mRNA_3772 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|12018
Unique Name	mRNA_3772
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|12018 vs. uniprot
Match: A0A836CMT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT3_9STRA)

HSP 1 Score: 570 bits (1468), Expect = 1.920e-204
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1

Query:   37 MMRAPSLLPMICMAVVVCHCQGFMSARPGFAAGVKAHSALRMAADVHGVVDAAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPESEVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS 888
            MMRAPSLLPMICMAVVVCHCQGFMSARPGFAAGVKAHSALRMAADVHGVVDAAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPESEVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS
Sbjct:    1 MMRAPSLLPMICMAVVVCHCQGFMSARPGFAAGVKAHSALRMAADVHGVVDAAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPESEVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS 284

[Close]

BLAST of jgi.p|Trimin1|12018 vs. uniprot
Match: A0A6H5JAD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD8_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 2.700e-63
Identity = 110/234 (47.01%), Postives = 143/234 (61.11%), Query Frame = 1

Query:  190 AAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKVSTKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTMYSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVSGPES-EVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMSWAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS 888
            AAF  +E    L P DHAEAM L+ +     SGTI G+ G KVDW S+ +     G     L  W  PM+DVPHL++ L    + LT + DL+AKDD MY++ Y E YYGG T AW+E+I+ N +     V   L+ R+LASP    V+ P++ E A +   +  +I  +WL +L DA EIARVRRGTMLSRD+ +RR  WAVT  D   GD+ Q+IA  +AGPGDM Y GQ S
Sbjct:   18 AAFSMVEQALELSPLDHAEAMGLETWEAAGSSGTIAGFKGKKVDWVSRCTINEADGSTRECLRAWVMPMFDVPHLSITLGSGPNGLTAEMDLVAKDDVMYAKAYREQYYGGPTTAWWEAIMQNPNVVPAKVSMDLKERSLASPVHFSVTMPDTAENAAVLGNAAQEIAAIWLGFLDDATEIARVRRGTMLSRDSEVRRTWWAVTGNDKALGDRGQEIAAGMAGPGDMGYTGQAS 251

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|12018 vs. uniprot

BLAST of jgi.p|Trimin1|12018 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CMT3_9STRA	1.920e-204	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JAD8_9PHAE	2.700e-63	47.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_12	contig	Contig_12:749883..760230 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|12018\|CE12017_117
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2CHM3@1\|root,2T2RF@2759\|Eukaryota
Evalue	1.4e-32
Seed ortholog	2880.D8LIG6
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	Red chlorophyll catabolite reductase
Ec32 ortholog	Ec-18_003740.1
TranscriptId	12340
Track	FilteredModels1
ProteinId	12018

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|12018	gene_3772	Tribonema minus UTEX_B_3156	gene	Contig_12 749883..760230 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3772_11	exon_3772_11	Tribonema minus UTEX_B_3156	exon	Contig_12 749883..750059 -
exon_3772_10	exon_3772_10	Tribonema minus UTEX_B_3156	exon	Contig_12 751028..751076 -
exon_3772_9	exon_3772_9	Tribonema minus UTEX_B_3156	exon	Contig_12 752447..752533 -
exon_3772_8	exon_3772_8	Tribonema minus UTEX_B_3156	exon	Contig_12 753174..753292 -
exon_3772_7	exon_3772_7	Tribonema minus UTEX_B_3156	exon	Contig_12 753805..753888 -
exon_3772_6	exon_3772_6	Tribonema minus UTEX_B_3156	exon	Contig_12 754528..754627 -
exon_3772_5	exon_3772_5	Tribonema minus UTEX_B_3156	exon	Contig_12 755524..755541 -
exon_3772_4	exon_3772_4	Tribonema minus UTEX_B_3156	exon	Contig_12 755877..755938 -
exon_3772_3	exon_3772_3	Tribonema minus UTEX_B_3156	exon	Contig_12 756476..756532 -
exon_3772_2	exon_3772_2	Tribonema minus UTEX_B_3156	exon	Contig_12 758166..758251 -
exon_3772_1	exon_3772_1	Tribonema minus UTEX_B_3156	exon	Contig_12 760059..760230 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_3772	UTR3_3772	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_12 749883..750002 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3772	CDS_3772	Tribonema minus UTEX_B_3156	CDS	Contig_12 760059..760194 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_3772	UTR5_3772	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_12 760195..760230 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|12018	Trimin1\|12018\|CE12017_117	Tribonema minus UTEX_B_3156	polypeptide	Contig_12 750003..760194 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_12:749883..760230-
coding sequence from alignment at Contig_12:749883..760230-

spliced messenger RNA

>mRNA_3772 ID=mRNA_3772|Name=jgi.p|Trimin1|12018|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1011bp|location=Sequence derived from alignment at Contig_12:749883..760230- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAACAGCGAGCCCATTAGAAGCTGCAGCAGGCGCACATGATGAGAGCGCC
ATCCCTTTTGCCGATGATCTGCATGGCTGTGGTCGTGTGCCATTGCCAGG
GCTTCATGAGCGCGAGGCCCGGCTTTGCAGCTGGGGTTAAGGCGCACAGC
GCGCTGCGGATGGCGGCAGACGTGCACGGGGTGGTGGACGCAGCGTTCAA
GAAGATAGAGGCGGACCAGGCGCTGCGACCGAGCGATCACGCGGAGGCGA
TGGAGCTGGACGCCTTCACGGTGGGCGACGTGTCCGGCACCATCGAGGGC
TACCTGGGCACAAAGGTGGACTGGTGCAGCAAGGTCAGCACCAAGGGGCC
CGGCGGGGACGCGTCGTACGCGCTCAGCTGCTGGACATTCCCCATGTACG
ACGTGCCCCACCTGACGGTGGCGCTCAGCAAGAGTGGCGACACGTTGACG
CTCAAGGCGGACCTCATCGCGAAGGACGACACCATGTACTCGCAGGACTA
CCTAGAGAGCTACTACGGCGGGGAGACACTGGCGTGGTACGAGTCCATCG
TCGGCAACGCACACACCACCTCGCTGCCGGTGCCGGCGACGCTGCGCGGC
CGCGCGCTCGCGTCGCCGGGCCTGGTCCACGTTTCGGGCCCGGAGAGCGA
GGTCGCGGAGCTGTTCGCGGCGAGTGTCGATAAAATCACCGACATGTGGC
TGGCGTGGCTCGCGGACGCAGCCGAGATTGCGCGCGTGCGCCGCGGCACC
ATGCTCTCCCGGGACAACATCCTGCGCCGCATGAGCTGGGCGGTTACCTG
CAAGGACCCCATGTTCGGGGACCAGAGCCAACAGATCGCCACTGCCATCG
CGGGGCCTGGCGACATGGCGTACGTTGGCCAGTACAGCTGAGCTGTACAG
TACAGGGGTGTACCCTTGTGTACTCACATGACGTGACCAAGATTCGTACC
TGAAGTGCTTTATCAAGAGCTTACAAGTGTTATGAAGAATACATGAGGTG
TCACATTTGCC

protein sequence of jgi.p|Trimin1|12018

>Trimin1|12018|CE12017_117 ID=Trimin1|12018|CE12017_117|Name=jgi.p|Trimin1|12018|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=285bp
MMRAPSLLPMICMAVVVCHCQGFMSARPGFAAGVKAHSALRMAADVHGVV
DAAFKKIEADQALRPSDHAEAMELDAFTVGDVSGTIEGYLGTKVDWCSKV
STKGPGGDASYALSCWTFPMYDVPHLTVALSKSGDTLTLKADLIAKDDTM
YSQDYLESYYGGETLAWYESIVGNAHTTSLPVPATLRGRALASPGLVHVS
GPESEVAELFAASVDKITDMWLAWLADAAEIARVRRGTMLSRDNILRRMS
WAVTCKDPMFGDQSQQIATAIAGPGDMAYVGQYS*

mRNA from alignment at Contig_12:749883..760230-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3772 ID=mRNA_3772|Name=jgi.p|Trimin1|12018|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10348bp|location=Sequence derived from alignment at Contig_12:749883..760230- (Tribonema minus UTEX_B_3156 )
AAACAGCGAGCCCATTAGAAGCTGCAGCAGGCGCACATGATGAGAGCGCC
ATCCCTTTTGCCGATGATCTGCATGGCTGTGGTCGTGTGCCATTGCCAGG
GCTTCATGAGCGCGAGGCCCGGCTTTGCAGCTGGGGTTAAGGCGCACAGC
GCGCTGCGGATGGCGGCAGACGGTGCGTACTCCTCGAAAAATACTTGCTG
ATGCCGTGCAAGTTTTGTGCTGGTCTTGTAGCTTGCGGCTATGAATGCGG
TCATGGATGGCAGACTACCTCGAGGAGATCGGTTTGACGATGCGCCGTGT
GTAAGCTACATGTCAAAACCATCCTAAGTAGTGAAACAGAGCATTGCAAT
TTGTTTGGGCGTTTGATTACCTGATTTGGGCACTTTATCACATGGCCCCA
TCCCCCTAGTCACTGCTTCTACTGTACGCCGGGACACCGACATGCTGATT
GTCTTTGAAGCAAACAGTGCTCTCGTCTGCGCTCGCCTCACTCAATTCGC
AAGCCAATGTTATCAGGCTCCTCCTTGCCAACAAAAGGCAAGCACAGAAA
AGAAAACAGTATATCCGCGCGGGCAGCGTCGAGTCTCAAGGCAGTTTGCA
GCACATCGCTACAAGGTAGTGTGCAGCCTGCCAAGCAGAACCTGTTGCAC
ACAGATTGCAGATGCAGGGAGCAGCAGTAACATCGTCGCCACGTGCAGTG
CCTGCACGCATTGTGGCATATTTTCTGCAACGGCCACATAGGGGGGGACA
GGACTACCTTGGAACGAGTGACAGCACCCATCACATCGGTGAAGAACTTG
ACAGAGCGCTTTGCAAACTAGGCATCCTTCGCGTTGAGCAAAGCCTTCTC
AAGGCGCACAGCTCGTGAGCACGGTGCACAATTCACATCGCCTGTTGCAT
TGTGGAAAAAGCATTTCAGCGTGTAAAGTTCTGAGTGCAGAGCGGCTCTC
GTGCAACAAAGAAGCTGCTGACTGCATTGCAGCGCGCAGTGGCAAGAACT
CAGCGCATCATGCGTCGTTTTCACGCGCAGCGCGTGTGAATTGAGGCCAC
TGTGCATCAAAACAACTGCGGTGCGTGGAGTCTGTAAGCCTGTTGACGTG
AGCTCATGCATCTCAACGGTGCAATCACGCACTGTTGCTCTGACCGCGTC
AGCGGACGAGGCCGATACCGGGATTCAGCTTGGGCGGGGTTCATGACATA
CACACCCGCTGCAGTAAAACACATGAGACTAGCAGTGGCCATGCCTGGCT
TTGGGTTAGGGCTGGGCTTGGTGCGCTTTGAGGCGCGACGCCTGGGCTTC
TCAGCCGTGGCTACACACATTAGGGTACTTCTTGAAACAGGCGGGGTCTG
GGGTAAGCGTATACAGCGGTCACGTTTGTTCTTCGATGAGCGAACGAAGG
AGCTTATCGTGTGCACATGGTTCACCAGGATTCGCCCCCCCCCCCCCCCC
TTCTTCACCTCCCAACGCCACGCCAACTTTGAACTGCCTCTGCAGCTCTG
AGCTGTCAGTTCGCTGCCCCCGAATGTGCGCGCGCGTGCAGTCAGCGCCT
CCATGCGCGTGCCGCCCGGAATGCGTCTGTTGTACCGCGCGACCGCACTG
CTGAAATCGCGCTCTCGATGCGCGCAACTCACTGGCTAGAGTTGCTCGTC
CAGGTCTTCGAATGCTGACCAGAGGAGCTGCTGCGATGGAAGGCAGCTTG
GACTATGCACACTCTTGACGCGCAGGTTGGGGCGTCGCTCACGTGTCCGC
GGCTCCCGGCCAAGCACGAACTTCACGTTTCGCGCTCGCAACGACGCAGA
CTTGATGGCGGGCGGCGCTTTCTCGACACGCACCAGTCACAGCGCCGCAC
ACATCCGTTGCTCCAATGAAAGGAGATGCGCTTGGCGTTCACGATTGCGC
ACTTGTGCGTGGCTCCCGCCTCGCGCCCCCTCGCCTGACCCTGCTCCTAA
CCCTGACCCCATGCTCCCGAGGCGCGCAGTGCACGGGGTGGTGGACGCAG
CGTTCAAGAAGATAGAGGCGGACCAGGCGCTGCGACCGAGCGATCACGCG
GAGGCGATGGAGCTGGTGAGGGTTGCAGTCATATAGGGGTTGAAGTTCCG
TGCGCAGCAGGATCAGATGGGGGTAGGGGAGGGTTTGGGTGAGGGGGATA
GAGGTAGGGCTACAGCGACAAGCGGAGGCATGGAGCTGGTGAGGATGAGA
GTCATGTATAGGGTTGGGGTTACGTGTATGTCAGGATCAGACGGGGACTA
GGGTCGGCTGAATTAGGGTTGGGCGAGGGGTAGGGTTAGGGCTACGACCG
AGCGACCGCGCTGAGAAGCTGGTGAGGAGTGCTGCATGTAGGGTTAGGGT
CAGGAGCGGAGTTAGGTTCTGGTAAGGGCTAGCGTTAGGCGAGGGTCAGG
GTTACGGTTGAAATCATGTGATCCTGCTGAGGCCACGGAGCTGGCTGAGG
CTCAGGGTTAGGTTGTAAAGAGGGTCAGTCAAAAGTAAGGGTTAGGGTCA
CATCATCCTGTGCGGAGGGCCTCTGTCGGGTCGACGCCACTCGTTTTGAC
AGGCCGCTCGCTCACCGGCAGCAGGTGCGCAAATGTTGTTGTCAGGACTG
CACGCGGCGCGCGCGGCGCAGCAGATGATTCGCGCGCGGACCCTGCATCA
ACTCGCCCGCAGGCGAGTCCATCATATGCATGCGCGGCATCGCGTGTGTC
ATGCCCGGGAGCTGATGAGGCGCGCCATGCGCCAGTAGCATGGCATCCAG
TTGCATTGTTCTTAGGGTTAGGTCAGAGTTAGGGTAAGGTTAAGGTGACT
GCGCGTGTGACAGTGGGCCGCTAGCACGTGACCGACGCTATCTAGGTTCT
AGGTCATCCATTGCCAGCGGCTGCGCCAGACTGCGAACCGACTGCGGCAG
CGATCGAGCCCCCGCAACGTGCATGCATAACGCCATGTGTCGGAGTGCAC
GCGACTGCGCAAGGGCGCTGAGGCGCGTGATGCTCACCGCGGCATTACTC
GCACATGCCGGTAATGGCACCGGACGGGTACCACCCATGGGGTAGGTATG
ACTACCACAGGGTATGGTGAAGAGTGGGGTATGTATACAAAGTAGTGCTC
CCGTGCTCTGCTGCCCAGTGCTCAGCGGCTGGTGCGATGGTGTGCACGGC
GGTGCAAGCGAGGTGCTTCTTCCACATAGGTAATCAAAGGGAAGGAAGAA
AGGGTATACCAAAGAGTGCACTTCAAGCATGGGCTTTGACGTTCGGGTCT
GCCCGTGCTTTGAAGCACAGCACAGAGGAATACATGTCCAACTATGATTC
ATGCTGTGAGCAATTGCACTTCAAGAAGTGGACTCTCCAGCGCAGCGCGT
TGGCAGAAATGCCAGCAGAGACGGCGAGGTAGGTACTGTAGCAGCCCACA
GCAAGCTTGCGCAAACCACGGCACGCGGCGTCAATCTTTCATGATGTAGT
TTACTTGCAAGTAGATCACTGCGCCGTGCCGCCCCTGCTCAGCGCGCGCG
CAAATGTAAACAGTGTACTGTTTGACTCGTGGCCAATGGCTGCAGCAGCG
GCGACCACGGACCTTAGTGGAAGGCATTCAATCTAACGGCTAACCACGCC
TTGTCACCTAAGCAGAGCTCTACGATGTTTCAATTCGTTTCCACTAAACA
CAGCAACGCCCCCTGCCGCTCCCCCCTTCGTCCGCTGCAACGGCGCAGGA
CGCCTTCACGGTGGGCGACGTGTCCGGCACCATCGAGGGCTACCTGGGCA
CAAAGGTGAGAGGCGGGCGCCTACTGCAGTTCGTACTTTACGCGTGTACT
TCAAGTTGTACTGCAAGTGGTACGGTACTTGAAAACCGAACCCTAAGCCT
CTTCCCAACCCTCGGCAATCAATGAATTCCACCTCTGCTGTGGTGCACTG
GCCTTGGACAGTGTGCGCTGCTGCGCCTCCTCGCAAGCGACTCTCTAGCT
