mRNA_9883 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|175708
Unique NamemRNA_9883
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: A0A835ZE62_9STRA (L-allo-threonine aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE62_9STRA)

HSP 1 Score: 652 bits (1681), Expect = 1.010e-234
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1 
Query:    1 MARTCIRKSFTSAAAQRPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLLAVAPAPR 1128
            MARTCIRKSFTSAAAQRPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLLAVAPAPR
Sbjct:    1 MARTCIRKSFTSAAAQRPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLLAVAPAPR 376
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BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: A0A6H5L2V5_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2V5_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 2.670e-111
Identity = 196/363 (53.99%), Postives = 238/363 (65.56%), Query Frame = 1 
Query:   34 SAAAQRPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLLAVAPA 1122
            S A      D RSDT+TKPCK +R AM  A++GDDV+GEDP+V  LE+  AY+ GKE  L VPSGTMGNL+AVGAHC RGDE++LG  SH+F YEG GASA MG SY  VR   DG L + D+  A+R DD H PRS LLCLENT N  G   +  A + +        GLK+H+DGARL NAAV+       L+  ADS S+CLSKGLGAPVGSVLVGS  F+ +ARRLRK+LGGGMRQ+GV+AAAGLEA++NN++RLS+DH NAAALA GL A+RG+  +                            F   L  +HGVL+G GY   G T+RA+THLDV    VERA+ A R +LA A A
Sbjct:  147 SRATPTAAVDLRSDTMTKPCKRLRAAMAGAEVGDDVFGEDPTVARLEDCVAYLLGKEKGLLVPSGTMGNLIAVGAHCRRGDELILGDKSHIFQYEGAGASALMGVSYHTVRNAEDGGLEVADIETAVRGDDPHYPRSSLLCLENTQNLCGARAIAPARMAEMCAAGRHAGLKVHVDGARLWNAAVSLEVRPSELVSDADSVSVCLSKGLGAPVGSVLVGSEQFIYEARRLRKSLGGGMRQSGVIAAAGLEAVVNNYVRLSEDHDNAAALANGLGALRGISAERSPADTNAVYFQVTGMDAQA--------FVDALERDHGVLMGSGY-FGGSTIRAMTHLDVNREGVERAIEASRAVLADATA 500
[Close]
BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: A0A2D4C5R1_PYTIN (L-allo-threonine aldolase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5R1_PYTIN)

HSP 1 Score: 332 bits (852), Expect = 3.000e-109
Identity = 185/346 (53.47%), Postives = 234/346 (67.63%), Query Frame = 1 
Query:   70 SDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLL 1107
            SDTVT+P   MR+ +  A +GDDV+G DPSVN L+EYAA + GK AALFVPSGTMGNL+AVG HC RGDEI+LG  SH+F+YEG GASA+MG  +  VR + DGTLAL D+A A+R DD H PR+RL+ LENTHN  GG  LP  +L+    F   RGL+LH+DGARLANA+VA  T +  L+ GA+S S+CLSKGLGAPVGS++ GS  F+ +A+RLRK+LGGGMRQAGV+AAAG  AL + F RL++DH NA ALA GLA I G+                                   L  + G+L+GGGY  +G  +RAVT+L V  +D+   +AAVR ++
