mRNA_9855 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: A0A836CL15_9STRA (RanBP2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL15_9STRA) HSP 1 Score: 244 bits (624), Expect = 4.180e-78 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1 Query: 1 MRHGEEDTVKQXXXXXXXXXXXXXXXKPASLKAATGGKVVGTRGRVLADKRTRDRVGADPTSVRQVWDKWLEKLQQXXXXXXXXXXXXXXXXXXXXXXXXXXAKQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLPEPAPLAPRSEXXXXXXXXXXXXXXXXXXXXXXXXPRPQAVEQPRPLAVSTGAAAVGLVGALGAXXXXXXXXXXXXXMQGDGWVCPQCTLLNGAVVLVCECCLAERPPHM 741 MRHGEEDTVKQXXXXXXXXXXXXXXXKPASLKAATGGKVVGTRGRVLADKRTRDRVGADPTSVRQVWDKWLEKLQQXXXXXXXXXXXXXXXXXXXXXXXXXXAKQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLPEPAPLAPRSEXXXXXXXXXXXXXXXXXXXXXXXXPRPQAVEQPRPLAVSTGAAAVGLVGALGAXXXXXXXXXXXXXMQGDGWVCPQCTLLNGAVVLVCECCLAERPPHM Sbjct: 1 MRHGEEDTVKQXXXXXXXXXXXXXXXKPASLKAATGGKVVGTRGRVLADKRTRDRVGADPTSVRQVWDKWLEKLQQXXXXXXXXXXXXXXXXXXXXXXXXXXAKQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLPEPAPLAPRSEXXXXXXXXXXXXXXXXXXXXXXXXPRPQAVEQPRPLAVSTGAAAVGLVGALGAXXXXXXXXXXXXXMQGDGWVCPQCTLLNGAVVLVCECCLAERPPHM 247
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: A0A835ZDS4_9STRA (Phosphotriesterase-related protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS4_9STRA) HSP 1 Score: 872 bits (2253), Expect = 0.000e+0 Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 1 Query: 1 MIPTVLGAVEASSITGAVLCREHLLRDASQGLQDDGDFSLDRLWQIKCDPTASRTNMRLVSVSEAVQEVQAFKDAGGTLIIDTTLRRHRRDAAGLAEISRRTGVAVVAAASCADAYPEEAALGQSYEDAAAADIQYQLLHGVAAALSGGSSTAGSGGEKIQCGVAVVELAGGGDIDAQQRLELERSQWDGAPAAPPYALAAAEVAQLRAAARAQCACAAACAGARPPLLVLVPPFAFAPAARAVLDVLRAVHADVVTATVLCGATAAAARADALRPLLSAGATLCFDAFGRAACDGGADAGPVLPGDAADAALVAALLSDAARGSSXXXXXXXXXAASGPSSAHGRSNIVNGHSGSSSSILGHGSXXXXXXXXGVLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGFPVQEPPP 1467 MIPTVLGAVEASSITGAVLCREHLLRDASQGLQDDGDFSLDRLWQIKCDPTASRTNMRLVSVSEAVQEVQAFKDAGGTLIIDTTLRRHRRDAAGLAEISRRTGVAVVAAASCADAYPEEAALGQSYEDAAAADIQYQLLHGVAAALSGGSSTAGSGGEKIQCGVAVVELAGGGDIDAQQRLELERSQWDGAPAAPPYALAAAEVAQLRAAARAQCACAAACAGARPPLLVLVPPFAFAPAARAVLDVLRAVHADVVTATVLCGATAAAARADALRPLLSAGATLCFDAFGRAACDGGADAGPVLPGDAADAALVAALLSDAARGSSXXXXXXXXXAASGPSSAHGRSNIVNGHSGSSSSILGHGSXXXXXXXXGVLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGFPVQEPPP Sbjct: 1 MIPTVLGAVEASSITGAVLCREHLLRDASQGLQDDGDFSLDRLWQIKCDPTASRTNMRLVSVSEAVQEVQAFKDAGGTLIIDTTLRRHRRDAAGLAEISRRTGVAVVAAASCADAYPEEAALGQSYEDAAAADIQYQLLHGVAAALSGGSSTAGSGGEKIQCGVAVVELAGGGDIDAQQRLELERSQWDGAPAAPPYALAAAEVAQLRAAARAQCACAAACAGARPPLLVLVPPFAFAPAARAVLDVLRAVHADVVTATVLCGATAAAARADALRPLLSAGATLCFDAFGRAACDGGADAGPVLPGDAADAALVAALLSDAARGSSXXXXXXXXXAASGPSSAHGRSNIVNGHSGSSSSILGHGSXXXXXXXXGVLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGFPVQEPPP 489
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: A0A662Y8Z7_9STRA (Phosphotriesterase-related protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8Z7_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 4.190e-15 Identity = 47/108 (43.52%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 1123 VLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGF 1446 +LLS V QR+ R GG GY +V PRL+R G A RG A+ LL W+ PP A + + C+ C FE IEGEY++KFAF+YC CLR H F Sbjct: 371 ILLSTNVHQRIQYRRYGGGGYTYVFEYFQPRLQRLGITVAQWDQLVRGNAVELLAWYVPPEAPPIPKNYLQCTICGNFFEPIEGEYFTKFAFIYCSTKCLRRHSRQKF 478
