mRNA_9982 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|75049
Unique NamemRNA_9982
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A836CCX2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX2_9STRA)

HSP 1 Score: 525 bits (1352), Expect = 4.050e-186
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1
Query:    1 PSETDKSFDWDGGVEPALRPQYSEKIKDGLRRELGQHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGSSMPQQLEEPRRVKPKLDGQRTAADATLTREQFFWKQMSIIRADEDDVACLRDVDDFGGKPYPDGVPYHW 753
            PSETDKSFDWDGGVEPALRPQYSEKIKDGLRRELGQHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGSSMPQQLEEPRRVKPKLDGQRTAADATLTREQFFWKQMSIIRADEDDVACLRDVDDFGGKPYPDGVPYHW
Sbjct:  112 PSETDKSFDWDGGVEPALRPQYSEKIKDGLRRELGQHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGSSMPQQLEEPRRVKPKLDGQRTAADATLTREQFFWKQMSIIRADEDDVACLRDVDDFGGKPYPDGVPYHW 362          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A835ZJ20_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ20_9STRA)

HSP 1 Score: 452 bits (1162), Expect = 4.180e-156
Identity = 213/251 (84.86%), Postives = 236/251 (94.02%), Query Frame = 1
Query:    1 PSETDKSFDWDGGVEPALRPQYSEKIKDGLRRELGQHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGSSMPQQLEEPRRVKPKLDGQRTAADATLTREQFFWKQMSIIRADEDDVACLRDVDDFGGKPYPDGVPYHW 753
            P ETD+SFDWDGGVEPALRPQYSE+IK+GLRRELGQHQFPRDL+WIDARNITLRKH+NGVLFPVSSRND+LLIV+D++GTPQNGAILGVELKKRLTWQGLRQAETEFI+WQ ESNYPFCQM TDLN G VAF+ALPGDGSGLRIMY VLPSM +VW FMGG+V GLDVAALT+VLR+DAPGSS+PQQLE+PRRVKP+LDG+ TAADA LTREQ FWKQ+S  RA+EDDVACL+D+D FGGKPYPDGVPYHW
Sbjct:  186 PPETDESFDWDGGVEPALRPQYSEEIKNGLRRELGQHQFPRDLLWIDARNITLRKHINGVLFPVSSRNDELLIVRDFYGTPQNGAILGVELKKRLTWQGLRQAETEFILWQGESNYPFCQMATDLNAG-VAFFALPGDGSGLRIMYTVLPSMKDVWGFMGGVVRGLDVAALTSVLRVDAPGSSLPQQLEQPRRVKPRLDGRPTAADAMLTREQLFWKQISTERANEDDVACLQDLDIFGGKPYPDGVPYHW 435          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A836CMP2_9STRA (Uncharacterized protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP2_9STRA)

HSP 1 Score: 451 bits (1159), Expect = 2.520e-155
Identity = 210/251 (83.67%), Postives = 233/251 (92.83%), Query Frame = 1
Query:    1 PSETDKSFDWDGGVEPALRPQYSEKIKDGLRRELGQHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGSSMPQQLEEPRRVKPKLDGQRTAADATLTREQFFWKQMSIIRADEDDVACLRDVDDFGGKPYPDGVPYHW 753
            PSETD+ FDWDGG+EPAL PQYSE+IK GL  ELGQ Q PRDLVWIDARNITL+KH+NGVLFPVS+RND+LLIV+D++GTPQNGAILGVELKKRLTWQG+RQAETEFI+WQAESNYPFCQM+TDLNTGGVAF+ALPGDGSGLRIMY VLPSM EVWRFMGGLV GLDVAALT VLR+DAPGSS+PQQLEEPRRVKP+LDGQ  AADA LTREQ  WKQ+SI+RA+E+DVACL+D+ DFG KPYPDGVPYHW