Sbjct:    3 SDTVTQPTPAMRDVIAAAPVGDDVFGSDPSVNALQEYAAELLGKPAALFVPSGTMGNLIAVGVHCRRGDEIILGDKSHIFMYEGAGASAYMGVGFHSVRNQSDGTLALEDLANAVRADDPHYPRTRLVALENTHNTCGGRVLPLEFLEQVEAFCRQRGLRLHVDGARLANASVALNTPIADLVSGANSVSLCLSKGLGAPVGSIIAGSEDFIYQAKRLRKSLGGGMRQAGVIAAAGKFALEHQFQRLAEDHENAKALAHGLAQIPGIEVDANNVDTNIVFFHVTTAAKHNAEE-----LVTALQQDKGILLGGGYW-NGEKVRAVTNLHVTASDIADTIAAVREIM 342
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BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: A0A5D6XWH6_9STRA (Beta_elim_lyase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWH6_9STRA)

HSP 1 Score: 329 bits (844), Expect = 6.780e-108
Identity = 184/347 (53.03%), Postives = 236/347 (68.01%), Query Frame = 1 
Query:   70 SDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLLA 1110
            SDTVT+P   MR A+  A +GDDVYG DPSVN L+ +AA + GK AALFVPSGTM NL+A+GAHC RGDEI++G  +H+F+YEG GASA++G     VR + DGTLAL D+ +A+R DD H PR+RL+ +ENTHN  GG  LP A++ +   F  D  LKLH+DGARLANA+VA   ++  L+ GADS S+CLSKGLGAPVGS+L GS  F+ +A+RLRK+LGGGMRQAG++AAAGL AL +   RL++DHANA ALA GLA I G+                                  +L+ + G+LVGGGY  +G  +RAVT+L V   DVE  +A+VR L+A
Sbjct:   13 SDTVTRPSDAMRRAIAAAPVGDDVYGTDPSVNRLQAHAAALLGKPAALFVPSGTMSNLIALGAHCNRGDEIIVGDKAHIFMYEGAGASAYLGVGLHTVRNQADGTLALADIRSAVRADDPHYPRTRLVAIENTHNTCGGRVLPLAFVREVEGFCRDASLKLHVDGARLANASVASGVALSDLVAGADSVSLCLSKGLGAPVGSILAGSEEFIYRAKRLRKSLGGGMRQAGIIAAAGLYALEHQLERLAEDHANAKALAHGLAKIPGI-----DVDENEVDTNIVFFHIAPDAKLSAAELVEKLSSDKGILVGGGYW-NGEKVRAVTNLHVSSQDVEYVVASVRELMA 353
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BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: A0A8K1FBA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBA4_PYTOL)

HSP 1 Score: 323 bits (829), Expect = 1.210e-105
Identity = 186/357 (52.10%), Postives = 233/357 (65.27%), Query Frame = 1 
Query:   40 AAQRPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLLA 1110
            +A RPV +  SDTVT+P   MR  +  A +GDDV+G DPSVN L++YAA + GKEAALFVPSGTM NL+AVGAHC RGDEI+LG  +H+  YEGGGASA+MG S+  V  + DGTL L D+  A+R DD H PRSRL+ LENT N  GG  L   Y +  A F  +  L+LHIDGARLANA+VA    +  L+ GADS S+CLSKGLGAPVGS+L G+  F+  A+RLRK+LGGGMRQ G++AA    AL + F RL+DDHANA  LA+GL+ I G+R                                 +L +E G+LVGGGY A G  +RAVT+L +   DVE  + ++R LLA
Sbjct:    2 SAARPVINLLSDTVTQPTLAMREVIATAVVGDDVFGADPSVNDLQQYAAELLGKEAALFVPSGTMANLIAVGAHCRRGDEIILGDKAHIVTYEGGGASAYMGVSFRTVPNQTDGTLRLEDLKDAIRGDDPHYPRSRLVALENTQNNCGGRVLSVEYTNQVAAFCKEHNLRLHIDGARLANASVALGVPLAELVRGADSVSLCLSKGLGAPVGSILAGTKDFIYHAKRLRKSLGGGMRQVGIIAAPAKFALEHQFDRLADDHANAKLLAQGLSQIPGIRLNVDEIDTNIVFFNLTTEAKLNALG-----LVTKLKEEKGILVGGGYWA-GERVRAVTNLHITKEDVEYTIQSIRELLA 352
