Trimin1|128875|gw1.71.1.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|128875
Unique NameTrimin1|128875|gw1.71.1.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length83
Homology
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BLAST of jgi.p|Trimin1|128875 vs. uniprot
Match: A0A835YV90_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV90_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.840e-18
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:    1 RNTGLEMAIIDETLKELPEFYGIFTSAQSLIFYRCKALQ 39
            RNTGLEMAIIDETLKELPEFYGIFTSAQSLIFYRCKALQ
Sbjct:    1 RNTGLEMAIIDETLKELPEFYGIFTSAQSLIFYRCKALQ 39
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BLAST of jgi.p|Trimin1|128875 vs. uniprot
Match: A0A835Z6I8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.640e-8
Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    1 RNTGLEMAIIDETLKELPEFYGIFTSAQSLIFYRCKALQ 39
            RN GLE+AI D TLKELPEFYGIFTSA+SL    C+ALQ
Sbjct:    4 RNRGLELAISDATLKELPEFYGIFTSARSLSVAGCEALQ 42
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|128875 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YV90_9STRA1.840e-18100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z6I8_9STRA2.640e-874.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 6..83
e-value: 9.1E-17
score: 62.5
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 14..83
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 19..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_71contigContig_71:184019..184267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|128875mRNA_12381Tribonema minus UTEX_B_3156 mRNAContig_71 184019..184267 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|128875|gw1.71.1.1 ID=Trimin1|128875|gw1.71.1.1|Name=jgi.p|Trimin1|128875|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=83bp
RNTGLEMAIIDETLKELPEFYGIFTSAQSLIFYRCKALQSVPESIGNLTG
LTRLSFNGCNAVQSVPESIGQLTGLKSLDLRRC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf