z1M5_9STRA5.860e-1357.14Putative NIN-like transcription factor n=1 Tax=Tri... [more]
A0A2P4Y149_9STRA1.230e-1251.61RWP-RK domain-containing protein n=2 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 12..59
e-value: 1.0E-19
score: 70.2
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 1..79
score: 16.562874
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availablePANTHERPTHR46373:SF2PROTEIN RKD4coord: 8..76
IPR044607Transcription factor RKD-likePANTHERPTHR46373PROTEIN RKD4coord: 8..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_529contigContig_529:9671..9916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|130845mRNA_18995Tribonema minus UTEX_B_3156 mRNAContig_529 9671..9916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|130845|gw1.529.2.1 ID=Trimin1|130845|gw1.529.2.1|Name=jgi.p|Trimin1|130845|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=82bp
MRQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQR
WPHRQIRSIDKEMQKHQEMRAHAPTATEAALS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
IPR044607RKD-like