[Close]
BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: K3WHL8_GLOUD (Beta_elim_lyase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHL8_GLOUD)

HSP 1 Score: 323 bits (828), Expect = 2.310e-105
Identity = 184/360 (51.11%), Postives = 236/360 (65.56%), Query Frame = 1 
Query:   34 SAAAQRPVSDFR--SDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLL 1107
            S AA+RP       SDTVT+P   MR A+  A +GDDVYG DPSVN L+++AA + GK+AAL+VPSGTM NL+A+GAHC RGDEI++G  +H+F+YEG GASA+MG     V+ + DGT+ L D+  A+R DD H PR+RL+ LENTHN  GG  LP  ++     F  D  LKLHIDGARLANA+VA    M  L+ GADS S+CLSKGLGAPVGS+L G+  F+  A+RLRK+LGGGMRQAGV+A AG  AL +   RL+DDHANA ALA GL+ I G+                                 +RL +E G+LVGGGY  +G  +RAVT+L +   D+  A+A++R L+
Sbjct:    7 STAAKRPAQALNMVSDTVTRPSDAMRRAIVAAPVGDDVYGTDPSVNELQQFAAQLLGKQAALYVPSGTMSNLIALGAHCRRGDEIIVGDKAHIFMYEGAGASAYMGVGLHTVKNQPDGTMKLADIQDAVRADDPHYPRTRLVALENTHNTCGGRVLPMDFIHQVEEFCQDAKLKLHIDGARLANASVASGIPMADLVAGADSVSLCLSKGLGAPVGSILAGTEEFIYNAKRLRKSLGGGMRQAGVIAVAGKFALEHQLERLADDHANAKALAHGLSQIPGI-----DVNEDDVGTNIVFFHITPDAKLDAATLVQRLDNEKGILVGGGYW-NGQKVRAVTNLHISAQDIAYAVASIRDLM 360
[Close]
BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: H3GFB2_PHYRM (Beta_elim_lyase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFB2_PHYRM)

HSP 1 Score: 322 bits (826), Expect = 3.120e-105
Identity = 187/353 (52.97%), Postives = 233/353 (66.01%), Query Frame = 1 
Query:   49 RPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLL 1107
            R + +F SDTVT P   MR  +  A++GD V+G DPSVN LE+ AA   GK AAL+VPSGTM NL+A+GAHC RGDE++ G  +H+FLYEGGGA+A+MG S   V  + DGTL+L D+  A+RDDD H PR+RL+ +ENT N  GG  LP +Y+ D  +F  +R L+LH+DGARLANA+VA    M  L+ GADS S+CLSKGLGAPVGS+L GS  F+  A RLRK+LGGGMRQAGV+A+AGL AL N F RLS+DH NA ALA GLA I GV                                 +RL  E G+LVG  Y ADG  +RAVT+L +   DVE A+A++  LL
Sbjct:    3 RTIVNFLSDTVTCPTAAMRQVIAAAEVGDAVFGADPSVNRLEKVAAERLGKAAALYVPSGTMSNLIAIGAHCRRGDEVICGDKAHIFLYEGGGANAYMGVSLHTVPNQPDGTLSLQDIHNAVRDDDPHYPRTRLVEIENTQNSCGGRVLPLSYIRDVEQFCLERDLRLHVDGARLANASVASGIPMDELVRGADSVSLCLSKGLGAPVGSILAGSEEFIHHATRLRKSLGGGMRQAGVIASAGLYALENQFERLSEDHVNAQALAHGLATIPGV-----DINPDTVDTNIVFFTLNSDAKLDAPTLVQRLETEKGLLVGA-Y-ADGNRVRAVTNLHISDRDVEYAVASIHALL 348
[Close]
BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: W2QYD2_PHYPN (Beta_elim_lyase domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=W2QYD2_PHYPN)