Sbjct:  207 PSETDEFFDWDGGIEPALHPQYSEEIKKGLWHELGQRQLPRDLVWIDARNITLKKHINGVLFPVSTRNDELLIVRDFYGTPQNGAILGVELKKRLTWQGIRQAETEFILWQAESNYPFCQMVTDLNTGGVAFFALPGDGSGLRIMYMVLPSMAEVWRFMGGLVRGLDVAALTTVLRVDAPGSSLPQQLEEPRRVKPRLDGQPAAADARLTREQLLWKQISIMRANENDVACLQDLADFGDKPYPDGVPYHW 457          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A836CLL8_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL8_9STRA)

HSP 1 Score: 439 bits (1130), Expect = 3.620e-154
Identity = 207/241 (85.89%), Postives = 229/241 (95.02%), Query Frame = 1
Query:   31 DGGVEPALRPQYSEKIKDGLRRELGQHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGSSMPQQLEEPRRVKPKLDGQRTAADATLTREQFFWKQMSIIRADEDDVACLRDVDDFGGKPYPDGVPYHW 753
            DGGVEPALRPQYSE+IK+GLRRELGQHQFPRDL+WIDARNITLRKHVNGVLFPVSSRND+LLIV++++GTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQM+TDLN GGVAF+ALPGDGSGLRIMY VLPSM +VW FM GLV GLDVAALT+VLR+DAPGSS+PQQLE+PRRVKP+LDG+ +AADA LTREQ FWKQ+S  RA+EDDVACL+D+D FGGKPYPDGVPYHW
Sbjct:    4 DGGVEPALRPQYSEEIKNGLRRELGQHQFPRDLLWIDARNITLRKHVNGVLFPVSSRNDELLIVRNFYGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMVTDLNAGGVAFFALPGDGSGLRIMYTVLPSMKDVWGFMEGLVRGLDVAALTSVLRVDAPGSSLPQQLEQPRRVKPRLDGRPSAADAMLTREQLFWKQISTERANEDDVACLQDLDIFGGKPYPDGVPYHW 244          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A835YWP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP1_9STRA)

HSP 1 Score: 245 bits (625), Expect = 5.900e-75
Identity = 124/236 (52.54%), Postives = 161/236 (68.22%), Query Frame = 1
Query:   34 GGVEPALRPQYSEKIKDGLRRELGQHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGSSMPQQLEEPRRVKPKLDGQRTAAD-ATLTREQFFWKQMSIIRADEDDVACLRDVDDFGGKPYPDG 738
            G  +P LR   S++++ GL+ +LG+   PR+L WIDARN TL K V+G+ + VS+ ND +LIV+D+ G P+ GAIL V LK++LTWQG+ Q E +FI+WQA SNYPFCQ++TD +TGGVAF+A P  GSG RI Y VL +M  VW F+  LV  L++ ALTA LR +    S PQQLE PRR+K +LDG    A+   LTRE  FWK +S  RADE DV CL+D+  F      DG
Sbjct:   25 GSAQPPLRIDLSQRVRQGLQLKLGR-DLPRELAWIDARNTTLEKRVHGLAYSVSANNDDVLIVRDFSGMPEYGAILAVGLKEKLTWQGMLQTEAQFILWQAVSNYPFCQLMTDPSTGGVAFFASPDAGSGARIRYMVLRTMDHVWDFLSELVHALEIHALTAPLRPNVADCSTPQQLELPRRIKRRLDGPPDPANRGGLTREHVFWKLLSAARADETDVGCLQDLAAFEEPATEDG 259          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A150G7X1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7X1_GONPE)

HSP 1 Score: 168 bits (426), Expect = 1.340e-47
Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 1
Query:   40 VEPALRPQYSEKIKDGLRREL-GQH-QFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSG-LRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDA-PG--SSMPQQLEEPRRVKPKLDGQRTAADAT---LTREQFFWKQMSIIRADEDDVACLRDVDDF 714