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: D0N4W7_PHYIT (Phosphotriesterase-related protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N4W7_PHYIT) HSP 1 Score: 82.8 bits (203), Expect = 1.620e-13 Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 1123 VLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGF 1446 +LLS V QR+ R GG GY ++ PR R G ++A R + LL W+ PP A + + CS CA FE IEGEY++KF F+YC CLR H F Sbjct: 257 LLLSTNVHQRIQYRRYGGGGYTYLFDHFKPRFLRRGVSEAQWEQIVRSNVVDLLAWYEPPEAPPIPKNYLQCSICANYFEPIEGEYFTKFTFIYCGTKCLRRHSRQKF 364
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: A0A485LDY2_9STRA (Phosphotriesterase-related protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDY2_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 6.480e-13 Identity = 47/108 (43.52%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 1123 VLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGF 1446 +L++ V+Q + R GG G H S RL AG T LSLL +TPPP +++ CS CA FE I GEY++KFAFVYC CLR HR AGF Sbjct: 289 LLVTSTVSQTIQYTRHGGGGMTHALTSGRARLAAAGVTADQWNAMTNP--LSLLQCYTPPPPAELPKDYLVCSICARPFEPIVGEYFTKFAFVYCSTKCLRKHRIAGF 394
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: W2PXT5_PHYPN (Phosphotriesterase-related protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2PXT5_PHYPN) HSP 1 Score: 79.0 bits (193), Expect = 4.370e-12 Identity = 44/113 (38.94%), Postives = 57/113 (50.44%), Query Frame = 1 Query: 1123 VLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGFPVQEP 1461 +LLS V QR+ R GG GY ++ RL R G ++A R + LL W+ PP A + + CS C FE IEGEY++KF F+YC CLR H F P Sbjct: 318 ILLSTNVHQRIQYRRYGGGGYTYLFEYFKHRLLRQGISEAQWDQIVRTNVVDLLAWYVPPEAPPIPKNYLQCSICEKYFEPIEGEYFTKFTFIYCGTKCLRRHSRQKFAPLPP 430
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: A0A329S0I0_9STRA (Phosphotriesterase-related protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S0I0_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.090e-11 Identity = 44/113 (38.94%), Postives = 56/113 (49.56%), Query Frame = 1 Query: 1123 VLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGFPVQEP 1461 +LLS V QR+ R GG GY ++ RL R G + A R + LL W+ PP A + + CS C FE IEGEY++KF F+YC CLR H F P Sbjct: 329 ILLSTNVHQRIQYRRYGGGGYTYLFEHFKHRLLRQGVSAAQWGLIMRENVVDLLAWYVPPEAPPIPKNYLQCSICEKYFEPIEGEYFTKFTFIYCGTKCLRRHSRQKFAPLPP 441
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: A0A067D4D8_SAPPC (Phosphotriesterase-related protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D4D8_SAPPC) HSP 1 Score: 76.6 bits (187), Expect = 1.920e-11 Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 1 Query: 1123 VLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGF-PVQEP 1461 VL++ V + R GG GY H+ S A R A + L+LL + PPP+ + + CS C AFE I GEY++KFAFVYC CLR HR A F P++EP Sbjct: 274 VLINSTVHFKTQYTRYGGGGYTHIFASFAARALTTADVRARV---LLHEPLALLAGYVPPPSAEIPKNYIDCSICKTAFEPIVGEYFTKFAFVYCSTKCLRKHRIANFAPLEEP 384