HSP 1 Score: 318 bits (816), Expect = 1.120e-103
Identity = 183/353 (51.84%), Postives = 231/353 (65.44%), Query Frame = 1 
Query:   49 RPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLL 1107
            R V +F SDTVT P   MR  +  A++GDDV+G DPSV  LE+ AA   GK AAL+VPSGTM NL+A+G HC RGDE++ G  +H+FLYEGGGASA+MG S   V  + DGTL + D+  A+RDDD H PR+RL+ +ENT N  GG  LP +Y+ +  +F  +R L+LH+DGARLANA+VA    M  L  GADS S+CLSKGLGAPVGS+L GS  F+  ARRLRK+LGGGMRQAG++A+AGL AL N F RL +DH NA ALA G+++I GV                                 ++L  E GVLVG  Y ADG  +RAVT+L +   DVE  +++VR LL
Sbjct:    6 RAVVNFLSDTVTCPTVGMRQVIAAAEVGDDVFGADPSVKRLEKVAAERLGKPAALYVPSGTMSNLIAIGTHCRRGDEVICGDKAHIFLYEGGGASAYMGVSLHTVPNQPDGTLDIKDIHNAVRDDDPHYPRTRLVEIENTQNTCGGRVLPLSYIREVEQFCQERDLRLHVDGARLANASVASGIPMDELARGADSVSLCLSKGLGAPVGSILAGSEEFIHHARRLRKSLGGGMRQAGIIASAGLYALENQFDRLEEDHVNAQALAHGISSIPGVE-----IDPSTVDTNIVFFTLTKDAKLDATTLVQKLGSEKGVLVGA-Y-ADGNRVRAVTNLHISAEDVEYTVSSVRALL 351
[Close]
BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: A0A6G0XNI5_9STRA (Beta_elim_lyase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNI5_9STRA)

HSP 1 Score: 317 bits (811), Expect = 6.360e-103
Identity = 180/346 (52.02%), Postives = 225/346 (65.03%), Query Frame = 1 
Query:   70 SDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLL 1107
            SDTVT+PC  MR AM  A +GDDV+G DP+V  L+  AA + GK AALFVPSGTMGNL++VG HC RGDE++LG  SH+F YEGGGASAF+G S   V  + DG+L L D+ AA+R+DD H PRS+L+ +ENTHN  GG  +P   +   +     RGLKLH+DGARLANA+V    S+  LL   D+ S+CLSKGLGAPVGS++ GS  F+ +A+RLRKA GGGMRQAG+LAAAGL AL +N  RL+ DH NA  LA+GLA I GV                               F   L +E+GV +GGGYG  G  +RA  HLDV   DV  AL +++ +L
Sbjct:   11 SDTVTQPCARMRQAMATALVGDDVHGTDPTVRELQREAAQLLGKPAALFVPSGTMGNLISVGVHCNRGDEVILGNKSHVFKYEGGGASAFLGVSMHTVPNQADGSLLLEDIEAAIREDDPHFPRSQLVVIENTHNTCGGRVVPTETVQSISALCERRGLKLHVDGARLANASVYLGQSLAELLAPVDTVSLCLSKGLGAPVGSIIAGSEDFIYQAKRLRKAFGGGMRQAGILAAAGLIAL-DNIGRLAVDHDNAQRLAKGLAKIPGV------VIDVDTVETNLVYFSLDPAAMSMNDFLSHLEEEYGVQLGGGYGKGGNQIRAALHLDVSEEDVVYALQSIKNVL 349
[Close]
BLAST of jgi.p|Trimin1|175708 vs. uniprot
Match: G4YJA8_PHYSP (Beta_elim_lyase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YJA8_PHYSP)

HSP 1 Score: 316 bits (809), Expect = 1.160e-102
Identity = 185/354 (52.26%), Postives = 228/354 (64.41%), Query Frame = 1 