CAGGTGTAGGGTAAGGGTTAGGGTTGGGGTCACGTTTACCATTCGCTACG
GTCATATCAAGTCGAAATGGCTGTGGAGACGCGAGAGCCACTACTGGAGC
ATGCAAGTGTACTGTCGCCCGTCGCCGTACGCGCTGCTTGCGTTGGTTGC
TGCTGCATCACTCGCGTAATCGCCAGTCACTGAATGTTCAATTTACTGGT
TATGGGAAGCGTCTGCTGCAGCCTCGCCCGCACGCAAAACGCAGTCACTT
GGCAGTTGGCAGCAACGCGGATTGCCGTTTGTGCAGACTGCTCGCTGCTG
CTCTTGCTGATCGCTGCCCCCGTGACGTCGCGGTTGCCTCAGGTGGACTG
GTGCAGCAAGGTCAGCACCAAGGGGCCCGGCGGGGACGCGTCGTACGCGC
TCAGGTGAGCCCCAGGTCTAGGGTTTGAAGCCTTAGGGCTAGGGCTGGCC
GTTGTTTTGCTGTGCACCGTAGCATCGCTGACCTAGGGTTAGGGTCATGA
GCGTGTGCACACCTGCTGCAGGCACTGTTGTTGTGTTCAGCAATCGTGTC
ACGGGCGGAGGAAGACCTGTTATTACCGATATTTTCAACAATCAGCGCGT
TCCTTGAGCTGACTTGAGCTGACAATCGTGTGCTGCGCCCCGTTCGCTGT
CGCGCCCCCCCCCCCCCCCCCCAACCCCCCCATGTGCGTGCGTCGCTCCC
GCGAAACCCCTGGTGCCCCCGTCTTCCGCGCGCCTGCAGCTGCTGGACAT
TCCCCATGTGAGTGACTGCTCTATTAGGGTTAGGTTACGGATAACCCAAA
CCCTAACCCTAGCCATGTTCAGACGCATGCCGTCTCAAATGCCTGGAAGT
GTGTGCATCATGCCAACTGTAGGTATGCATGTGTGTCGGCGGCCGATCCG
CACCATCTCGCTCAGCGCGCTGGCCGTGCATTTGCGTGCGCGCCGCGCGG
TTCTTGGCGGTGGCGGCACCCCAGTGTTGCTGCCGTGCAGTAGTTTCGCT
GCGGTACATGATGGAGCGGTGACCAGCCACAGCAGTGCAGCTGCTCTGAG
CGCCTGCATCAGTCGGTAGGCGTGCCCTCGTGCCGCCCGGCAGCGGTATA
ATCAGGGTCGCGTTCAAGGTCTGGAGAAGGGCAAGTGTTAGGGGCGATGT
CAGTATATGGGTGCCTTGTTGCGGCTTGTGCGTTGGTGTCGCCCCTGACT
CACGCTCGAAGCTCGGCTGCCGAGCTGTGCCTTTCTGAGGCTTGCTGCAG
ATGTTCTAGCCCTTATCCCGCCCGCACCTCTGCGTGGATGCACAAGAGGC
TTGCGAGGCCTAGAGAGTGCAGGTGCGGCCTGTCAATGAGTCTCTGCTAA
TCCTAACCCTAACCTCACCTACCAGTAATGGGGGGGCAAAATCGGTCCAC
ACCATGTGAGAGACATGATCTCAGACCGTGACATGAGGGGTCACGCAAGA
AGCAAGCTTCTGGCTGCCTTCATACCGCATGACCACGCCCACCATCACAG
GTCACTTTGAGTAGTCATGTGCGTGGTTGCGGCCCATTGGAGCACGCCCG
ATTCCATGCATCGAGACCTGAAATCTACCCCTGACGACGCGAGCTCACGC
GCGTGCTGACGAGACCACACCTGGCCGTCTCTTCAACTTGACGACAACTT
CAGGTACGACGTGCCCCACCTGACGGTGGCGCTCAGCAAGAGTGGCGACA
CGTTGACGCTCAAGGCGGACCTCATCGCGAAGGACGACACCATGTACTCG
CAGGTAAGCGCCATTCCATACCGCTTTCTTGGGGTCATGCGTTCTGCTGT
CAATGACCTGCAAACCACTTCAACAACACACAGTGGTGATGCTCAAGGCG
GACCTCATCGCCACGGACGACACCATGTACGTGCAGTGCGGGTAAGAGCC
ATTCCATACCGCTTTTTTGGGGTCATGAGTGCTGCTGTCGATTGCGCGCA
AGGAACCCCAATGACACACGAAGATGACGCTCCATGCAGACTTCAATCGC
CAAGGACGACACCACAGGTTCATCCGGGGCATCTGCTTGCGAAGAAGGGC
ATGTGCGCTCCTGTCAGCTTTGGGTTAGGGTTAAGGTTAGGCTCCTGTCA
GCCGTATCCCCTTGAAGGGCCCCCAGACGTCCGCGTGAACGTCACCAGTC
