Trimin1|12018|CE12017_117 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|12018
Unique NameTrimin1|12018|CE12017_117
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length285
Homology
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BLAST of jgi.p|Trimin1|12018 vs. uniprot
Match: A0A836CMT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT3_9STRA)

HSP 1 Score: 569 bits (1466), Expect = 4.790e-205
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0 
Query:    1 MMRAPSLLPMICMAVVVCHCQGFMSARPGFAAGVKAHSALRMAADVHGVVDAAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPESEVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS 284
            MMRAPSLLPMICMAVVVCHCQGFMSARPGFAAGVKAHSALRMAADVHGVVDAAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPESEVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS
Sbjct:    1 MMRAPSLLPMICMAVVVCHCQGFMSARPGFAAGVKAHSALRMAADVHGVVDAAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPESEVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS 284
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BLAST of jgi.p|Trimin1|12018 vs. uniprot
Match: A0A6H5JAD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD8_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 3.530e-64
Identity = 110/234 (47.01%), Postives = 143/234 (61.11%), Query Frame = 0 
Query:   52 AAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPES-EVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS 284
            AAF  +E    L P DHAEAM L+ +     SGTI G+ G KVDW S+ +     G     L  W  PM+DVPHL++ L    + LT + DL+AKDD MY++ Y E YYGG T AW+E+I+ N +     V   L+ R+LASP    V+ P++ E A +   +  +I  +WL +L DA EIARVRRGTMLSRD+ +RR  WAVT  D   GD+ Q+IA  +AGPGDM Y GQ S
Sbjct:   18 AAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGKKVDWVSRCTINEADGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWEAIMQNPNVVPAKVSMDLKERSLASPVHFSVTMPDTAENAAVLGNAAQEIAAIWLGFLDDATEIARVRRGTMLSRDSEVRRTWWAVTGNDKALGDRGQEIAAGMAGPGDMGYTGQAS 251
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|12018 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CMT3_9STRA4.790e-205100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JAD8_9PHAE3.530e-6447.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1500.20coord: 47..272
e-value: 5.6E-20
score: 73.6
IPR009439Red chlorophyll catabolite reductasePFAMPF06405RCC_reductasecoord: 114..253
e-value: 9.8E-6
score: 24.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:750003..760194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|12018mRNA_3772Tribonema minus UTEX_B_3156 mRNAContig_12 749883..760230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|12018|CE12017_117 ID=Trimin1|12018|CE12017_117|Name=jgi.p|Trimin1|12018|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=285bp
MMRAPSLLPMICMAVVVCHCQGFMSARPGFAAGVKAHSALRMAADVHGVV
DAAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKV
STKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTM
YSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVS
GPESEVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMS
WAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009439RCC_reductase