Query:   46 QRPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGEDPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATSHMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRLLCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRTSMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMRQAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFARRLADEHGVLVGGGYGADGGTMRAVTHLDVGPADVERALAAVRVLL 1107
            QR   +F SDTVT P   MR  +  A++GD V+G DPSVN LE+ AA   GK AAL+VPSGTM NL+A+G HC RGDE + G  +H+FLYEGGGA+A+MG S   V  + DGTL L D+  A+RDDD H PR+RL+ +ENT N  GG  LP +Y+ D  +F  +R L+LH+DGARLANA+VA    M  L+ GADS S+CLSKGLGAPVGS+L GS  F+  A RLRK+LGGGMRQAG++A+AGL AL N F RL DDH NA ALA G++ I GV                                  +L  E GVLVG  Y ADG  +RAVT+L +   DVE  +AA+R LL
Sbjct:    2 QRAAVNFLSDTVTCPSAAMRQVIAAAEVGDAVFGADPSVNRLEKVAAERLGKAAALYVPSGTMSNLIAIGTHCRRGDEAICGDKAHIFLYEGGGANAYMGVSLHTVPNQPDGTLDLTDINNAVRDDDPHYPRTRLVEIENTQNSCGGRVLPLSYIRDVEKFCHERNLRLHVDGARLANASVASGIPMDELVRGADSVSLCLSKGLGAPVGSILAGSEEFIHHAMRLRKSLGGGMRQAGIIASAGLYALENQFDRLVDDHVNAKALAHGISTIPGVE-----IDPDTVDTNIVFFRLAPDAKLDATTLVHKLKTEKGVLVGA-Y-ADGNRVRAVTNLHISGQDVEDTVAAIRGLL 348
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175708 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZE62_9STRA1.010e-234100.00L-allo-threonine aldolase n=1 Tax=Tribonema minus ... [more]
A0A6H5L2V5_9PHAE2.670e-11153.99Beta_elim_lyase domain-containing protein n=2 Tax=... [more]
A0A2D4C5R1_PYTIN3.000e-10953.47L-allo-threonine aldolase n=1 Tax=Pythium insidios... [more]
A0A5D6XWH6_9STRA6.780e-10853.03Beta_elim_lyase domain-containing protein n=1 Tax=... [more]
A0A8K1FBA4_PYTOL1.210e-10552.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WHL8_GLOUD2.310e-10551.11Beta_elim_lyase domain-containing protein n=1 Tax=... [more]
H3GFB2_PHYRM3.120e-10552.97Beta_elim_lyase domain-containing protein n=1 Tax=... [more]
W2QYD2_PHYPN1.120e-10351.84Beta_elim_lyase domain-containing protein n=21 Tax... [more]
A0A6G0XNI5_9STRA6.360e-10352.02Beta_elim_lyase domain-containing protein n=1 Tax=... [more]
G4YJA8_PHYSP1.160e-10252.26Beta_elim_lyase domain-containing protein n=5 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_129contigContig_129:372632..375069 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|175708|e_gw1.129.103.1
BRITEko00000,ko00001,ko01000
KEGG rclassRC00312,RC00372
KEGG ReactionR00751,R06171
KEGG Pathwayko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230
KEGG koko:K01620
EC4.1.2.48
DescriptionL-allo-threonine aldolase activity
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2008@1|root,KOG1368@2759|Eukaryota
Evalue7.71e-114
Seed ortholog2880.D7FWM2
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionThreonine aldolase