            +E + R    ++IK+G+ ++  G H Q  R + W   R  T++  + G+ F VS +ND++L VK + GT + GA+LGVELKK+LTWQGLRQAETEF +WQ  S YPFCQ+ITDL TGG A+Y+   D  G +R++ +V   M +++ FM  LV  L  A + A LR  A PG  +  P +L  PRRVKP+L+   TAA      L      +K ++ +RADEDDVA LRD+ D+
Sbjct:    1 MEDSQREWAVKEIKEGIAKQSQGAHSQGLRRVQWYSGRGTTIKIRLPGLSFAVSGKNDEVLGVKSF-GTDETGAVLGVELKKKLTWQGLRQAETEFYLWQGSSQYPFCQVITDLQTGGAAYYSDGADEKGKVRVVRRVFVGMEKLYLFMAQLVSALP-ADIDAPLRSRADPGLPAGFPDELPVPRRVKPRLEP--TAAPELVGGLPHYAVAFKLLAEMRADEDDVANLRDLADW 230          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A2J7ZKQ1_9CHLO (Uncharacterized protein n=2 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZKQ1_9CHLO)

HSP 1 Score: 152 bits (384), Expect = 1.770e-41
Identity = 89/222 (40.09%), Postives = 125/222 (56.31%), Query Frame = 1
Query:   70 EKIKDGLRREL---GQHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAP--GSSMPQQLEEPRRVKPKLDGQRTAADAT--LTREQFFWKQMSIIRADEDDVACLRDVDDF 714
            E+IK+G+  +    G  +  R + W + R ITL      + F V  +ND++L V  Y   P  GA+LG+ELKK+L+WQG+RQAETEF +WQ+ S YPFCQ+ITD+  GG  +     D   + + Y+V  +M +++ FM  L+ GL       +L    P    S PQ+L EPRRVKP+L         +  L       K +S  RA+EDDVA LRDV D+
Sbjct:    2 EEIKEGISSKSVAGGSSREQRQVRWFNGRGITLTHRFGELSFDVKGKNDEVLCVASYGAGPL-GAVLGIELKKKLSWQGMRQAETEFYLWQSSSQYPFCQVITDMRIGGAYYSEGINDTGNMVVRYRVFNNMEQLYEFMAKLIYGLPKDLNDRLLPRADPKLSVSFPQELLEPRRVKPRLGRYEAMQQLSGGLPPGLAALKLISDKRAEEDDVANLRDVADY 222          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A150G9U0_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G9U0_GONPE)

HSP 1 Score: 139 bits (351), Expect = 2.480e-35
Identity = 89/197 (45.18%), Postives = 123/197 (62.44%), Query Frame = 1
Query:   28 WD-GGVEPALRPQYSEKIKDGLRREL-GQHQFPRDLV-WIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSG-LRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPG---SSMPQQLEEPRRVKPKLD 597
            WD   VE +LR    ++I++G+ R+  G H+  R  V W   R+ T+     G+ F VS +ND +L VK + GT + GA+LGV LKK+LT QGLRQAE +F +WQ  S YPFCQ+ITDL TGGVA+Y+   D  G LR++++V   M ++  FM  LV  L  A + A LR  A     ++ P++L EPRRVKP+ D
Sbjct:  134 WDCDTVEDSLREWAMKEIEEGMARQSQGAHRQGRQRVQWYSGRDNTIEIRFPGLRFAVSGKNDVVLGVKSF-GTEELGAVLGVVLKKKLTRQGLRQAEAQFYLWQCSSQYPFCQVITDLQTGGVAYYSDGFDQEGYLRVVFRVFVDMEKLHLFMAQLVNALP-ADIEAPLRPRAGPELPAAFPRELPEPRRVKPERD 328          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A835WAF4_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WAF4_CHLIN)

HSP 1 Score: 135 bits (341), Expect = 2.370e-33
Identity = 85/241 (35.27%), Postives = 126/241 (52.28%), Query Frame = 1
Query:   22 FDWDGGVEPALRPQYSEKIKDGLRRELG-------QHQFPRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGS---SMPQQLEEPRRVKPKLDGQRTAADATLTREQFFWKQMSIIRADEDDVACLRDVDDF 714
            F WD  V   +  + S  +   +++++G              + W + R I L      + + +  +ND++L V  + G    GA+LGVELKK+L+ QG+RQAETEF +WQ+ S YPFCQ+ITD+ TG   ++        L +  +V  SM  ++ FM GL+ GL  + L   LR  AP     S PQ+L  P+R+KP     R   DA +       K +S +R  EDD+A LRDV D+
Sbjct:  165 FIWDDAV---MEDRQSADVMVEIKKKVGPVSLQPSSSSHRAQVQWFNGRGIALTHRFGEMSYSIKGKNDEVLGVTSF-GQAATGAVLGVELKKKLSQQGVRQAETEFYLWQSSSQYPFCQVITDMKTGCAYYFEGINSKGRLVLRVRVFGSMGPLYDFMAGLINGLP-SDLNDQLRSRAPSGLPVSFPQELSVPQRIKPPQHAPRAELDAGVPPFASALKLISDMRDAEDDIANLRDVADW 400          
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Match: A0A8J4B1T4_9CHLO (Uncharacterized protein n=6 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B1T4_9CHLO)

HSP 1 Score: 134 bits (336), Expect = 1.770e-32
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 1
Query:   28 WDGGVEPALRPQYSEKIKDGLRRELGQ-----HQF-PRDLVWIDARNITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGLRQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLR-IMYKVLPSMTEVWRFMGGLVCGLDVAALTAVLRMDAPGS-SMPQQLEEPRRVKPKLD---GQRTAADA----TLTREQFFWKQMSIIRA-DEDDVACLRDVDDFGG 720
            WD  +   +  + SEK    +++ + +      +F P+ + W + R+ITLR+    + F VS +ND++L++  Y      GA+LG+ELKKRLT QG RQAE EF +WQ  S YPFCQ+ITD   GG+AFY    D  G + + Y+VL  M  V+ FM  L+ GL    L   LR ++     +P++   P R+KP+     G R   +A    T+  +    K +S ++  DEDD   + ++DD  G
Sbjct:  184 WDTDI---MEDKQSEKAMTQIKKGIAELTARSAEFRPQQVKWCNGRSITLRRRFGELPFKVSCKNDEVLVINSYDDGDVLGAVLGLELKKRLTLQGFRQAEVEFYLWQCYSQYPFCQIITDATNGGMAFYCGAVDDMGQKQVHYQVLEGMQNVYIFMAELIDGLP-DNLNGRLRCNSDFPVPVPRKFSRPSRIKPQFGHSAGVRRPQEAMGPDTMPPDAKVMKLLSAMQMEDEDDYDDVANMDDLVG 426          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|75049 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A836CCX2_9STRA4.050e-186100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZJ20_9STRA4.180e-15684.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMP2_9STRA2.520e-15583.67Uncharacterized protein n=5 Tax=Tribonema minus Ta... [more]
A0A836CLL8_9STRA3.620e-15485.89Uncharacterized protein n=4 Tax=Tribonema minus Ta... [more]
A0A835YWP1_9STRA5.900e-7552.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A150G7X1_GONPE1.340e-4744.87Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A2J7ZKQ1_9CHLO1.770e-4140.09Uncharacterized protein n=2 Tax=Tetrabaena sociali... [more]
A0A150G9U0_GONPE2.480e-3545.18Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A835WAF4_CHLIN2.370e-3335.27Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A8J4B1T4_9CHLO1.770e-3235.63Uncharacterized protein n=6 Tax=Volvox africanus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_52contigContig_52:828718..831683 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|75049|CE75048_52
Hectar predicted targeting categoryother localisation
TranscriptId75371
TrackFilteredModels1
ProteinId75049
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|75049gene_9982Tribonema minus UTEX_B_3156 geneContig_52 828718..831683 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9982_3exon_9982_3Tribonema minus UTEX_B_3156 exonContig_52 828718..829332 -
exon_9982_2exon_9982_2Tribonema minus UTEX_B_3156 exonContig_52 830444..830708 -
exon_9982_1exon_9982_1Tribonema minus UTEX_B_3156 exonContig_52 831655..831683 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_9982UTR3_9982Tribonema minus UTEX_B_3156 three_prime_UTRContig_52 828718..828870 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9982CDS_9982Tribonema minus UTEX_B_3156 CDSContig_52 831655..831683 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|75049Trimin1|75049|CE75048_52Tribonema minus UTEX_B_3156 polypeptideContig_52 828871..831683 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9982 ID=mRNA_9982|Name=jgi.p|Trimin1|75049|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=909bp|location=Sequence derived from alignment at Contig_52:828718..831683- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCATCAGAGACAGACAAATCTTTTGACTGGGATGGGGGAGTAGAGCCGGC
GCTACGTCCTCAATACTCGGAGAAGATCAAGGACGGACTTCGGCGTGAGC
TAGGGCAGCATCAGTTTCCGCGAGATCTGGTGTGGATTGATGCGCGCAAC
ATAACTCTCAGGAAGCACGTCAATGGCGTCCTCTTCCCTGTAAGCAGCAG
AAATGATCAGCTGCTGATCGTGAAGGACTATCACGGCACTCCACAAAACG
GAGCCATCCTGGGTGTGGAGCTGAAAAAGCGGCTTACATGGCAGGGCCTA
CGCCAGGCCGAAACAGAGTTTATTGTGTGGCAAGCCGAGTCCAACTACCC
GTTCTGCCAAATGATAACGGACCTCAACACGGGTGGAGTGGCGTTCTATG
CGTTGCCCGGCGATGGCTCTGGCCTGCGTATCATGTACAAGGTTCTTCCA
TCCATGACGGAAGTGTGGAGGTTTATGGGTGGGCTTGTTTGTGGGCTAGA
TGTAGCTGCGCTTACCGCAGTGCTGCGCATGGATGCCCCAGGCAGTAGCA
TGCCACAGCAGCTGGAGGAACCTCGTCGCGTCAAGCCCAAACTGGATGGC
CAACGGACTGCAGCAGATGCTACGCTCACGCGCGAGCAGTTCTTTTGGAA
GCAGATGTCGATCATACGTGCAGATGAGGATGATGTGGCGTGTCTGCGGG
ACGTAGACGATTTTGGAGGCAAGCCCTATCCTGATGGAGTCCCGTACCAT
TGGTGATGGCGTGTTCTGTGGCGCACACCGAAGTCCTCTACCCTTGAGGC
TCTGCCATTGATAGATGCGTAGTCTCATGTGCAGGAGCGCAACCCGTCGC