CCATCACGTCTTACGCCCCTGTACCTAATTCACACGACAGTTCAAGCAAA
AGTGAGCCGTGCAGAGTGGGCCCAACACTCGGCAGCTCCGCGTCCATTGA
AGTTGAAGCGCACTTTTTGAAGTCAAACGTGAGTTTGCATGCTTTCACCC
CTTCTAACTTGACCGCACCCCCTGCTTCTGCCCCTACGCGCCCCGCACCC
GTGCTAACTCCCCCCCCCCCCCCCCCCCCCCCCCCCCAATAGGACTACCT
AGAGAGCTACTACGGCGGGGAGACACTGGCGTGGTACGAGTCCATCGTCG
GCAACGCACACACCACCTCGCTGCCGGTGAGCGCTGTGCCCTCTGCTGAG
CGTTGTATCATGCCTTCGATTAGTGTTAGGGTTTGGGCTGGAGTCAGGGT
TAGGCCTGTGGATTATGGACGAGTTGTGGTCCGGAAGCGATACACGAGGG
AAAGAGAGGTACAAGTCCATCGTCGCCAACGCGCACACCACCTCGCTGCC
GGTGAGCGCTGTGCTGTGCCTTGCGCTGAGCGTTGTCACGTGATGAGGCA
GATTTCAATTTGAGTTAGGGCCAGGGGGCTAGAGTTACGGTTAGAGTTGC
GGTTTGGTTCTAGAGTACAAGCTGTGCTTTGGAAGCAATTGAATGAGCGT
TAGAGCGGTAGTAGAAGTCCATCATCGGCGCCGCATACACCACCTTGCTG
CCAATGAGCACTGTGCCCTGCGCTGAGCATGATGAAACAACGTGCCGCTA
GAGTTGGGGTGAAGCGTGCATCTCTGCGCTGGTGACTCACGAGCCAGCGC
ATGTCTGCGTTGTGTATTGTCACTTGTGTCGACGGCAGGTGCCGGCGACG
CTGCGCGGCCGCGCGCTCGCGTCGCCGGGCCTGGTCCACGTTTCGGGCCC
GGAGAGCGAGGTCGCGGAGCTGTTCGCGGCGAGTGTCGATAAAATCACCG
ACATGTGGTGAGTCACTGTAAAAGTCATTGTAAAAAAACATGACTCACCA
CATGAACAAATGTTCTTTCCAGTGTTTGTGTGATCTTAATACTTCATTGT
CATACTTCTACAAACATTTCATGACAATGCCCGGGCCCGGAGAGCGAGGT
CGCGGAGCTGTTCGCGGTGAGCGTCGATAAAATCACCGACATGTGGTGAG
TCATTGTTATAGGCCATTGTGAAACAAAAAGACTCACCGCATGAAAGATT
GTGTTTGTGTAGTTTTGAAATATTCCACGACAGTGCAAGGGCCCCGTGGG
TGGCTGTTTGCGCATCACCGATATGTGGTCAGCCGCTTTGCATCTTGTAC
CATTCGTGGCGAGCCGTGTTCGATTTTCATGACAATGCAGTCATCTCAGA
CAGACTGCGCTACTTGGCAAGGCCAGCACTAGAGCGGCAGGTTACCAGAC
TGTACTGTGCTGCACGGCACAGAGTCGTACGATACTTGTAGGGAGTTGTG
CTCTGCACTGCCGCCTGCAGTGCGCGCGCCATTCGCCCTACAAACACGCG
CGCGCGCTGAGCACTGCGCGCGTGTGACGCCCCTCGCTCACACACGCACA
AGCCCTGAGCGCTGACACAATCTGTGCGCTGCGCGCGCGCGCCGCAGGCT
GGCGTGGCTCGCGGACGCAGCCGAGATTGCGCGCGTGCGCCGCGGCACCA
TGCTCTCCCGGGACAACATCCTGCGCCGCATGAGGTACGCAGGATCACAG
CCGCCGTGCCCTGCAGAGGCTTCGACATAATAGTATACAGGTGACGCTGC
AGAGAAGGCAGTATTACGGACGCCGTGCCCTGCATGCTCTTGGACATGAT
GGCATACGTGTGATGCTGCAGAGTAGAATAACTCTGCTGATGCGTGGTAG
CCGGGCGTTTGCACGTCCGGCACCATGCGGGGTGGGCCCCCTGCGGAAAG
GGGGTTAGGGCCAGAGTTAGGATTGGAGAGGCCTCGGGGTCATGGCATGG
GTCATGCGTCGTGTGGTACGTGGCGGCACGCGCGTAATGCTGCAGAGTAC
GATTACAGCCCGCCGTACTCTGTACACCCTGGGAAGTGGTAGCGTGCAGG
CGATGCTGCGGAGGAGGTGCCAGCGTCAGGGCGTGCGGTGCCGTATGTAT