Ec32 orthologEc-11_002460.1
TranscriptId176030
TrackFilteredModels1
ProteinId175708
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175708gene_9883Tribonema minus UTEX_B_3156 geneContig_129 372632..375069 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175708Trimin1|175708|e_gw1.129.103.1Tribonema minus UTEX_B_3156 polypeptideContig_129 372632..375069 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9883_6exon_9883_6Tribonema minus UTEX_B_3156 exonContig_129 372632..372889 -
exon_9883_5exon_9883_5Tribonema minus UTEX_B_3156 exonContig_129 372932..373051 -
exon_9883_4exon_9883_4Tribonema minus UTEX_B_3156 exonContig_129 373297..373487 -
exon_9883_3exon_9883_3Tribonema minus UTEX_B_3156 exonContig_129 373736..374073 -
exon_9883_2exon_9883_2Tribonema minus UTEX_B_3156 exonContig_129 374769..374841 -
exon_9883_1exon_9883_1Tribonema minus UTEX_B_3156 exonContig_129 374919..375069 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9883CDS_9883Tribonema minus UTEX_B_3156 CDSContig_129 374919..375069 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9883 ID=mRNA_9883|Name=jgi.p|Trimin1|175708|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1131bp|location=Sequence derived from alignment at Contig_129:372632..375069- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTCGCACATGCATTCGGAAAAGCTTTACTTCAGCTGCAGCACAGCG
GCCTGTATCTGATTTCAGATCCGATACTGTGACAAAGCCTTGCAAAAACA
TGCGCAATGCCATGTACCAGGCTCAGCTTGGGGACGACGTCTATGGCGAA
GATCCGAGCGTGAACACGCTGGAAGAGTATGCAGCTTACATTACCGGGAA
GGAGGCAGCCCTGTTTGTGCCAAGCGGCACCATGGGCAACCTCGTCGCGG
TCGGCGCGCACTGCGCGCGCGGCGACGAGATCGTCCTCGGCGCGACGAGC
CACATGTTCCTGTACGAGGGCGGCGGCGCGAGCGCGTTCATGGGCGCGTC
GTACGCGTGCGTGCGCGAGCGCGGCGACGGCACGCTCGCGCTGAACGACG
TGGCGGCGGCGCTGCGCGACGACGACGTGCACTGCCCGCGCTCGCGCCTC
CTGTGCCTCGAGAACACGCACAACAGGGCGGGCGGCGCGCCGCTGCCGCG
CGCGTACCTCGACGACGCCGCGCGCTTCGCCGCGGACCGCGGCTTGAAGC
TGCATATCGACGGCGCCAGGCTCGCCAACGCCGCCGTAGCCCAGCGCACC
TCCATGCGGCACCTCCTGGAGGGCGCCGACTCCGCGTCCATCTGCCTGAG
CAAGGGCCTGGGCGCGCCGGTGGGGTCCGTACTCGTGGGGAGCCCCGGCT
TTGTGGCGAAGGCGCGGCGGCTGCGCAAGGCGCTGGGGGGCGGCATGCGC
CAGGCTGGCGTGCTGGCCGCGGCGGGCCTCGAGGCGCTCATCAACAACTT
CCTGCGCCTGAGCGATGATCACGCCAACGCCGCGGCGCTCGCGCGCGGCC
TGGCGGCGATCCGCGGCGTGCGCCAGCAGCAGGAGCAGCGGCGCACCAAC
ATGGTGTACTTTGCGCTGGAGAGCGGCGGCGGCGGCAGCAGCGGCGCCGC
CGCGGCGGCGGCGTTCGCGCGGCGCCTCGCGGACGAGCACGGCGTGCTCG
TGGGCGGCGGCTACGGCGCGGACGGCGGCACGATGCGCGCGGTGACACAC
CTGGACGTGGGGCCCGCAGACGTGGAGCGCGCGCTCGCCGCAGTGCGCGT
GCTGCTGGCGGTGGCGCCTGCGCCACGCTAG