GGGTTGGCAGCAGCAAACACATAGTGATCTAGCCTGCAAACGCAGGACGC
AGCGGGGCT
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protein sequence of jgi.p|Trimin1|75049

>Trimin1|75049|CE75048_52 ID=Trimin1|75049|CE75048_52|Name=jgi.p|Trimin1|75049|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=252bp
PSETDKSFDWDGGVEPALRPQYSEKIKDGLRRELGQHQFPRDLVWIDARN
ITLRKHVNGVLFPVSSRNDQLLIVKDYHGTPQNGAILGVELKKRLTWQGL
RQAETEFIVWQAESNYPFCQMITDLNTGGVAFYALPGDGSGLRIMYKVLP
SMTEVWRFMGGLVCGLDVAALTAVLRMDAPGSSMPQQLEEPRRVKPKLDG
QRTAADATLTREQFFWKQMSIIRADEDDVACLRDVDDFGGKPYPDGVPYH
W*
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mRNA from alignment at Contig_52:828718..831683-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9982 ID=mRNA_9982|Name=jgi.p|Trimin1|75049|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2966bp|location=Sequence derived from alignment at Contig_52:828718..831683- (Tribonema minus UTEX_B_3156 )
CCATCAGAGACAGACAAATCTTTTGACTGGTGAGCAGCACTGAAATTTGC AACTACACTGCACACAAAATTTGTGATACAAGCTCAGGTAAACCTGAATT GCCACTTTGAATATATTCTGCGACAGTACTTGGAAGCTATGGCATATTTG TGTATTGTACACAGCGTTCAGGTCGAAATGGTGGCCCAACTTCTGTTTCA CTCTTGCGGACAGCGCCCACAGCATGAATTTGCCCTGCCATTTGTAGGTT GGATGAGAGGTGAGCACCAACATGATGCCGTGATTGCAAGGAAGCTCAAT TTTAGGCTGGCGGTCGCAGAAGTATAACCAAATTGCCTACAACAGTACAG CGCGTGTTGTGGACTGAAGTTGATTTTGATTGAAGTGCAGTGCGCGTTCT ATACTCGTAAGAATTGTGCAATGCCAAAATACGTCAAGTATCACAAGGGT TCATTGAGCTTGAGTGTAAAACGATGAAACTAGCGGCACCTGAAGGATTA GCTCAAGCACAACTTCCTGGGAGGCAAGCGGCAGGAAAGCCAGTCTTGTG TTCGCAATTCAATGTTCTCGATGGAAGGATCTGACCTGTGCTGCCAGATG TAAATCATAAACATACTTCATGTGATGAATACGTTCTGTATGTCTTTCAA TATGGACGTATGCCATTTTGTAGTACGAAGACGAAGTGCATGTTCTCACT GTATGGTCAACACATATAGTAAAAGCAGTGTGTGGATAAACGTTTATTTT GATGAACGCACACGTGAGCAATTTACTTCAGCGCGAACACTTGAAAGGTC AGGGTTGTCATTGGTGGCTCTAGCAGCGCATCACAGCAGCGGTCCTCTGG CTACCACTGTTGCCTCGCTTCATATTGTGAAGCTCTCACCTCTTCACTGT GTTGGCATTTTGTGGAGACTTCTGCATACTGATGATTGCTGTTTACATAC AATGTTTGCATACAATGATGTACAGGGATGGGGGAGTAGAGCCGGCGCTA CGTCCTCAATACTCGGAGAAGATCAAGGACGGACTTCGGCGTGAGCTAGG GCAGCATCAGTTTCCGCGAGATCTGGTGTGGATTGATGCGCGCAACATAA CTCTCAGGAAGCACGTCAATGGCGTCCTCTTCCCTGTAAGCAGCAGAAAT GATCAGCTGCTGATCGTGAAGGACTATCACGGCACTCCACAAAACGGAGC CATCCTGGGTGTGGAGCTGAAAAAGCGGCTTACATGGCAGGTACACCCTC TCAGCTGTTGCATCAACCATAAGGCATGAACCATGCTCATCGTCATTTCC ATGTTCGATGGCAGTGGTGCACTGGTGTGGTGCATGATGCAACGTTGATA ATTGTGCTCATGGCTGCATTCTTGGTTGCCTCAACGCAGGTACCACGGTG GTGTTTACAGAATTTTCAAATAGCGTGTTGCATGCCTTTCTACTGGCGAA TCGTGCGTGCAGCGCGCCATGAAGGCGTTCACTTAGGACTTCTGAATTTT CAGCAACCGGCACAGTTTTCTGCCACGCCGCTGAAGGTCTTTGGCTCCAT CAAGTCACCTGCTGCAGAATGTACTGCTGTCGACGTATCTCCTGCCTTGT