TGCTATCCTGCGCCGCATGGGGTATGTATGACCATGGCCGCCATGCCCCA
TGTACCCTTGCCCACCTTCATAGCATGCAGTTCATTGTTGCAGTTCAAGG
TGCCGCGAGCGTGCATGCACTTCAAACACGCGCGCCCTGGCTGCGCCTGC
GTCCATGGCGTGGTCGTGTGTGCGCGCGCGCGGCGGCACCATCCCCTGTA
ACTACCGCTGCGGTGAGGAGGAGCGGCAGCGGCAGCGAGCAGCGCGTAAT
GTCCCGGCGCGCTCAAGAGGCCACGAGCATTTTCGACCATCGCACGCGCG
CCTCGCAGCTCTCACTGTTGGACCGTCTGGATTGTGGCACACAAGCAAGC
AACAAGCAACCTGTGCAGCAATACTTCCCGAAAGCACACAAGTGTGAGGA
GGGATGCGCCAGGCGGCTGGATTGCCCCACACATAAGGCCACACTTAGGG
TTAGCTAACCCTAACCCTAAGTCAGAACCGCAAACGAGCGCGGACTCTTT
GGACCCAGCTAGCAGTCTTTCACGCAGGGACGTACCGTCAGGCGATGCTA
TTGCTGGCGGCGGCGCTGACGCCGGCGCCGGCGTCCGATCCTGCGGAGGC
GCGCTGCTGCGCTCACCGCTGCGACGGTGGTGCCGCGAGGCTCGCCTGCT
TGCTGGTGGGCGTCCGCAGGCATGCGTCCTCGTGCATGCGTGCCTGCGGA
CCCGAGCGTACCTGAGCGCGCGTCATTCAAGCGTAAGGTGGCTCAACGCT
GCATGTACAGTTCGGACTAGGTACCCTCACCGTCTGCTGGCTCCGGCGCT
GGCGAGCTGCGCGAGTTGCGCCCGTCTCGCTGAAAATATACGCTTGATGT
GTGCGATGCGCATTGAGGTCAGGGTTACAGGTTACGGTCAGAATCAAACC
TCATGCCCCTCTTTCTTCTTTTTTTCTCATTCGCCCGCTCCTCGCCCGCC
GCAGCTGGGCGGTTACCTGCAAGGACCCCATGTTCGGGGACCAGAGCCAA
CAGGTCAGTACAAGTCCCAGCAGAGTACCCTATGCTGTTCTTGACTGTAG
TAGTTGCCAGCAGGAGCGCAACATGCGGCGGCGGCTGAGACCTTCCTAAA
TAGCGCTCCAAGCGCGGTGCATTGATTATTGTATGGGAGCCCTTCATGTG
CTGAGCACACACGGCTTGGTGTCTCTGGCATTGGGCGGTGCTTTCCTGGC
TCCAGCCACAGGTATTCAGCTGGAGTGGGCAAACTGTACCAACGAGGCTC
GCACGGGCATACTCTGTCAGCAATTCAAAGGATCGGGCGCACTATTTCAG
TAATTCAAAGGATCGGTGTGAAGTTCTGAGTGTGCAGACTGTCTCGCTGT
GTACCACCCTGTTTGGCAAAACTCAGCATGTCCATCCAGCGCGTCCGGGA
TCGAACACGCAACCGGTTTGCGCTTGCTGCAGCATTTTCGCCTGCAGTGC
CAGTAACAGCAGGAAAGTGCTGCGACTGTCTGTGATGCCCCTCCCCTCAC
CAGCTTCCAGCTGCTTGGTAGTGCCAGCAATGATATACAAATGGGATCAT
CAACTCGGATGCCAGTAAAATCTTGATCGCGTGGCTAGCAAAAACCGAAA
CGGGGGGGGGGGGGGTCTTGTACTCTGATGTTAAGCCCCCCCCCCCCCTG
ACTGCCATGCCTGTTTGGCCCATAACTGGTTACGTGTTGATATGTTAGTG
ATGATGCATCTGACTTTAACCACACAATGCCCTGCAACTCAATCACCTTT
TTTACAGTACGAGTATGCGGTAGGGATTCAGGATGACTCGAGCAAACACG
TCAGTGCCTGGTGTACGTTTTTGGCACGCATTGGCGTGCACGCGCTGCGT
GTGCTGTCCCTGCTAGCCAGTGACCTCAGATGAGCTGCTGCCATTACATG
CGCACCTGCTGACATTGCTGCCATCTGCCACTTCTGCTCCTGCTGCCGCC
GCTTCTCTCGTGGGCCCACAGATCGCCACTGCCATCGCGGGGCCTGGCGA
CATGGCGTACGTTGGCCAGTACAGCTGAGCTGTACAGTACAGGGGTGTAC
CCTTGTGTACTCACATGACGTGACCAAGATTCGTACCTGAAGTGCTTTAT
CAAGAGCTTACAAGTGTTATGAAGAATACATGAGGTGTCACATTTGCC