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protein sequence of jgi.p|Trimin1|175708

>Trimin1|175708|e_gw1.129.103.1 ID=Trimin1|175708|e_gw1.129.103.1|Name=jgi.p|Trimin1|175708|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=377bp
MARTCIRKSFTSAAAQRPVSDFRSDTVTKPCKNMRNAMYQAQLGDDVYGE
DPSVNTLEEYAAYITGKEAALFVPSGTMGNLVAVGAHCARGDEIVLGATS
HMFLYEGGGASAFMGASYACVRERGDGTLALNDVAAALRDDDVHCPRSRL
LCLENTHNRAGGAPLPRAYLDDAARFAADRGLKLHIDGARLANAAVAQRT
SMRHLLEGADSASICLSKGLGAPVGSVLVGSPGFVAKARRLRKALGGGMR
QAGVLAAAGLEALINNFLRLSDDHANAAALARGLAAIRGVRQQQEQRRTN
MVYFALESGGGGSSGAAAAAAFARRLADEHGVLVGGGYGADGGTMRAVTH
LDVGPADVERALAAVRVLLAVAPAPR*
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mRNA from alignment at Contig_129:372632..375069-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9883 ID=mRNA_9883|Name=jgi.p|Trimin1|175708|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2438bp|location=Sequence derived from alignment at Contig_129:372632..375069- (Tribonema minus UTEX_B_3156 )
ATGGCTCGCACATGCATTCGGAAAAGCTTTACTTCAGCTGCAGCACAGCG
GCCTGTATCTGATTTCAGATCCGATACTGTGACAAAGCCTTGCAAAAACA
TGCGCAATGCCATGTACCAGGCTCAGCTTGGGGACGACGTCTATGGCGAA
GGTAACGACGGCAATCACACGATACGCTGAGCATCAGGCTGAGGAGTCTG
ATGTATGCTGCTCCTGCCTTAACTGCAGATCCGAGCGTGAACACGCTGGA
AGAGTATGCAGCTTACATTACCGGGAAGGAGGCAGCCCTGTTTGTGCCAA
GGTCAGTGCTGTTGGCGTGAGCAAGACGGAGAAGCCATGCCTCAAGCGAG
GCTACCCAGCATTGCTCAGCAGCAGCACAGTCTTCATATCATACTAAGCT
AGAGACTGCAAAGGAGGCGACCATGCTGCTGTGTGCTTGGCTTGGCAACG
TGAGTGCGGCAGTGGCTGGGCTGCCCGTATGGTCAAGAACGTAAACAACA
TGTTCATGCAAATACCTCACTTCGACAGCTGGCTCTGGGCAGTGAGATGC
CACAGAATGCTTGACGCGTAATATATGTCTACTGTGGTTATGGTGGCACT
GTTTGACTCGTGGCCAATGACTGCAGCAGCGGTGACCACGGTTATTGGTG
GAAGGCACTTGCGGCTAACCATCCCTTGTCACCTAGAGCTCAACGATCTT
TTTGATTCGTTTTTCATATGGACTTGTGTGTTGATGCTGCATGCATCAGG
CTGCTGCTACATGGCTACTGCAACACCACTGAACATGCTCACAGTCGTTG
TTGCGGCAGCAGCTGCTTTTGCAGCCAAACACTTCGAGACTTTGCGCCAC
TGCCTTCTTTGGCACCATCAGCTAACCTCCCTCACTGTCAAACCGAGGAT
GCTGAACGCCTGGCACCAGTCACCTGCACATGGTAGCTCCCGCCGAATTA
ATAATGCCCCCCCCCCCCCCCCCCCCCGCGCCCCGCCCCCTTGCAGCGGC
ACCATGGGCAACCTCGTCGCGGTCGGCGCGCACTGCGCGCGCGGCGACGA
GATCGTCCTCGGCGCGACGAGCCACATGTTCCTGTACGAGGGCGGCGGCG
CGAGCGCGTTCATGGGCGCGTCGTACGCGTGCGTGCGCGAGCGCGGCGAC
GGCACGCTCGCGCTGAACGACGTGGCGGCGGCGCTGCGCGACGACGACGT
GCACTGCCCGCGCTCGCGCCTCCTGTGCCTCGAGAACACGCACAACAGGG
CGGGCGGCGCGCCGCTGCCGCGCGCGTACCTCGACGACGCCGCGCGCTTC
GCCGCGGACCGCGGCTTGAAGCTGCATATCGACGGTGCGTGCGCGCGTAC
GCGAGCGGCGCAGGGGGCATCTACCGTTTGCAGCAGCAGCAGTGATGCCG
CGCCTTTGAGGTCACCACAAGACGCGCGCTGACGGCTTGTCTTGGAGTCT
GCAGCAGCTGCATACATACTGTCCACTGCGCATAAATGGCCAATGCATAC