AGTGCGATTGACCCACACGGCAAGCCGCAAGCACACGGCAAAGCTTGCGG CTTGCCGCGCCGCTACAGAGCACCTGGAAGCCCGACTGCTATTGCGCTTT GGACGCGAACTGCACATGGCTCGTCATGTGGAGACCATGGTGGCCATCAC TTCTCGACGCTGTCAACCTCGTTTGCAATCAAATGATGCCTGTAGCTGTC GCAGGTGGTGTGACATCCTGATTTACCGCGAGCAGTTGCGCGCTTGCCCA TGTGTCATGGCAGGCGATTTATGACCATGAAAGTGCCAGTCATGTCGCAA ATCGAGCTACATGCCGCAGCAGAAGCAAAGCTCGTATCTGATGTAGTTTG CACATGTCTTGCCTGCTTGTCTCAGCCTGATTGTTGGCTCAATCAACGCT TGCTATCACTGACGCTGCATGGCACTTGCTCATGTTGAGATGTAACAGGA AACGTAGAAGTCTGAGCTCATAGATAATGAAACAGAAAGCCACGTTGCAT TGCACTCGTGGCATTCCCTATGCTGTATAATGTGACCAGTTGACTGATCG CAGTAAGCAGTGAGTTGCCATGAAGCAGGCGGAATTTTTGTTTAAGACGG CACATTACATTAAGATTATTATGCCGCCAGGTTTGTGATTGCTCGTGTGA GTGGGTGGCCTTCTATGTCAAGGCAGCGAGGGCACTTTATTGGTGCAACC GTGGTGTTATCATTTAACCATGTTTTTTTGTGGTTTGGTTGCTGTGCACA GGGCCTACGCCAGGCCGAAACAGAGTTTATTGTGTGGCAAGCCGAGTCCA ACTACCCGTTCTGCCAAATGATAACGGACCTCAACACGGGTGGAGTGGCG TTCTATGCGTTGCCCGGCGATGGCTCTGGCCTGCGTATCATGTACAAGGT TCTTCCATCCATGACGGAAGTGTGGAGGTTTATGGGTGGGCTTGTTTGTG GGCTAGATGTAGCTGCGCTTACCGCAGTGCTGCGCATGGATGCCCCAGGC AGTAGCATGCCACAGCAGCTGGAGGAACCTCGTCGCGTCAAGCCCAAACT GGATGGCCAACGGACTGCAGCAGATGCTACGCTCACGCGCGAGCAGTTCT TTTGGAAGCAGATGTCGATCATACGTGCAGATGAGGATGATGTGGCGTGT CTGCGGGACGTAGACGATTTTGGAGGCAAGCCCTATCCTGATGGAGTCCC GTACCATTGGTGATGGCGTGTTCTGTGGCGCACACCGAAGTCCTCTACCC TTGAGGCTCTGCCATTGATAGATGCGTAGTCTCATGTGCAGGAGCGCAAC CCGTCGCGGGTTGGCAGCAGCAAACACATAGTGATCTAGCCTGCAAACGC AGGACGCAGCGGGGCT
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Coding sequence (CDS) from alignment at Contig_52:828718..831683-

>mRNA_9982 ID=mRNA_9982|Name=jgi.p|Trimin1|75049|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=756bp|location=Sequence derived from alignment at Contig_52:828718..831683- (Tribonema minus UTEX_B_3156 )
CCATCAGAGACAGACAAATCTTTTGACTGGGATGGGGGAGTAGAGCCGGC
GCTACGTCCTCAATACTCGGAGAAGATCAAGGACGGACTTCGGCGTGAGC
TAGGGCAGCATCAGTTTCCGCGAGATCTGGTGTGGATTGATGCGCGCAAC
ATAACTCTCAGGAAGCACGTCAATGGCGTCCTCTTCCCTGTAAGCAGCAG
AAATGATCAGCTGCTGATCGTGAAGGACTATCACGGCACTCCACAAAACG
GAGCCATCCTGGGTGTGGAGCTGAAAAAGCGGCTTACATGGCAGGGCCTA
CGCCAGGCCGAAACAGAGTTTATTGTGTGGCAAGCCGAGTCCAACTACCC
GTTCTGCCAAATGATAACGGACCTCAACACGGGTGGAGTGGCGTTCTATG
CGTTGCCCGGCGATGGCTCTGGCCTGCGTATCATGTACAAGGTTCTTCCA
TCCATGACGGAAGTGTGGAGGTTTATGGGTGGGCTTGTTTGTGGGCTAGA
TGTAGCTGCGCTTACCGCAGTGCTGCGCATGGATGCCCCAGGCAGTAGCA
TGCCACAGCAGCTGGAGGAACCTCGTCGCGTCAAGCCCAAACTGGATGGC
CAACGGACTGCAGCAGATGCTACGCTCACGCGCGAGCAGTTCTTTTGGAA
GCAGATGTCGATCATACGTGCAGATGAGGATGATGTGGCGTGTCTGCGGG
ACGTAGACGATTTTGGAGGCAAGCCCTATCCTGATGGAGTCCCGTACCAT
TGGTGA
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