Coding sequence (CDS) from alignment at Contig_12:749883..760230-

>mRNA_3772 ID=mRNA_3772|Name=jgi.p|Trimin1|12018|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=855bp|location=Sequence derived from alignment at Contig_12:749883..760230- (Tribonema minus UTEX_B_3156 )
ATGATGAGAGCGCCATCCCTTTTGCCGATGATCTGCATGGCTGTGGTCGT
GTGCCATTGCCAGGGCTTCATGAGCGCGAGGCCCGGCTTTGCAGCTGGGG
TTAAGGCGCACAGCGCGCTGCGGATGGCGGCAGACGTGCACGGGGTGGTG
GACGCAGCGTTCAAGAAGATAGAGGCGGACCAGGCGCTGCGACCGAGCGA
TCACGCGGAGGCGATGGAGCTGGACGCCTTCACGGTGGGCGACGTGTCCG
GCACCATCGAGGGCTACCTGGGCACAAAGGTGGACTGGTGCAGCAAGGTC
AGCACCAAGGGGCCCGGCGGGGACGCGTCGTACGCGCTCAGCTGCTGGAC
ATTCCCCATGTACGACGTGCCCCACCTGACGGTGGCGCTCAGCAAGAGTG
GCGACACGTTGACGCTCAAGGCGGACCTCATCGCGAAGGACGACACCATG
TACTCGCAGGACTACCTAGAGAGCTACTACGGCGGGGAGACACTGGCGTG
GTACGAGTCCATCGTCGGCAACGCACACACCACCTCGCTGCCGGTGCCGG
CGACGCTGCGCGGCCGCGCGCTCGCGTCGCCGGGCCTGGTCCACGTTTCG
GGCCCGGAGAGCGAGGTCGCGGAGCTGTTCGCGGCGAGTGTCGATAAAAT
CACCGACATGTGGCTGGCGTGGCTCGCGGACGCAGCCGAGATTGCGCGCG
TGCGCCGCGGCACCATGCTCTCCCGGGACAACATCCTGCGCCGCATGAGC
TGGGCGGTTACCTGCAAGGACCCCATGTTCGGGGACCAGAGCCAACAGAT
CGCCACTGCCATCGCGGGGCCTGGCGACATGGCGTACGTTGGCCAGTACA
GCTGA