AGAGCACTGGTTGGCCAAAGCTGTCGCATTGCTGGCACCATTTCATCGTT
GCTACGCCTGTGTGCCTGCGCGTGCGCTGCAGGCGCCAGGCTCGCCAACG
CCGCCGTAGCCCAGCGCACCTCCATGCGGCACCTCCTGGAGGGCGCCGAC
TCCGCGTCCATCTGCCTGAGCAAGGGCCTGGGCGCGCCGGTGGGGTCCGT
ACTCGTGGGGAGCCCCGGCTTTGTGGCGAAGGCGCGGCGGCTGCGCAAGG
CGCTGGGGGGCGGCATGCGCCAGGTACGTTGCGCCGCAGCGAGCGTGCAT
ACATATGTGTGCGTCAAGTAGTTGGCATGCGCCCAATGGTCAGGATCATG
AAGTGCTCCAACAAAGCGCTGCAAGGCATGTGTGCATGCTGGTAGTGAGA
AGCGGGGTACGCACGGCGAGCGACGACGGTGCCGAGCGGACGCATCTGCA
CCGCAACCACAGCAGTGGCGCACGCAGCGTGACTTCTCCGCCGCCTTCCC
TGCGCATGCTATGTGCAGGCTGGCGTGCTGGCCGCGGCGGGCCTCGAGGC
GCTCATCAACAACTTCCTGCGCCTGAGCGATGATCACGCCAACGCCGCGG
CGCTCGCGCGCGGCCTGGCGGCGATCCGCGGCGTGCGCGTGCTCGGCGGC
GACAGTAGCGGCGACCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGCGGCG
CACCAACATGGTGTACTTTGCGCTGGAGAGCGGCGGCGGCGGCAGCAGCG
GCGCCGCCGCGGCGGCGGCGTTCGCGCGGCGCCTCGCGGACGAGCACGGC
GTGCTCGTGGGCGGCGGCTACGGCGCGGACGGCGGCACGATGCGCGCGGT
GACACACCTGGACGTGGGGCCCGCAGACGTGGAGCGCGCGCTCGCCGCAG
TGCGCGTGCTGCTGGCGGTGGCGCCTGCGCCACGCTAG
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Coding sequence (CDS) from alignment at Contig_129:372632..375069-

>mRNA_9883 ID=mRNA_9883|Name=jgi.p|Trimin1|175708|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1131bp|location=Sequence derived from alignment at Contig_129:372632..375069- (Tribonema minus UTEX_B_3156 )
ATGGCTCGCACATGCATTCGGAAAAGCTTTACTTCAGCTGCAGCACAGCG
GCCTGTATCTGATTTCAGATCCGATACTGTGACAAAGCCTTGCAAAAACA
TGCGCAATGCCATGTACCAGGCTCAGCTTGGGGACGACGTCTATGGCGAA
GATCCGAGCGTGAACACGCTGGAAGAGTATGCAGCTTACATTACCGGGAA
GGAGGCAGCCCTGTTTGTGCCAAGCGGCACCATGGGCAACCTCGTCGCGG
TCGGCGCGCACTGCGCGCGCGGCGACGAGATCGTCCTCGGCGCGACGAGC
CACATGTTCCTGTACGAGGGCGGCGGCGCGAGCGCGTTCATGGGCGCGTC
GTACGCGTGCGTGCGCGAGCGCGGCGACGGCACGCTCGCGCTGAACGACG
TGGCGGCGGCGCTGCGCGACGACGACGTGCACTGCCCGCGCTCGCGCCTC
CTGTGCCTCGAGAACACGCACAACAGGGCGGGCGGCGCGCCGCTGCCGCG
CGCGTACCTCGACGACGCCGCGCGCTTCGCCGCGGACCGCGGCTTGAAGC
TGCATATCGACGGCGCCAGGCTCGCCAACGCCGCCGTAGCCCAGCGCACC
TCCATGCGGCACCTCCTGGAGGGCGCCGACTCCGCGTCCATCTGCCTGAG
CAAGGGCCTGGGCGCGCCGGTGGGGTCCGTACTCGTGGGGAGCCCCGGCT
TTGTGGCGAAGGCGCGGCGGCTGCGCAAGGCGCTGGGGGGCGGCATGCGC
CAGGCTGGCGTGCTGGCCGCGGCGGGCCTCGAGGCGCTCATCAACAACTT
CCTGCGCCTGAGCGATGATCACGCCAACGCCGCGGCGCTCGCGCGCGGCC
TGGCGGCGATCCGCGGCGTGCGCCAGCAGCAGGAGCAGCGGCGCACCAAC
ATGGTGTACTTTGCGCTGGAGAGCGGCGGCGGCGGCAGCAGCGGCGCCGC
CGCGGCGGCGGCGTTCGCGCGGCGCCTCGCGGACGAGCACGGCGTGCTCG
TGGGCGGCGGCTACGGCGCGGACGGCGGCACGATGCGCGCGGTGACACAC
CTGGACGTGGGGCCCGCAGACGTGGAGCGCGCGCTCGCCGCAGTGCGCGT
GCTGCTGGCGGTGGCGCCTGCGCCACGCTAG
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