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: A0A484EDX9_BRELC (Phosphotriesterase-related protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDX9_BRELC) HSP 1 Score: 72.0 bits (175), Expect = 7.610e-10 Identity = 40/108 (37.04%), Postives = 53/108 (49.07%), Query Frame = 1 Query: 1123 VLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGF 1446 +LLS V QR+ R GG GY ++ + + G + A RG + L W+ PP + + CS C FE IEGEY+SKF F+YC CLR H F Sbjct: 321 LLLSTNVHQRIQYRRYGGGGYTYLFKYFKTYVLGQGVSAAQWDQIVRGNVVKLWAWYVPPEVPPIPKNYLQCSICEKHFEPIEGEYFSKFTFIYCGTKCLRRHSRQNF 428
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: A0A3M6VL32_9STRA (Phosphotriesterase-related protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL32_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.480e-9 Identity = 40/108 (37.04%), Postives = 52/108 (48.15%), Query Frame = 1 Query: 1123 VLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGF 1446 +LLS V QR GG GYA++ R+ R G R + LL W+ P + + CS C+ FE IEGEY++KFAF+YC CLR H F Sbjct: 337 MLLSTNVYQRTQYRCYGGGGYAYLFEHFTHRILREGVTATQWNQIVRTNVVDLLAWYVSPEEPPIPKNYQKCSICSNFFEPIEGEYFTKFAFIYCGTKCLRRHSRQKF 444
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Match: UPI000B4ADE5F (phosphotriesterase-related protein n=2 Tax=unclassified Kineosporia TaxID=2626061 RepID=UPI000B4ADE5F) HSP 1 Score: 67.4 bits (163), Expect = 1.640e-8 Identity = 48/119 (40.34%), Postives = 60/119 (50.42%), Query Frame = 1 Query: 4 IPTVLGAVEASSITGAVLCREHLLRDASQGLQ-------DDGDFSL-----DRLWQIKCDPTASRTNMRLVSVSEAVQEVQAFKDAGGTLIIDTTLRRHRRDAAGLAEISRRTGVAVVA 324 + TVLG V ++ G L EH+L D + D D + D LW ++ DP A+ N RL V AV EVQ F D GG I++ T RD GL E+SRRTGV VVA Sbjct: 16 VETVLGPVPVDAL-GVTLTHEHILNDVTSWAHRTSSPGWDPEDLAHRPVTEDILWDLRQDPFANLDNCRLDDVEVAVAEVQRFADLGGGTIVEATGLGIGRDLEGLREVSRRTGVHVVA 133 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
BLAST of jgi.p|Trimin1|352721 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9855 ID=mRNA_9855|Name=jgi.p|Trimin1|352721|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=744bp|location=Sequence derived from alignment at Contig_129:258025..259550- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGACACGGCGAAGAGGACACTGTGAAGCAGGAGGATGGCGGCGGCGGback to top protein sequence of jgi.p|Trimin1|352721 >Trimin1|352721|estExt_Genemark1.C_Ctg_1290036 ID=Trimin1|352721|estExt_Genemark1.C_Ctg_1290036|Name=jgi.p|Trimin1|352721|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=248bp MRHGEEDTVKQEDGGGGSAGGGGGRRKPASLKAATGGKVVGTRGRVLADKback to top mRNA from alignment at Contig_129:258025..259550- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9855 ID=mRNA_9855|Name=jgi.p|Trimin1|352721|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1526bp|location=Sequence derived from alignment at Contig_129:258025..259550- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_129:258025..259550- >mRNA_9855 ID=mRNA_9855|Name=jgi.p|Trimin1|352721|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=744bp|location=Sequence derived from alignment at Contig_129:258025..259550- (Tribonema minus UTEX_B_3156 )back to top |